CF832249
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: AGL11_ARATH (Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana GN=AGL11 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.028e-43 Identity = 91/154 (59.09%), Postives = 118/154 (76.62%), Query Frame = -3 Query: 383 RGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNLMQGGSSYEIIQSQPFDSRSYF 844 RGRLYEY+NN+++STI+RYKKA +D++NT ++ E NA +YQQE+AKLR QI +QNSNRN++G+SLS L+ KELK +E RLEK ISRIRSKK+ELL EIE QKRE++L N N LR K+AE ER QQ+ + M GS I++ SR+YF Sbjct: 51 RGRLYEYANNNIRSTIERYKKACSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSLSVKELKQVENRLEKAISRIRSKKHELLLVEIENAQKREIELDNENIYLRTKVAEVERYQQHHHQMVSGSEINAIEA--LASRNYF 202
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: MAD21_ORYSJ (MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica GN=MADS21 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.063e-40 Identity = 91/172 (52.91%), Postives = 122/172 (70.93%), Query Frame = -3 Query: 380 RGRLYEYSN-NSVKSTIDRYKKATADTSNTGSICEANA-QFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMN-------------LMQGGSSYEIIQSQP--FDSRSYFQ 844 RGRLYE+SN NS +STI+RYKKA+A TS + + + N+ Q++QQEAAK+R QI +QN+NR+++GES+ + KELK++E RLEKGISRIRSKK+ELLF+EIEYMQKRE DL N N LRAK+AE ER + + + G SS +++ P FD+R Y+Q Sbjct: 51 RGRLYEFSNVNSTRSTIERYKKASASTSGSAPVIDVNSHQYFQQEAAKMRHQIQTLQNANRHLIGESIGNMTAKELKSLENRLEKGISRIRSKKHELLFSEIEYMQKREADLQNENMFLRAKVAEAERAEHDDQQAAEDDEMAPAPAVGGGSSSGTELEALPATFDTREYYQ 222
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: MAD13_ORYSJ (MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica GN=MADS13 PE=1 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 1.589e-36 Identity = 87/177 (49.15%), Postives = 123/177 (69.49%), Query Frame = -3 Query: 365 RGRLYEYSNNS-VKSTIDRYKKATADTSNTGS-ICEANAQ-FYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNL-------MQGGSSYEIIQSQPF-------DSRSYFQVNALQ 844 RGRLYEYSNN+ VK+TIDRYKKA A S +G+ + E NAQ +YQQE+AKLR QI +QN+N++++G+++S L+ KELK +E+RLEKGIS+IR++KNELL +EI YM KRE++L N N LR KIAE E+ Q + + +Q ++ + Q PF D + +F +N + Sbjct: 51 RGRLYEYSNNNNVKATIDRYKKAHACGSTSGAPLIEVNAQQYYQQESAKLRHQIQMLQNTNKHLVGDNVSNLSLKELKQLESRLEKGISKIRARKNELLASEINYMAKREIELQNDNMDLRTKIAEEEQQLQQVTVARSAAMELQAAAAAQQQQQNPFAVAAAQLDMKCFFPLNLFE 227
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: MAD27_ORYSJ (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 7.923e-20 Identity = 51/121 (42.15%), Postives = 79/121 (65.29%), Query Frame = -3 Query: 479 GRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIA 841 GRLYEYS+ S+KS IDRY K+ D + + +F+Q+EAA LR Q+ N+Q ++R ++GE LSGLN KEL+++E +LE + +R+KK+ +L EI + ++ +H N L KI+ Sbjct: 52 GRLYEYSSTSMKSVIDRYGKSK-DEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLNVKELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKKIS 171
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 6.278e-17 Identity = 49/132 (37.12%), Postives = 78/132 (59.09%), Query Frame = -3 Query: 446 GRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNL 841 GRLYE+S+ ++K+ IDRY A + G + + +Q+EAA LR Q+ N+Q S++ ++GE LSGL ++L+ +E RLE + IR +K+ LL +EIE + + +H N L + N QQ + L Sbjct: 52 GRLYEFSSTNMKTVIDRYTNAKEEL--LGGNATSEIKIWQREAASLRQQLHNLQESHKQLMGEELSGLGVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQENIELSRSL--NVMSQQKLEL 179
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: SOC1_ARATH (MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.941e-16 Identity = 41/125 (32.80%), Postives = 77/125 (61.60%), Query Frame = -3 Query: 470 RGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENE 844 +G+LYE+++++++ TIDRY + T D +T + E N Q + EAA + +I ++ S R +LGE + + +EL+ +E +LEK + IR++K ++ +IE ++++E L N+ L K +E Sbjct: 51 KGKLYEFASSNMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEKWGSHE 175
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: MAD23_ORYSJ (MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica GN=MADS23 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.546e-15 Identity = 39/106 (36.79%), Postives = 73/106 (68.87%), Query Frame = -3 Query: 521 RLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREV 838 RLY+++++S+KS I+RY + D T + + A+ +QQEAA LR Q+ N+Q +R +LG+ LSGL+ ++L+N+E++LE + IR +K+ ++ +I+ + ++ V Sbjct: 53 RLYDFASSSMKSIIERYNETKEDPHQTMN-ASSEAKLWQQEAASLRQQLHNLQEYHRQLLGQQLSGLDVEDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRKVV 157
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.546e-15 Identity = 49/136 (36.03%), Postives = 84/136 (61.76%), Query Frame = -3 Query: 455 RGRLYEY-SNNSVKSTIDRYKKATADTSNTG-SICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAE----NERGQQN 844 RG+LYE+ S++S+ T++RY+K T S EA QQE KL+ + +Q S RN+LGE L LN KEL+++E +L+ + +IRS + +L+ +++ +Q++E L+ +N+ L+ ++ E N + QQN Sbjct: 51 RGKLYEFCSSSSMLKTLERYQKCNYGAPETNISTREALEISSQQEYLKLKARYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQRLMEGSTLNLQWQQN 186
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.020e-15 Identity = 47/149 (31.54%), Postives = 85/149 (57.05%), Query Frame = -3 Query: 407 RGRLYEYSNNS-VKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENER--GQQNMNLMQGGSSYEIIQSQ 844 +G+L+EYS +S ++ ++RY + + ++ + E AKL+ ++ ++ + RN +GE L L+ KEL+++E +L+ I IRS+KN+ +F I +QK++ L + N L KI E E+ GQQ L+Q +S ++ Q Sbjct: 51 KGKLFEYSTDSCMERILERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKIKEREKKTGQQEGQLVQCSNSSSVLLPQ 199
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.445e-15 Identity = 46/131 (35.11%), Postives = 78/131 (59.54%), Query Frame = -3 Query: 455 RGRLYEYSNNS-VKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQN 844 +G+LYE+S++S ++ ++RY++ + D + + + E L+ ++ +Q S R +LGE L L KEL+ +E +LE + IRSKKN+LLF I +QK+E L N N +L+ K+ E E+ + N Sbjct: 51 KGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQ-KLMETEKEKNN 180 The following BLAST results are available for this feature:
BLAST of CF832249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832249 ID=CF832249; Name=CF832249; organism=Citrus sinensis; type=EST; length=846bpback to top |