CF832199
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832199 vs. ExPASy Swiss-Prot
Match: RK14_PHYPA (50S ribosomal protein L14, chloroplastic OS=Physcomitrella patens GN=rpl14 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.098e-13 Identity = 39/102 (38.24%), Postives = 64/102 (62.75%), Query Frame = 3 Query: 78 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 374 +N ADN+GA+ L I + G R A +GD+++A VK+ P++ + +V+ AV+VR K +RK+G + F+DNA VI+N +G KG+ + GP+ +E Sbjct: 8 LNVADNSGARKLMCIQILGASNR----KYAHIGDIIIAVVKEAIPNMPLKKSEVVRAVVVRTCKELKRKNGTIIQFDDNAAVIINQEGNPKGTRVFGPVARE 105
BLAST of CF832199 vs. ExPASy Swiss-Prot
Match: RL14_RENSM (50S ribosomal protein L14 OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=rplN PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.740e-13 Identity = 45/102 (44.12%), Postives = 62/102 (60.78%), Query Frame = 3 Query: 87 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 383 ADNTGAK + I V G GR A +GD+++ATVK P K V+ AVIVR +K RR DG ++ F++NA VI+ G+ +G+ I GP+G+E D Sbjct: 11 ADNTGAKEILAIRVLGGSGRRY----AGIGDVIVATVKDAIPGGNVKKGDVVKAVIVRTKKERRRADGSYIKFDENAAVILKNDGDPRGTRIFGPVGRELRD 108
BLAST of CF832199 vs. ExPASy Swiss-Prot
Match: RL14_FUSNN (50S ribosomal protein L14 OS=Fusobacterium nucleatum subsp. nucleatum GN=rplN PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.740e-13 Identity = 44/102 (43.14%), Postives = 63/102 (61.76%), Query Frame = 3 Query: 78 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 374 +N ADN+GAK L +I V G G R +GD+V+A+VK+ P K ++ AVIVR RK RR DG ++ F+DNAGV++N E + + I GP+ +E Sbjct: 8 LNVADNSGAKKLMVIRVLG--GSRKRFGK--IGDIVVASVKEAIPGGNVKKGDIVKAVIVRTRKETRRDDGSYIKFDDNAGVVINNNNEPRATRIFGPVARE 105
BLAST of CF832199 vs. ExPASy Swiss-Prot
Match: RL14_DESVV (50S ribosomal protein L14 OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=rplN PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.740e-13 Identity = 45/108 (41.67%), Postives = 64/108 (59.26%), Query Frame = 3 Query: 60 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 374 + V +T+ ADN+GAK + I V G R A VGD++M +VK+ P + K VM AVIVR K RR DG ++ F+ NA V++N +GE G+ I GP+ +E Sbjct: 2 IQVESTLQVADNSGAKKVACIKVLGGSHRRY----ATVGDIIMVSVKEAMPHCKVKKGDVMQAVIVRTAKEVRRADGSYIKFDSNAAVLLNKQGEPVGTRIFGPVARE 105
BLAST of CF832199 vs. ExPASy Swiss-Prot
Match: RL14_DESVH (50S ribosomal protein L14 OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=rplN PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.740e-13 Identity = 45/108 (41.67%), Postives = 64/108 (59.26%), Query Frame = 3 Query: 60 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 374 + V +T+ ADN+GAK + I V G R A VGD++M +VK+ P + K VM AVIVR K RR DG ++ F+ NA V++N +GE G+ I GP+ +E Sbjct: 2 IQVESTLQVADNSGAKKVACIKVLGGSHRRY----ATVGDIIMVSVKEAMPHCKVKKGDVMQAVIVRTAKEVRRADGSYIKFDSNAAVLLNKQGEPVGTRIFGPVARE 105
BLAST of CF832199 vs. ExPASy Swiss-Prot
