CF832247

Overview
NameCF832247
Unique NameCF832247
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length476
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1145 contig Csv1_Contig1145:14..489. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 9.998e-17
Identity = 43/91 (47.25%), Postives = 59/91 (64.84%), Query Frame = -1
Query:  204 SVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNAN 476
            S L  LD  TP  F NDY+ NL +  GLL SDQELF+    D+   V+NF+S+  AF  +F  +M++MGNL  LTGT G+IR  C ++N++
Sbjct:  233 SSLAPLDTMTPTVFGNDYYKNLLSQKGLLHSDQELFNNGSTDST--VSNFASSSAAFTSAFTAAMVKMGNLGPLTGTSGQIRLTCWKLNSS 321          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 2.227e-16
Identity = 43/87 (49.43%), Postives = 58/87 (66.67%), Query Frame = -1
Query:  210 LTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 470
            L+  D++TP+ FDN Y+ NL+   GLL SDQ+LF+  G  T   V  +S+N   F   F  +MI+MGNLS LTGT G+IR+NCR+ N
Sbjct:  232 LSPFDVTTPNKFDNAYYINLRNKKGLLHSDQQLFN--GVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTNCRKTN 316          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.227e-16
Identity = 42/87 (48.28%), Postives = 58/87 (66.67%), Query Frame = -1
Query:  210 LTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 470
            L+ LD+++   FDN YF NL  N GLL SDQ LFS+    +  +V  ++ ++  FFE FA SMI+MG +S LTG+ GEIR  CR++N
Sbjct:  250 LSELDINSAGRFDNSYFKNLIENMGLLNSDQVLFSS-NEQSRELVKKYAEDQEEFFEQFAESMIKMGKISPLTGSSGEIRKKCRKIN 335          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER5_ARATH (Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 2.909e-16
Identity = 44/87 (50.57%), Postives = 56/87 (64.37%), Query Frame = -1
Query:  210 LTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 470
            L  LDL TP+ FDN+Y+ NL    GLL +DQ LF + GA T  IV+ +S N + F   FA +MI+MGN+  LTG+ GEIR  C  VN
Sbjct:  236 LAALDLVTPNSFDNNYYKNLMQKKGLLVTDQVLFGS-GASTDGIVSEYSKNRSKFAADFATAMIKMGNIEPLTGSNGEIRKICSFVN 321          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PERX_LUPPO (Peroxidase (Fragment) OS=Lupinus polyphyllus PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 6.481e-16
Identity = 41/87 (47.13%), Postives = 56/87 (64.37%), Query Frame = -1
Query:  210 LTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 470
            L  LD  TP+ FDN+Y+ +L +N GLL SDQ LF+    DT+  V  +S+N   FF  FA ++++M  +S LTG  GEIR NCR +N
Sbjct:   74 LAPLDSLTPNRFDNNYYKDLVSNRGLLHSDQVLFNGGSQDTL--VRTYSTNNVKFFSDFAAAIVKMSKISPLTGIAGEIRKNCRVIN 158          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 8.464e-16
Identity = 42/89 (47.19%), Postives = 56/89 (62.92%), Query Frame = -1
Query:  210 SVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 476
            + L  LD  TP+ FDN+Y+ NL    GLL+SDQ LF T GA T  IV  +S N + F   F+ +MI+MG++  LTG+ G+IR  C  VN
Sbjct:  228 TTLAPLDQVTPNSFDNNYYRNLMQKKGLLESDQVLFGT-GASTDSIVTEYSRNPSRFASDFSAAMIKMGDIQTLTGSDGQIRRICSAVN 315          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER2_HORVU (Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 8.464e-16
Identity = 45/94 (47.87%), Postives = 58/94 (61.70%), Query Frame = -1
Query:  180 LDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNLSTRSSS 461
