CF832198
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_UREPA (50S ribosomal protein L14 OS=Ureaplasma parvum GN=rplN PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 45/116 (38.79%), Postives = 68/116 (58.62%), Query Frame = -2 Query: 313 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 648 ADNTGAK + +I V G G R S VGD+V+ +VKK P + ++ AVIVR +K RR+ G+ + F++NA V++ +GS I GP+ +E D + +IAS A ++ Sbjct: 11 ADNTGAKEVGVIKVLG--GSKKRYAS--VGDIVVVSVKKATPAGLIAKGQMAKAVIVRTKKSIRRESGLLIRFDENACVLIKEDKTPRGSRIFGPVAREIRDRGYTKIASLAPEVL 122
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_UREP2 (50S ribosomal protein L14 OS=Ureaplasma parvum serovar 3 (strain ATCC 27815 / 27 / NCTC 11736) GN=rplN PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 45/116 (38.79%), Postives = 68/116 (58.62%), Query Frame = -2 Query: 313 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 648 ADNTGAK + +I V G G R S VGD+V+ +VKK P + ++ AVIVR +K RR+ G+ + F++NA V++ +GS I GP+ +E D + +IAS A ++ Sbjct: 11 ADNTGAKEVGVIKVLG--GSKKRYAS--VGDIVVVSVKKATPAGLIAKGQMAKAVIVRTKKSIRRESGLLIRFDENACVLIKEDKTPRGSRIFGPVAREIRDRGYTKIASLAPEVL 122
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_TREDE (50S ribosomal protein L14 OS=Treponema denticola GN=rplN PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 46/111 (41.44%), Postives = 63/111 (56.76%), Query Frame = -2 Query: 352 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP-DLRKK--VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 675 + V +N ADN+GAK + I V G G R A +GD+++ VK+ P + KK V AVIVR K +RR DG ++ F+DNA VIV+ KG I GP+ +E D Sbjct: 2 IQVETRLNVADNSGAKLVECIKVIG--GSKRRY--AGIGDIIVVAVKEALPTSVIKKGTVEKAVIVRVSKEYRRPDGTYIRFDDNACVIVDDNKNPKGKRIFGPVARELRD 108
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_STRTD (50S ribosomal protein L14 OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=rplN PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 44/116 (37.93%), Postives = 66/116 (56.90%), Query Frame = -2 Query: 313 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD-LWPRIASAANAIV 648 ADN+GA+ + I V G GR A +GD+++ATVK+ P K V+ AVIVR + RR DG ++ F+DNA VI+ +G+ I GP+ +E + + RI S A ++ Sbjct: 11 ADNSGAREILTIKVLGGSGR----KFANIGDVIVATVKQATPGGAVKKGDVVKAVIVRTKTGARRSDGSYIKFDDNAAVIIRDDKTPRGTRIFGPVARELREGGYMRIVSLAPEVL 122
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_STRT2 (50S ribosomal protein L14 OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=rplN PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 44/116 (37.93%), Postives = 66/116 (56.90%), Query Frame = -2 Query: 313 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD-LWPRIASAANAIV 648 ADN+GA+ + I V G GR A +GD+++ATVK+ P K V+ AVIVR + RR DG ++ F+DNA VI+ +G+ I GP+ +E + + RI S A ++ Sbjct: 11 ADNSGAREILTIKVLGGSGR----KFANIGDVIVATVKQATPGGAVKKGDVVKAVIVRTKTGARRSDGSYIKFDDNAAVIIRDDKTPRGTRIFGPVARELREGGYMRIVSLAPEVL 122
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_STRT1 (50S ribosomal protein L14 OS=Streptococcus thermophilus (strain CNRZ 1066) GN=rplN PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 44/116 (37.93%), Postives = 66/116 (56.90%), Query Frame = -2 Query: 313 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD-LWPRIASAANAIV 648 ADN+GA+ + I V G GR A +GD+++ATVK+ P K V+ AVIVR + RR DG ++ F+DNA VI+ +G+ I GP+ +E + + RI S A ++ Sbjct: 11 ADNSGAREILTIKVLGGSGR----KFANIGDVIVATVKQATPGGAVKKGDVVKAVIVRTKTGARRSDGSYIKFDDNAAVIIRDDKTPRGTRIFGPVARELREGGYMRIVSLAPEVL 122
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_LEUCK (50S ribosomal protein L14 OS=Leuconostoc citreum (strain KM20) GN=rplN PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 47/116 (40.52%), Postives = 64/116 (55.17%), Query Frame = -2 Query: 313 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 648 ADN+GA+ + I V G GR A VGDM++ATVK+ P K V+ AVIVR RR DG ++ F++NA VIV G+ I GP+ +E D + RI S A ++ Sbjct: 11 ADNSGAREILTIKVLGGSGR----KFAGVGDMIVATVKQAIPGGNVKKGDVVKAVIVRTVSDVRRADGSYINFDENAAVIVKDDKSPVGTRIFGPVARELRDSDYMRIVSLAPEVL 122
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_GEOSM (50S ribosomal protein L14 OS=Geobacter sp. (strain M21) GN=rplN PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 40/102 (39.22%), Postives = 63/102 (61.76%), Query Frame = -2 Query: 361 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 657 ++ ADN+GAK L+ I V G G R A +GD+++A+VK+ P+ + K V+ AV+VR K R DG ++ F+ N+GV++N E G+ I GP+ +E Sbjct: 8 LDVADNSGAKKLFCIKVLG--GSKRRY--AGIGDIIVASVKEALPNSKVKKGDVVKAVVVRTAKAVGRPDGSYIRFDTNSGVVINNAKEPVGTRIFGPVARE 105
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_GEOKA (50S ribosomal protein L14 OS=Geobacillus kaustophilus GN=rplN PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 39/102 (38.24%), Postives = 61/102 (59.80%), Query Frame = -2 Query: 352 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 648 ADN+GA+ + +I V G GR A +GD+V+ATVK P + +V+ AV+VR ++ RR DG ++ F++NA VI+ +G+ I GP+ +E D Sbjct: 11 ADNSGAREVLVIKVLGGSGRRY----ANIGDVVVATVKDATPGGVVKKGQVVKAVVVRTKRGVRRPDGSYIRFDENACVIIRDDKSPRGTRIFGPVARELRD 108
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_GEOBB (50S ribosomal protein L14 OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=rplN PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 40/102 (39.22%), Postives = 63/102 (61.76%), Query Frame = -2 Query: 361 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 657 ++ ADN+GAK L+ I V G G R A +GD+++A+VK+ P+ + K V+ AV+VR K R DG ++ F+ N+GV++N E G+ I GP+ +E Sbjct: 8 LDVADNSGAKKLFCIKVLG--GSKRRY--AGIGDIIVASVKEALPNSKVKKGDVVKAVVVRTAKAVGRPDGSYIRFDTNSGVVINNAKEPVGTRIFGPVARE 105 The following BLAST results are available for this feature:
BLAST of CF832198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 411
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832198 ID=CF832198; Name=CF832198; organism=Citrus sinensis; type=EST; length=733bpback to top |