CF832247

Overview
NameCF832247
Unique NameCF832247
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length476
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1145 contig Csv1_Contig1145:14..489. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.415e-12
Identity = 37/88 (42.05%), Postives = 50/88 (56.82%), Query Frame = -1
Query:  210 VLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 473
            +  N+D  TP  FDN YF NLQ   GL  SDQ LF T G    P VN ++SN TAF  +F ++M ++G + +   + G IR +C   N
Sbjct:  244 IAINMDPVTPKTFDNTYFKNLQQGKGLFTSDQVLF-TDGRSR-PTVNAWASNSTAFNRAFVIAMTKLGRVGVKNSSNGNIRRDCGAFN 329          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 9.684e-12
Identity = 37/89 (41.57%), Postives = 51/89 (57.30%), Query Frame = -1
Query:  210 SVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 476
            SV  +LD  +   +D  Y++NL    G+LQSDQ L++ P   T PIV    +  + F   FA SM+RM N+ ++TG  GEIR  C  VN
Sbjct:  242 SVRVDLDTGSGSTWDTSYYNNLSRGRGVLQSDQVLWTDPA--TRPIVQQLMAPRSTFNVEFARSMVRMSNIGVVTGANGEIRRVCSAVN 328          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 9.684e-12
Identity = 39/91 (42.86%), Postives = 57/91 (62.64%), Query Frame = -1
Query:  210 SVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTP-GADTIPIVNNFSSNETAFFESFAVSMIRMGN-LSLLTGTQGEIRSNCRRVN 476
            S +T +D  TP+ FDN  +  L    GLL SDQE++++  G  T  IV+ ++ +  AFFE F+ SM++MGN L+  +   GE+R NCR VN
Sbjct:  245 SNVTAIDNVTPNLFDNSIYHTLLRGEGLLNSDQEMYTSLFGIQTRRIVSKYAEDPVAFFEQFSKSMVKMGNILNSESLADGEVRRNCRFVN 335          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.652e-11
Identity = 38/89 (42.70%), Postives = 50/89 (56.18%), Query Frame = -1
Query:  210 SVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 476
            S   +LD  + + FD  YF NL  N G+LQSD  L+++P   T  IV  F +    F   FA SM++M N+ + TGT GEIR  C  VN
Sbjct:  233 SARVDLDTGSGNTFDTSYFINLSRNRGILQSDHVLWTSPA--TRSIVQEFMAPRGNFNVQFARSMVKMSNIGVKTGTNGEIRRVCSAVN 319          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.680e-11
Identity = 35/83 (42.17%), Postives = 50/83 (60.24%), Query Frame = -1
Query:  210 DLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 458
            D+ TP+ FDN YF N+    GLL+SD  LFS P   T P V  ++ +++ FF  FA +M ++    +LTG +GEIR  C  +N
Sbjct:  248 DVMTPNKFDNMYFQNIPKGLGLLESDHGLFSDP--RTRPFVELYARDQSRFFNDFAGAMQKLSLHGVLTGRRGEIRRRCDAIN 328          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.806e-11
Identity = 36/88 (40.91%), Postives = 50/88 (56.82%), Query Frame = -1
Query:  210 VLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 473
            +  N+D +TP  FDN YF NLQ   GL  SDQ LF T G    P VN+++ N  AF ++F  +M ++G + + T   G IR +C   N
Sbjct:  244 IAINMDPTTPRQFDNIYFKNLQQGKGLFTSDQVLF-TDGRSK-PTVNDWAKNSVAFNKAFVTAMTKLGRVGVKTRRNGNIRRDCGAFN 329          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.806e-11
Identity = 33/80 (41.25%), Postives = 49/80 (61.25%), Query Frame = -1
Query:  210 TPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 449
            TP  FDN +F  ++   G+L  DQ + S P   T  +V  ++SN   F   FA++M++MG + +LTG+ GEIR+NCR  N
Sbjct:  244 TPVSFDNLFFGQIRERKGILLIDQLIASDPA--TSGVVLQYASNNELFKRQFAIAMVKMGAVDVLTGSAGEIRTNCRAFN 321          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.198e-11
Identity = 35/88 (39.77%), Postives = 53/88 (60.23%), Query Frame = -1
Query:  210 VLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 473
            V  N+D +TP  FDN Y+ NLQ   GL  SDQ LF+   + + P V+ +++N   F ++F  SMI++G + + TG+ G IR +C   N
Sbjct:  244 VAINMDPNTPRQFDNVYYKNLQQGKGLFTSDQVLFT--DSRSKPTVDLWANNGQLFNQAFISSMIKLGRVGVKTGSNGNIRRDCGAFN 329          
The following BLAST results are available for this feature:
BLAST of CF832247 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
PER35_ARATH7.415e-1242.05Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER71_ARATH9.684e-1241.57Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]
PER11_ARATH9.684e-1242.86Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER62_ARATH1.652e-1142.70Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=... [more]
PER63_ARATH3.680e-1142.17Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER73_ARATH4.806e-1140.91Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER28_ARATH4.806e-1141.25Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER51_ARATH8.198e-1139.77Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01I21_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01I21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832247 ID=CF832247; Name=CF832247; organism=Citrus sinensis; type=EST; length=476bp
TTTTTTTTTTTTTTTTTCCAACGGGCTCATAATTTTATTCAGACCCTGAA
AATATTGTTAGGACAAACACGAGACAAGGTACATGAGTTTGTTACCCACA
AACTCTCAACAGCAAAACTACTTCACACAGTTTTATTTTATGCTTTCATG
ATTTAGATAGAGCTGACCAAACCGCCATCTGATGATGATCTGGTTGATAA
ATTGTTTGCATTAACCCTTCTGCAGTTTGACCTGATCTCTCCTTGAGTCC
CTGTTAGAAGGCTTAAATTCCCCATTCTGATCATAGAAACCGCAAAGCTT
TCAAAGAAAGCAGTTTCGTTGCTGCTAAAGTTGTTGACAATGGGAATGGT
ATCGGCGCCGGGTGTCGAAAACAGCTCTTGATCACTCTGTAAAAGGCCAT
TGTTAGCTTGAAGATTGGAGAAATAATCGTTGTCAAAACCATCCGGTGTT
GAGAGATCAAGATTCGTTAGGACGCT
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