            LD+ TPD FDN Y+ +L A  GL +SDQ L   P   T  +   FS N+ AFFE FA SM +M N+ +LTGT+GEIR+NC   N    ++R  S
Sbjct:   72 LDVRTPDVFDNKYYFDLIARQGLFKSDQGLIDHP--TTKRMATRFSLNQGAFFEQFARSMTKMSNMDILTGTKGEIRNNCAVPNRRVRTSRPPS 163          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.886e-15
Identity = 42/87 (48.28%), Postives = 55/87 (63.22%), Query Frame = -1
Query:  210 LTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 470
            L  LD++T   FDN+YF NL    GLL SDQ LF+  G  T  IV  +S+N ++F   F  +MI+MG++S LTG+ GEIR  C R N
Sbjct:  240 LAPLDVTTAASFDNNYFKNLMTQRGLLHSDQVLFN--GGSTDSIVRGYSNNPSSFNSDFTAAMIKMGDISPLTGSSGEIRKVCGRTN 324          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 3.216e-15
Identity = 40/85 (47.06%), Postives = 57/85 (67.06%), Query Frame = -1
Query:  210 NLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 464
            NLD+ +PD FD+ ++  L +  GLL SDQ LF+    D++ I   +S N  AF+  FA +MI+MG++S LTG+ G+IR NCRR N
Sbjct:  234 NLDVRSPDRFDHGFYKQLLSKKGLLTSDQVLFNNGPTDSLVIA--YSHNLNAFYRDFARAMIKMGDISPLTGSNGQIRQNCRRPN 316          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 4.201e-15
Identity = 41/87 (47.13%), Postives = 56/87 (64.37%), Query Frame = -1
Query:  210 LTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 470
            L  LD+++   FDN YF NL A  GLL SDQ LF+  G  T  IV  +S++ ++F   FA +MI+MG++S LTG+ GEIR  C + N
Sbjct:  212 LAPLDINSATSFDNSYFKNLMAQRGLLHSDQVLFN--GGSTDSIVRGYSNSPSSFNSDFAAAMIKMGDISPLTGSSGEIRKVCGKTN 296          
The following BLAST results are available for this feature:
BLAST of CF832247 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
PER42_MAIZE9.998e-1747.25Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER1_ARAHY2.227e-1649.43Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PER14_ARATH2.227e-1648.28Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PER5_ARATH2.909e-1650.57Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 ... [more]
PERX_LUPPO6.481e-1647.13Peroxidase (Fragment) OS=Lupinus polyphyllus PE=2 ... [more]
PER4_ARATH8.464e-1647.19Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PER2_HORVU8.464e-1647.87Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV... [more]
PER52_ARATH1.886e-1548.28Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER67_ARATH3.216e-1547.06Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PERP7_BRARA4.201e-1547.13Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01I21_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01I21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832247 ID=CF832247; Name=CF832247; organism=Citrus sinensis; type=EST; length=476bp
TTTTTTTTTTTTTTTTTCCAACGGGCTCATAATTTTATTCAGACCCTGAA
AATATTGTTAGGACAAACACGAGACAAGGTACATGAGTTTGTTACCCACA
AACTCTCAACAGCAAAACTACTTCACACAGTTTTATTTTATGCTTTCATG
ATTTAGATAGAGCTGACCAAACCGCCATCTGATGATGATCTGGTTGATAA
ATTGTTTGCATTAACCCTTCTGCAGTTTGACCTGATCTCTCCTTGAGTCC
CTGTTAGAAGGCTTAAATTCCCCATTCTGATCATAGAAACCGCAAAGCTT
TCAAAGAAAGCAGTTTCGTTGCTGCTAAAGTTGTTGACAATGGGAATGGT
ATCGGCGCCGGGTGTCGAAAACAGCTCTTGATCACTCTGTAAAAGGCCAT
TGTTAGCTTGAAGATTGGAGAAATAATCGTTGTCAAAACCATCCGGTGTT
GAGAGATCAAGATTCGTTAGGACGCT
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