CF832247

Overview
NameCF832247
Unique NameCF832247
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length476
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1145 contig Csv1_Contig1145:14..489. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 8.759e-13
Identity = 37/87 (42.53%), Postives = 52/87 (59.77%), Query Frame = -1
Query:  210 LTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 470
            ++ LDL++P  FDN YF  L    GLL SD+ L +     T  +V  ++ +E  FF+ FA SM+ MGN+  LTG  GEIR +C  +N
Sbjct:  260 ISPLDLASPARFDNTYFKLLLWGKGLLTSDEVLLTGNVGKTGALVKAYAEDERLFFQQFAKSMVNMGNIQPLTGFNGEIRKSCHVIN 346          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.144e-12
Identity = 39/101 (38.61%), Postives = 60/101 (59.41%), Query Frame = -1
Query:  171 VLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNLSTRSSSDGG 473
            + T +D  TP+  DN+Y+  L    GL  SD +L   P      +V++F+SNET + E FA +M++MG + + TGT GE+R NC  VN +  S+ S+ + G
Sbjct:  254 ITTAMDPGTPNVLDNNYYKLLPRGMGLFFSDNQLRVNP--QMAALVSSFASNETLWKEKFAAAMVKMGRIQVQTGTCGEVRLNCGVVNPSLYSSSSAVELG 352          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.494e-12
Identity = 39/88 (44.32%), Postives = 54/88 (61.36%), Query Frame = -1
Query:  210 LTNLDLSTPDGFDNDYFSNLQANNGLLQSDQEL-FSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 470
            +T LDL TP  FDN Y+ NL +  GLL SDQ L    PG  T  IV  ++++++ FFE F  +M++MG +    G+  EIR NCR +N
Sbjct:  265 ITQLDLVTPSTFDNQYYVNLLSGEGLLPSDQALAVQDPG--TRAIVETYATDQSVFFEDFKNAMVKMGGIP--GGSNSEIRKNCRMIN 348          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.951e-12
Identity = 38/89 (42.70%), Postives = 51/89 (57.30%), Query Frame = -1
Query:  210 SVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 476
            S    LD S+P  FDN +F  ++   G+LQ DQ L S P   T  IV  +++N   F   F  +M++MG + +LTG  GEIR NCRR N
Sbjct:  227 SATAALDQSSPLRFDNQFFKQIRKRRGVLQVDQRLASDP--QTRGIVARYANNNAFFKRQFVRAMVKMGAVDVLTGRNGEIRRNCRRFN 313          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.951e-12
Identity = 35/85 (41.18%), Postives = 52/85 (61.18%), Query Frame = -1
Query:  222 SVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNC 476
            + L  LDL TP+ FDN+Y+ NL  + GLL SDQ LF+    D+  IV  + +N   F   FA +M++M  + ++TGT G +R+ C
Sbjct:  235 ATLRPLDLVTPNSFDNNYYRNLVTSRGLLISDQVLFNADSTDS--IVTEYVNNPATFAADFAAAMVKMSEIGVVTGTSGIVRTLC 317          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.951e-12
Identity = 35/85 (41.18%), Postives = 52/85 (61.18%), Query Frame = -1
Query:  222 SVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNC 476
            + L  LDL TP+ FDN+Y+ NL  + GLL SDQ LF+    D+  IV  + +N   F   FA +M++M  + ++TGT G +R+ C
Sbjct:  235 ATLRPLDLVTPNSFDNNYYRNLVTSRGLLISDQVLFNADSTDS--IVTEYVNNPATFAADFAAAMVKMSEIGVVTGTSGIVRTLC 317          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.951e-12
Identity = 38/85 (44.71%), Postives = 51/85 (60.00%), Query Frame = -1
Query:  222 SVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNC 476
            S L  LD ++   FDN Y+ NL  N GLL SDQ L + P A  +  V ++S N   F   FAVSM++MGN+ ++TG+ G IR  C
