CF832198
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_PYRKO (50S ribosomal protein L14P OS=Pyrococcus kodakaraensis GN=rpl14p PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.352e-30 Identity = 69/141 (48.94%), Postives = 97/141 (68.79%), Query Frame = -2 Query: 313 MSKRGRGGSAG-NKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 732 M+K+G G + G + R + LP+ A + ADN+GAK + II V G KG RL +A VGDMV+ATVKKG+PD+R +V+ AV+VRQRK +RR DG+ + FEDNA IV P+G +G+ I G I +E A+ W R+ S A+ ++ Sbjct: 1 MAKKGAGATRGISPVRPTRALPIGAYLKVADNSGAKVIQIIGVVGYKGTRRRLAAAGVGDMVVATVKKGRPDMRHQVVRAVVVRQRKEYRRLDGMRVKFEDNAAAIVTPEGVPRGTEIRGAIAREAAERWVRLGSIASIVL 141
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_METMP (50S ribosomal protein L14P OS=Methanococcus maripaludis GN=rpl14p PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.352e-30 Identity = 64/120 (53.33%), Postives = 84/120 (70.00%), Query Frame = -2 Query: 316 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 675 LP A + CADNTGAK L +I+VK G + RLP+ VG MV +VKKG P++RK+V+PA+I+RQ+K +RR DG + FEDNA VIV P+G KGS I GP+ KE A+ WP ++ A I Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYVGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYRRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVSRLAKII 131
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_METM7 (50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl14p PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.766e-30 Identity = 64/120 (53.33%), Postives = 84/120 (70.00%), Query Frame = -2 Query: 316 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 675 LP A + CADNTGAK L II+VK G + RLP+ VG MV +VKKG P++RK+V+PA+I+RQ+K ++R DG + FEDNA VIV P+G KGS I GP+ KE A+ WP ++ A I Sbjct: 12 LPNGARLVCADNTGAKELEIIAVKNYTGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVSRLAKII 131
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_META3 (50S ribosomal protein L14P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl14p PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.766e-30 Identity = 65/120 (54.17%), Postives = 84/120 (70.00%), Query Frame = -2 Query: 316 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 675 LP A + CADNTGAK L II+VKG KG RLP+ VG +V +VKKG P++RK+V+PA+I+RQ+K +RR DG + FEDNA VIV P+G KGS I GP+ KE A+ W ++ A I Sbjct: 12 LPNGARLICADNTGAKELEIIAVKGYKGVARRLPAGGVGSLVFVSVKKGTPEMRKQVLPAIIIRQKKEYRRPDGSRVKFEDNAAVIVTPEGSPKGSEIKGPVAKEAAERWAGVSRLAKII 131
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_METM6 (50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl14p PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.306e-30 Identity = 63/120 (52.50%), Postives = 84/120 (70.00%), Query Frame = -2 Query: 316 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 675 LP A + CADNTGAK L +I+VK G + RLP+ VG MV +VKKG P++RK+V+PA+I+RQ+K ++R DG + FEDNA VIV P+G KGS I GP+ KE A+ WP ++ A I Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYTGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVSRLAKII 131
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_METS5 (50S ribosomal protein L14P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl14p PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.012e-30 Identity = 63/115 (54.78%), Postives = 84/115 (73.04%), Query Frame = -2 Query: 313 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 657 VN +DN+GAK IISV G +G L R+P A VGD+VM +V+KG PD+RK+ AV++RQR P+RR DG ++ F+DNA VIVNP G KG+ I GP+ +E A+ WP++AS A IV Sbjct: 24 VNVSDNSGAKEAMIISVFGYRGALRRVPYANVGDLVMVSVRKGAPDVRKQKFKAVVIRQRMPFRRPDGTWISFDDNAVVIVNPDGTAKGTEIRGPVAREAAERWPKVASLATLIV 138
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_METM5 (50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl14p PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.012e-30 Identity = 63/120 (52.50%), Postives = 84/120 (70.00%), Query Frame = -2 Query: 316 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 675 LP A + CADNTGAK L +I+VK G + RLP+ VG MV +VKKG P++RK+V+PA+I+RQ+K ++R DG + FEDNA VIV P+G KGS I GP+ KE A+ WP ++ A I Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYVGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVSRLAKII 131
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_IGNH4 (50S ribosomal protein L14P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rpl14p PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.012e-30 Identity = 67/134 (50.00%), Postives = 91/134 (67.91%), Query Frame = -2 Query: 313 SAGNKFRMSL--GLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 708 ++ NK R + GL V + V DN+GAK II V G GRL R+P A VGDMV+ TVKKG P++R +V+ A++VRQRKP+RR DG ++ FEDNA VIV+ G +GS I GP+ +E + WPRI + A+ +V Sbjct: 4 ASANKSRRKVVTGLQVGSYVKVTDNSGAKVAMIIGVPGYHGRLRRIPPAGVGDMVVVTVKKGTPEMRHQVVRAIVVRQRKPFRRPDGTWVAFEDNAVVIVSEDGTPRGSEIRGPVAREAVERWPRIGNVASIVV 137
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_SULSO (50S ribosomal protein L14P OS=Sulfolobus solfataricus GN=rpl14p PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.495e-29 Identity = 64/130 (49.23%), Postives = 88/130 (67.69%), Query Frame = -2 Query: 313 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 702 G++ ++ L + VN ADN+G K II V G +G L R+P A + DMVM ++KKG P++RK+ AVIVRQR P+RR DG ++ FEDNA VI+NP G KG+ + GPI +E A+ WP+IAS A +V Sbjct: 9 GSRKGLTPALQHYSVVNVADNSGGKEAMIIGVYGYRGVLRRVPFANIADMVMVSIKKGTPEVRKQKFRAVIVRQRMPYRRPDGTWISFEDNAVVIINPDGTPKGTEVRGPIAREAAERWPKIASLATLVV 138
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_ARCFU (50S ribosomal protein L14P OS=Archaeoglobus fulgidus GN=rpl14p PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.330e-29 Identity = 66/121 (54.55%), Postives = 86/121 (71.07%), Query Frame = -2 Query: 313 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 675 LP A + CADNTGA+ L II+VKG KG R P+A VGD+V+ TVKKG P++RK+V AVIVRQRK +RR DG + FEDNA VI N +GE +GS I G + +E A+ + +I + A+ IV Sbjct: 12 LPTGARLVCADNTGARELEIIAVKGYKGVRRRYPAAGVGDIVVVTVKKGTPEIRKQVHYAVIVRQRKEYRRPDGTRVKFEDNAAVITNERGEPRGSEIRGAVAREAAERFSKIGTIASVIV 132 The following BLAST results are available for this feature:
BLAST of CF832198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 411
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832198 ID=CF832198; Name=CF832198; organism=Citrus sinensis; type=EST; length=733bpback to top |