CF832199
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832199 vs. ExPASy Swiss-Prot
Match: RL14_METS3 (50S ribosomal protein L14P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl14p PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.310e-33 Identity = 66/125 (52.80%), Postives = 92/125 (73.60%), Query Frame = 3 Query: 48 MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 422 +S LP+ AT+ C DNTGA+ + IISVKG KG RL A VGD+V+A+VKKG D+R++V+ AV++RQ+K + R DG+ + FEDNA VI+ P+G +KGS + GP+ KE AD WP + SAA+ +V Sbjct: 8 VSKALPIGATLQCVDNTGAREIQIISVKGFKGVRRRLDVAGVGDLVVASVKKGTADMRREVVNAVVIRQKKEYMRADGLRVKFEDNAAVIITPEGILKGSEVRGPVAKEAADRWPSVGSAASILV 132
BLAST of CF832199 vs. ExPASy Swiss-Prot
Match: RL14_METJA (50S ribosomal protein L14P OS=Methanocaldococcus jannaschii GN=rpl14p PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.442e-32 Identity = 70/121 (57.85%), Postives = 85/121 (70.25%), Query Frame = 3 Query: 60 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 422 LPV A CADNTGAK + II+V+ KG RLP+A VGDMV+ TVKKG P++RK+V+PAV++RQRK RR DG + F DNA VIV P G KGS I GP+ KE A+ WP IA A I+ Sbjct: 12 LPVGARCICADNTGAKEVEIIAVRNYKGVARRLPTARVGDMVIVTVKKGTPEMRKQVLPAVVIRQRKEIRRPDGTRVKFADNAVVIVTPDGNPKGSDIKGPVAKEAAERWPGIARIAKIII 132
BLAST of CF832199 vs. ExPASy Swiss-Prot
Match: RL14_PYRFU (50S ribosomal protein L14P OS=Pyrococcus furiosus GN=rpl14p PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.708e-31 Identity = 73/141 (51.77%), Postives = 97/141 (68.79%), Query Frame = 3 Query: 3 MSKRGRGGSAG-NKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 422 M+K+G G + G + R + LPV A + ADN+GAK + II V G RL SA VGDMV+ATVKKG+PD+R +V+ AVI+RQRK +RR DG+ + FEDNA VIV P+G +G+ I GP+ +E A+ W RI S A+ IV Sbjct: 1 MAKKGAGATRGVSAVRPTRALPVGAYLTVADNSGAKVIQIIGVVEYHGTRRRLASAGVGDMVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRVKFEDNAAVIVTPEGVPRGTEIRGPVAREAAERWVRIGSIASIIV 141
BLAST of CF832199 vs. ExPASy Swiss-Prot
Match: RL14_PYRHO (50S ribosomal protein L14P OS=Pyrococcus horikoshii GN=rpl14p PE=3 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 4.970e-31 Identity = 70/141 (49.65%), Postives = 97/141 (68.79%), Query Frame = 3 Query: 3 MSKRGRGGSAG-NKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 422 M+K+G G + G + R + +P+ A + ADN+GAK + +I V G RL SA VGDMV+ATVKKG+PD+R +V+ AVI+RQRK +RR DG+ + FEDNA VIV P+G +G+ I GP+ +E A+ W RI S A+ IV Sbjct: 1 MAKKGAGATRGISPVRPTRAIPIGAYLTVADNSGAKVIQVIGVVEYHGTRRRLASAGVGDMVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRVKFEDNAAVIVTPEGVPRGTEIRGPVAREAAEKWVRIGSIASIIV 141
BLAST of CF832199 vs. ExPASy Swiss-Prot
Match: RL14_PYRAB (50S ribosomal protein L14P OS=Pyrococcus abyssi GN=rpl14p PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.970e-31 Identity = 71/141 (50.35%), Postives = 96/141 (68.09%), Query Frame = 3 Query: 3 MSKRGRGGSAG-NKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 422 M+K+G G + G R + +PV A + ADN+GAK + +I V G RL SA VGDMV+ATVKKG+PD+R +V+ AVI+RQRK +RR DG+ + FEDNA VIV P+G +G+ I GP+ +E A+ W RI S A+ IV Sbjct: 1 MAKKGAGATRGITPVRPTRAIPVGAYLTVADNSGAKVIQVIGVVEYHGTRRRLASAGVGDMVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRIKFEDNAAVIVTPEGVPRGTEIRGPVAREAAERWVRIGSIASIIV 141
BLAST of CF832199 vs. ExPASy Swiss-Prot
