CF832249
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSJ (MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica GN=MADS5 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.447e-13 Identity = 44/129 (34.11%), Postives = 78/129 (60.47%), Query Frame = -3 Query: 476 RGRLYEYSNNS-VKSTIDRYKKATADTSNTGSICEANAQFYQ-----QEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAE 844 RGRL+E+S +S + T++RY+ + ++ CEA+A QE KL+ ++ +Q + RN+LGE L L+ KEL+ +E ++E + IRS KN+ L ++ ++++E L ++N+ L+ KI E Sbjct: 51 RGRLFEFSTSSCMYKTLERYRSCNYNLNS----CEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRKIQE 175
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSI (MADS-box transcription factor 5 OS=Oryza sativa subsp. indica GN=MADS5 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.447e-13 Identity = 44/129 (34.11%), Postives = 78/129 (60.47%), Query Frame = -3 Query: 476 RGRLYEYSNNS-VKSTIDRYKKATADTSNTGSICEANAQFYQ-----QEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAE 844 RGRL+E+S +S + T++RY+ + ++ CEA+A QE KL+ ++ +Q + RN+LGE L L+ KEL+ +E ++E + IRS KN+ L ++ ++++E L ++N+ L+ KI E Sbjct: 51 RGRLFEFSTSSCMYKTLERYRSCNYNLNS----CEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRKIQE 175
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.447e-13 Identity = 49/154 (31.82%), Postives = 79/154 (51.30%), Query Frame = -3 Query: 404 RGRLYEYSNNSVKSTI----DRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAE---NERGQQNMNLMQGGSSYEIIQSQP 844 +G+LYEY+ +S I +RY A + S E N + E KL+ +I +Q +++++GE L LN KEL+ +E +LE + I S+K+ L+ I +QK+E L N+ L+ ++ E N RGQQ + Q+QP Sbjct: 51 KGKLYEYATDSRMDKILERYERYSYAEKALISAESESEGN---WCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKALQKELVERQKNVRGQQQVGQWDQTQVQAQAQAQP 201
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: AGL9_SOLLC (Agamous-like MADS-box protein AGL9 homolog OS=Solanum lycopersicum GN=TDR5 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.447e-13 Identity = 44/128 (34.38%), Postives = 77/128 (60.16%), Query Frame = -3 Query: 467 RGRLYEY-SNNSVKSTIDRYKKATADTSNTG-SICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENER 844 RG+LYE+ S++S+ T++RY+K S EA QQE KL+ + +Q S RN+LGE L LN KEL+++E +L+ + +IRS + +L+ ++ Q++E L+ +N+ L+ ++ E + Sbjct: 51 RGKLYEFCSSSSMLKTLERYQKCNYGAPEPNISTREALEISSQQEYLKLKGRYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLTDYQRKEHALNEANRTLKQRLMEGSQ 178
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: MAD17_ORYSJ (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica GN=MADS17 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.890e-13 Identity = 35/122 (28.69%), Postives = 73/122 (59.84%), Query Frame = -3 Query: 482 RGRLYEYSNNSVKSTIDRYKKATADTSNTGS-ICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKI 844 RG+LYE+ + + T+++Y + + S + Q + QE ++L+ ++ +Q S R+MLGE L L+ KEL+ +E +LE +S+ R +K +++ +++ ++++E L N+ L+ K+ Sbjct: 51 RGKLYEFGSAGINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKL 172
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.890e-13 Identity = 39/133 (29.32%), Postives = 83/133 (62.41%), Query Frame = -3 Query: 446 GRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENE-RGQQNMNL 841 G+LYE+SN V TI+RY + + + ++ + Q +QE KL+ + ++ ++RN++GE L G++ KEL+ +E +LE +S R +K +++ ++E ++++E +L + N L+ + +++ +G Q++ L Sbjct: 52 GKLYEFSNVGVGRTIERYYRCKDNLLDNDTL--EDTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINNKLKLETEDHDFKGFQDLLL 182
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 2.469e-13 Identity = 42/134 (31.34%), Postives = 78/134 (58.21%), Query Frame = -3 Query: 458 RGRLYEY-SNNSVKSTIDRYKKATADTSNTGSICEANAQFY--QQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENE--RGQQ 844 RG+LYE+ S S+ T+++Y+K + T + Q + E KL+ ++ N+Q + RN+LGE L L KEL+++E +L+ + +R+ + + L ++ +Q++E + +N+ LR K+ E+ RGQQ Sbjct: 51 RGKLYEFCSTQSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHVRGQQ 184
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 2.469e-13 Identity = 42/134 (31.34%), Postives = 78/134 (58.21%), Query Frame = -3 Query: 458 RGRLYEY-SNNSVKSTIDRYKKATADTSNTGSICEANAQFY--QQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENE--RGQQ 844 RG+LYE+ S S+ T+++Y+K + T + Q + E KL+ ++ N+Q + RN+LGE L L KEL+++E +L+ + +R+ + + L ++ +Q++E + +N+ LR K+ E+ RGQQ Sbjct: 51 RGKLYEFCSTQSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHVRGQQ 184
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.183e-13 Identity = 48/174 (27.59%), Postives = 89/174 (51.15%), Query Frame = -3 Query: 377 RGRLYEY-SNNSVKSTIDRYKKATAD------TSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNLMQGGSSY-----------EIIQSQPFDSRSYFQV 844 RG+LYE+ S +S+ T++RY+K TS + E ++Q QE KL+ + ++Q S RN++GE L L+ K+L+ +E +L+ + +IRS + + + ++ +Q++E L +N+ LR ++ + +NL Y E+ Q QP + Q+ Sbjct: 51 RGKLYEFCSTSSMLKTLERYQKCNYGAPEGNVTSKEALVLELSSQ---QEYLKLKARYESLQRSQRNLMGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQRMEGYQINSLQLNLSAEDMGYGRHHQGHTHGDELFQVQPIECEPTLQI 221
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.381e-13 Identity = 39/133 (29.32%), Postives = 73/133 (54.89%), Query Frame = -3 Query: 449 RGRLYEYSNNS-VKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMN 844 +G+L+EY+ +S ++ ++RY++ + + + E AKL+ ++ +Q + + +GE L LN KEL+N+E +L + IRS+KN+L+ I +QK++ L N L K+ E E+ + N Sbjct: 51 KGKLFEYATDSCMERLLERYERYSFAEKQLVPTDHTSPGSWTLENAKLKARLEVLQRNEKLYVGEDLESLNMKELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREKEVEQQN 183 The following BLAST results are available for this feature:
BLAST of CF832249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832249 ID=CF832249; Name=CF832249; organism=Citrus sinensis; type=EST; length=846bpback to top |