Match: RL14_CHLP8 (50S ribosomal protein L14 OS=Chlorobaculum parvum (strain NCIB 8327) GN=rplN PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.740e-13 Identity = 44/102 (43.14%), Postives = 62/102 (60.78%), Query Frame = 3 Query: 87 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 383 ADN+GAK + I V G GR A +GD +M TVK P+ +K V AV+VR K RRKDG ++ F++NA V++N +GE +G+ I GP+ +E D Sbjct: 11 ADNSGAKKVRCIHVFGGTGRRY----AALGDQIMVTVKAAVPNGVVKKKDVCKAVVVRCAKEQRRKDGSYIRFDENAVVLLNAQGEPRGTRIFGPVARELRD 108
BLAST of CF832199 vs. ExPASy Swiss-Prot
Match: RL14_ARTS2 (50S ribosomal protein L14 OS=Arthrobacter sp. (strain FB24) GN=rplN PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.740e-13 Identity = 45/102 (44.12%), Postives = 62/102 (60.78%), Query Frame = 3 Query: 87 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 383 ADNTGAK + I V G GR A +GD+++ATVK P K V+ AVIVR +K RR DG ++ F++NA VI+ G+ +G+ I GP+G+E D Sbjct: 11 ADNTGAKEILTIRVLGGSGRRY----AGIGDVIVATVKDAIPGGNVKKGDVVKAVIVRTKKERRRADGSYIKFDENAAVILKNDGDPRGTRIFGPVGRELRD 108
BLAST of CF832199 vs. ExPASy Swiss-Prot
Match: RL14_ARTCA (50S ribosomal protein L14 OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=rplN PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.740e-13 Identity = 45/102 (44.12%), Postives = 62/102 (60.78%), Query Frame = 3 Query: 87 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 383 ADNTGAK + I V G GR A +GD+++ATVK P K V+ AVIVR +K RR DG ++ F++NA VI+ G+ +G+ I GP+G+E D Sbjct: 11 ADNTGAKEILTIRVLGGSGRRY----AGIGDVIVATVKDAIPGGNVKKGDVVKAVIVRTKKERRRADGSYIKFDENAAVILKNDGDPRGTRIFGPVGRELRD 108
BLAST of CF832199 vs. ExPASy Swiss-Prot
Match: RL14_ARTAT (50S ribosomal protein L14 OS=Arthrobacter aurescens (strain TC1) GN=rplN PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.740e-13 Identity = 45/102 (44.12%), Postives = 62/102 (60.78%), Query Frame = 3 Query: 87 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 383 ADNTGAK + I V G GR A +GD+++ATVK P K V+ AVIVR +K RR DG ++ F++NA VI+ G+ +G+ I GP+G+E D Sbjct: 11 ADNTGAKEILTIRVLGGSGRRY----AGIGDVIVATVKDAIPGGNVKKGDVVKAVIVRTKKERRRADGSYIKFDENAAVILKNDGDPRGTRIFGPVGRELRD 108
BLAST of CF832199 vs. ExPASy Swiss-Prot
Match: RK14_SACOF (50S ribosomal protein L14, chloroplastic OS=Saccharum officinarum GN=rpl14 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.740e-13 Identity = 43/119 (36.13%), Postives = 71/119 (59.66%), Query Frame = 3 Query: 78 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 422 +N ADN+GA+ L I V G G A +GD+++A +K P + R +V+ AVIVR RK ++ DG+ + ++DNA VI++ KG KG+ + G + +E +L + +I S A ++ Sbjct: 8 LNVADNSGARKLMCIRVIGAAGNQRY---ARIGDVIIAVIKDAVPQMPLERSEVIRAVIVRTRKEFKGDDGIIIRYDDNAAVIIDQKGNPKGTRVFGAVAEELRELNYTKIVSLAPEVL 123 The following BLAST results are available for this feature:
BLAST of CF832199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 440
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832199 ID=CF832199; Name=CF832199; organism=Citrus sinensis; type=EST; length=660bpback to top |