Sbjct:  264 SKLAALDAASSVKFDNAYYVNLMNNIGLLDSDQTLMTDPTAAAL--VKSYSENPYLFSRDFAVSMVKMGNIGVMTGSDGVIRGKC 346          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.548e-12
Identity = 42/99 (42.42%), Postives = 56/99 (56.57%), Query Frame = -1
Query:  192 SVLTNLDL----STPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNLST 476
            + LT+ DL    +TP  FD  Y+ NL  N G++ SDQ L  T    T   V  +S+N T F E FA +MI+MGNL    G Q EIR  C RVN  ++++
Sbjct:  266 ATLTDSDLQQLDTTPAVFDKVYYDNLNNNQGIMFSDQVL--TGNTTTAGFVTTYSNNVTVFLEDFAAAMIKMGNLPPSAGAQLEIRDVCSRVNPTSVAS 362          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER61_ARATH (Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.415e-12
Identity = 37/91 (40.66%), Postives = 58/91 (63.74%), Query Frame = -1
Query:  201 VLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANN 473
            V  N D  + + F + Y+S + ++N +L+ DQEL +    D+  I   F+S    F +SFA++M RMG++++LTGT GEIR +CR  NAN+
Sbjct:  250 VYLNPDSGSSNRFTSSYYSRVLSHNAVLRVDQELLNND--DSKEITQEFASGFEDFRKSFALAMSRMGSINVLTGTAGEIRRDCRVTNAND 338          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.415e-12
Identity = 38/88 (43.18%), Postives = 50/88 (56.82%), Query Frame = -1
Query:  198 LDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNL 461
            LD  TP  FDN YF NL+   GLL SD  LF  P   T P V  +++N+TAFFE FA +M ++G + +     GE+R  C   N  N+
Sbjct:  241 LDPVTPGKFDNMYFKNLKRGLGLLASDHILFKDPS--TRPFVELYANNQTAFFEDFARAMEKLGRVGVKGEKDGEVRRRCDHFNKLNV 326          
The following BLAST results are available for this feature:
BLAST of CF832247 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
PER9_ARATH8.759e-1342.53Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]
PER1_MAIZE1.144e-1238.61Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PER40_ARATH1.494e-1244.32Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER57_ARATH1.951e-1242.70Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=... [more]
PER2_ZINEL1.951e-1241.18Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]
PER1_ZINEL1.951e-1241.18Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]
PER10_ARATH1.951e-1244.71Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER2_SOLLC2.548e-1242.42Suberization-associated anionic peroxidase 2 OS=So... [more]
PER61_ARATH7.415e-1240.66Probable peroxidase 61 OS=Arabidopsis thaliana GN=... [more]
PER41_ARATH7.415e-1243.18Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01I21_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01I21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832247 ID=CF832247; Name=CF832247; organism=Citrus sinensis; type=EST; length=476bp
TTTTTTTTTTTTTTTTTCCAACGGGCTCATAATTTTATTCAGACCCTGAA
AATATTGTTAGGACAAACACGAGACAAGGTACATGAGTTTGTTACCCACA
AACTCTCAACAGCAAAACTACTTCACACAGTTTTATTTTATGCTTTCATG
ATTTAGATAGAGCTGACCAAACCGCCATCTGATGATGATCTGGTTGATAA
ATTGTTTGCATTAACCCTTCTGCAGTTTGACCTGATCTCTCCTTGAGTCC
CTGTTAGAAGGCTTAAATTCCCCATTCTGATCATAGAAACCGCAAAGCTT
TCAAAGAAAGCAGTTTCGTTGCTGCTAAAGTTGTTGACAATGGGAATGGT
ATCGGCGCCGGGTGTCGAAAACAGCTCTTGATCACTCTGTAAAAGGCCAT
TGTTAGCTTGAAGATTGGAGAAATAATCGTTGTCAAAACCATCCGGTGTT
GAGAGATCAAGATTCGTTAGGACGCT
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