CF832198

Overview
NameCF832198
Unique NameCF832198
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length733
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_ENTFA (50S ribosomal protein L14 OS=Enterococcus faecalis GN=rplN PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11
Identity = 38/99 (38.38%), Postives = 60/99 (60.61%), Query Frame = -2
Query:  361 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 648
            ADN+GA+ +  I V G  GR     +A +GD+++ATVK+  P     + +V+ AVIVR +   RR DG ++ F++NA VI+      +G+ I GP+ +E
Sbjct:   11 ADNSGAREILTIKVLGGSGR----KTANIGDVIVATVKQATPGGVVKKGEVVKAVIVRTKSGARRADGSYIKFDENAAVIIRDDKSPRGTRIFGPVARE 105          
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_DESPS (50S ribosomal protein L14 OS=Desulfotalea psychrophila GN=rplN PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11
Identity = 40/102 (39.22%), Postives = 60/102 (58.82%), Query Frame = -2
Query:  361 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 657
            +N ADN+GAK +  I V G     +R   A +GD+++ TVK+  P  + K   VM AV+VR  K  RR D  ++ F++NA V++   GE  G+ I GP+ +E
Sbjct:    8 LNVADNSGAKKVLCIRVLGG----SRKRYASIGDVIVVTVKEAIPHAKVKKGDVMKAVVVRTAKENRRPDDTWVKFDENAAVMLGASGEPVGTRIFGPVARE 105          
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_BACST (50S ribosomal protein L14 OS=Bacillus stearothermophilus GN=rplN PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11
Identity = 39/102 (38.24%), Postives = 61/102 (59.80%), Query Frame = -2
Query:  352 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 648
            ADN+GA+ + +I V G  GR      A +GD+V+ATVK   P     + +V+ AV+VR ++  RR DG ++ F++NA VI+      +G+ I GP+ +E  D
Sbjct:   11 ADNSGAREVLVIKVLGGSGRRY----ANIGDVVVATVKDATPGGVVKKGQVVKAVVVRTKRGVRRPDGSYIRFDENACVIIRDDKSPRGTRIFGPVARELRD 108          
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_BACHK (50S ribosomal protein L14 OS=Bacillus thuringiensis subsp. konkukian GN=rplN PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11
Identity = 39/102 (38.24%), Postives = 59/102 (57.84%), Query Frame = -2
Query:  352 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 648
            ADN+GA+ L  I V G  GR      A +GD+++ATVK+  P     +  V+ AV+VR +   RR DG ++ F++NA VI+      +G+ I GP+ +E  D
Sbjct:   11 ADNSGARELLTIKVLGGSGR----KYANIGDIIVATVKQATPGGVVKKGDVVKAVVVRTKSGARRPDGSYIKFDENAAVIIKDDKSPRGTRIFGPVARELRD 108          
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_BACCZ (50S ribosomal protein L14 OS=Bacillus cereus (strain ZK / E33L) GN=rplN PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11
Identity = 39/102 (38.24%), Postives = 59/102 (57.84%), Query Frame = -2
Query:  352 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 648
            ADN+GA+ L  I V G  GR      A +GD+++ATVK+  P     +  V+ AV+VR +   RR DG ++ F++NA VI+      +G+ I GP+ +E  D
Sbjct:   11 ADNSGARELLTIKVLGGSGR----KYANIGDIIVATVKQATPGGVVKKGDVVKAVVVRTKSGARRPDGSYIKFDENAAVIIKDDKSPRGTRIFGPVARELRD 108          
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_BACCR (50S ribosomal protein L14 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rplN PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11
Identity = 39/102 (38.24%), Postives = 59/102 (57.84%), Query Frame = -2
Query:  352 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 648
            ADN+GA+ L  I V G  GR      A +GD+++ATVK+  P     +  V+ AV+VR +   RR DG ++ F++NA VI+      +G+ I GP+ +E  D
Sbjct:   11 ADNSGARELLTIKVLGGSGR----KYANIGDIIVATVKQATPGGVVKKGDVVKAVVVRTKSGARRPDGSYIKFDENAAVIIKDDKSPRGTRIFGPVARELRD 108          
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_BACCQ (50S ribosomal protein L14 OS=Bacillus cereus (strain Q1) GN=rplN PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11
Identity = 39/102 (38.24%), Postives = 59/102 (57.84%), Query Frame = -2
Query:  352 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 648
            ADN+GA+ L  I V G  GR      A +GD+++ATVK+  P     +  V+ AV+VR +   RR DG ++ F++NA VI+      +G+ I GP+ +E  D