Match: RL14_METVS (50S ribosomal protein L14P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl14p PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.491e-31 Identity = 64/120 (53.33%), Postives = 85/120 (70.83%), Query Frame = 3 Query: 60 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 419 LP A + CADNTGAK L +I+VK G + RLPSA VG +V +VKKG P++RK+V+PA+I+RQ+K ++R DG + FEDNA VIV P+G KGS I GP+ KE A+ WP ++ A I Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYSGTVRRLPSAGVGQIVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSDIKGPVSKEAAERWPGVSRLAKII 131
BLAST of CF832199 vs. ExPASy Swiss-Prot
Match: RL14_METVA (50S ribosomal protein L14P OS=Methanococcus vannielii GN=rpl14p PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.491e-31 Identity = 64/120 (53.33%), Postives = 85/120 (70.83%), Query Frame = 3 Query: 60 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 419 LP A + CADNTGAK L +I+VK G + RLPSA VG +V +VKKG P++RK+V+PA+I+RQ+K ++R DG + FEDNA VIV P+G KGS I GP+ KE A+ WP ++ A I Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYSGTVRRLPSAGVGQIVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSDIKGPVSKEAAERWPGVSRLAKII 131
BLAST of CF832199 vs. ExPASy Swiss-Prot
Match: RL14_CENSY (50S ribosomal protein L14P OS=Cenarchaeum symbiosum GN=rpl14p PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.491e-31 Identity = 72/140 (51.43%), Postives = 97/140 (69.29%), Query Frame = 3 Query: 12 RGRGGSAG-NKFR--MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 422 R RG + G +FR ++ LPV A V CADN+GAK L II V+ K R++RLP+A VGD V VKKG +LRK+V AVI+RQ+ P RR +GV + FEDNA V+ P+GEMKG+ I GP+ E ++ WPR+A+ A+ +V Sbjct: 5 RSRGKAKGVEEFRPYVTRALPVGARVTCADNSGAKVLEIIMVQKAKTRVSRLPAAAVGDYVNVVVKKGPAELRKQVHGAVIIRQKYPVRRLNGVRVAFEDNAAVLTTPEGEMKGTDIKGPVAAEASEKWPRLANLASMVV 144
BLAST of CF832199 vs. ExPASy Swiss-Prot
Match: RL14_KORCO (50S ribosomal protein L14P OS=Korarchaeum cryptofilum (strain OPF8) GN=rpl14p PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.477e-31 Identity = 67/130 (51.54%), Postives = 88/130 (67.69%), Query Frame = 3 Query: 33 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 422 G K +++ GLPV A + CADNTGAK L II V G KGR +R+P+A VGDMV VK+GK DL K A++VRQR P+RRK+G ++ FEDNA V+VN G +GS GPI KE + WP ++ + +V Sbjct: 12 GVKPKITHGLPVRARLKCADNTGAKLLMIIGVHGYKGRKDRVPTASVGDMVTVVVKRGKYDLMHKPFKAIVVRQRMPYRRKNGQWVVFEDNAAVLVNDDGTPRGSEFRGPIAKEAIERWPSLSVISAQVV 141
BLAST of CF832199 vs. ExPASy Swiss-Prot
Match: RL14_SULTO (50S ribosomal protein L14P OS=Sulfolobus tokodaii GN=rpl14p PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.107e-30 Identity = 66/130 (50.77%), Postives = 89/130 (68.46%), Query Frame = 3 Query: 33 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 422 G++ ++ GL TV ADN+GAK II + G KG L R+P A + D+VM +V+KG P++RK+ AVIVRQR P+RR DG ++ FEDNA VIVNP G KG+ I GPI KE A+ WP++AS A ++ Sbjct: 12 GSRKGLTPGLQHYTTVTVADNSGAKEAVIIGIYGYKGVLRRIPFANIADLVMVSVRKGTPEVRKQKFKAVIVRQRMPFRRPDGTWIAFEDNAVVIVNPDGTPKGTEIRGPIAKEAAERWPKVASIATMVI 141 The following BLAST results are available for this feature:
BLAST of CF832199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 440
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832199 ID=CF832199; Name=CF832199; organism=Citrus sinensis; type=EST; length=660bpback to top |