Sbjct:   11 ADNSGARELLTIKVLGGSGR----KYANIGDIIVATVKQATPGGVVKKGDVVKAVVVRTKSGARRPDGSYIKFDENAAVIIKDDKSPRGTRIFGPVARELRD 108          
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_BACCN (50S ribosomal protein L14 OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=rplN PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11
Identity = 39/102 (38.24%), Postives = 59/102 (57.84%), Query Frame = -2
Query:  352 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 648
            ADN+GA+ L  I V G  GR      A +GD+++ATVK+  P     +  V+ AV+VR +   RR DG ++ F++NA VI+      +G+ I GP+ +E  D
Sbjct:   11 ADNSGARELLTIKVLGGSGR----KYANIGDIIVATVKQATPGGVVKKGDVVKAVVVRTKSGARRPDGSYIRFDENAAVIIKDDKSPRGTRIFGPVARELRD 108          
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_BACC7 (50S ribosomal protein L14 OS=Bacillus cereus (strain AH187) GN=rplN PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11
Identity = 39/102 (38.24%), Postives = 59/102 (57.84%), Query Frame = -2
Query:  352 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 648
            ADN+GA+ L  I V G  GR      A +GD+++ATVK+  P     +  V+ AV+VR +   RR DG ++ F++NA VI+      +G+ I GP+ +E  D
Sbjct:   11 ADNSGARELLTIKVLGGSGR----KYANIGDIIVATVKQATPGGVVKKGDVVKAVVVRTKSGARRPDGSYIKFDENAAVIIKDDKSPRGTRIFGPVARELRD 108          
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_BACC4 (50S ribosomal protein L14 OS=Bacillus cereus (strain B4264) GN=rplN PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11
Identity = 39/102 (38.24%), Postives = 59/102 (57.84%), Query Frame = -2
Query:  352 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 648
            ADN+GA+ L  I V G  GR      A +GD+++ATVK+  P     +  V+ AV+VR +   RR DG ++ F++NA VI+      +G+ I GP+ +E  D
Sbjct:   11 ADNSGARELLTIKVLGGSGR----KYANIGDIIVATVKQATPGGVVKKGDVVKAVVVRTKSGARRPDGSYIKFDENAAVIIKDDKSPRGTRIFGPVARELRD 108          
The following BLAST results are available for this feature:
BLAST of CF832198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 411
Match NameE-valueIdentityDescription
RL14_ENTFA9.112e-1138.3850S ribosomal protein L14 OS=Enterococcus faecalis... [more]
RL14_DESPS9.112e-1139.2250S ribosomal protein L14 OS=Desulfotalea psychrop... [more]
RL14_BACST9.112e-1138.2450S ribosomal protein L14 OS=Bacillus stearothermo... [more]
RL14_BACHK9.112e-1138.2450S ribosomal protein L14 OS=Bacillus thuringiensi... [more]
RL14_BACCZ9.112e-1138.2450S ribosomal protein L14 OS=Bacillus cereus (stra... [more]
RL14_BACCR9.112e-1138.2450S ribosomal protein L14 OS=Bacillus cereus (stra... [more]
RL14_BACCQ9.112e-1138.2450S ribosomal protein L14 OS=Bacillus cereus (stra... [more]
RL14_BACCN9.112e-1138.2450S ribosomal protein L14 OS=Bacillus cereus subsp... [more]
RL14_BACC79.112e-1138.2450S ribosomal protein L14 OS=Bacillus cereus (stra... [more]
RL14_BACC49.112e-1138.2450S ribosomal protein L14 OS=Bacillus cereus (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01H16_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01H16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832198 ID=CF832198; Name=CF832198; organism=Citrus sinensis; type=EST; length=733bp
TTTTTTTTTTTTTTTTTAAAAAAAACCAACCAATTAGTAACCTTATTTAT
AAAAACAAAACTTTAAAACGTTTAAAACAAAATCAATATTTCCTCTTAAA
AGAACAAAATTCTTTGGAAATTAAACACAAATTAAATTCATTCTACAATT
AGAATAGGTAGAAAATCTGAAATCTCCTTGTATCTGTCTAGCAATAGCCA
ATAGAGGAACAACCACAACACTCATCAGTAGGAAATGATCCCAATGATAT
TAACAGACCCTACGGTCACCTACCAAACTAAGGCCAAAAAAATCCCTTAA
AACCCCCACTCAAACAATAGCATTGGCAGCACTTGCAATTCTTGGCCACA
GATCAGCACACTCCTTACCAATTGGTCCAGTTATGGCAGATCCTTTCATT
TCCCCCTTAGGGTTGACGATGACACCAGCATTATCTTCAAAGTACATGAA
GACGCCGTCCTTTCGGCGCCAGGGCTTGCGCTGGCGGACGATGACAGCTG
GCATGACCTTTTTCCTCAGATCGGGCTTTCCTTTCTTGACAGTGGCCATG
ACCATGTCGCCGACGCAGGCCGACGGAAGTCGGTTGAGTCTCCCTTTGAT
TCCTTTCACCGATATTATGTAGAGATTCTTCGCACCCGTGTTGTCGGCAC
AGTTCACCGTCGCCGCCACCGGCAGACCCAGCGACATCCTGAACTTGTTC
CCCGCCGACCCTCCCCTTCCTCGCTTCGACATT
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