CF832249
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: AGL14_ARATH (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana GN=AGL14 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 9.381e-13 Identity = 42/128 (32.81%), Postives = 77/128 (60.16%), Query Frame = -3 Query: 464 RGRLYEYSNNS-VKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERG 844 RG+LYE+S++S + T++RY+K D + + N+Q + E L +I +++ S R M+GE L + +EL+ +E +L++ + +IR+KK +LL E E ++++E +L N++L K RG Sbjct: 51 RGKLYEFSSSSSIPKTVERYQKRIQDLGSNHKRND-NSQQSKDETYGLARKIEHLEISTRKMMGEGLDASSIEELQQLENQLDRSLMKIRAKKYQLLREETEKLKEKERNLIAENKMLMEKCEMQGRG 177
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: AGL3_ARATH (Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana GN=AGL3 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.225e-12 Identity = 53/185 (28.65%), Postives = 100/185 (54.05%), Query Frame = -3 Query: 350 RGRLYEY--SNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAEN--------------ERGQQNMNLMQGGSSYEIIQSQPFDSRSYF---QVN-ALQPTNHY 844 RG+LYE+ S + + T+D+Y+K + T + + + Q Q+ KL+ ++ +Q+S R++LGE LS ++ EL+++E +++ + +IRS K + ++ ++ +E L +N+ LR K+ ++ E+ QQ+ QG SSY+ + P +F Q N ALQ ++HY Sbjct: 51 RGKLYEFCSSPSGMARTVDKYRKHSYATMDPNQSAK-DLQDKYQDYLKLKSRVEILQHSQRHLLGEELSEMDVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLETNRDLRRKLEDSDAALTQSFWGSSAAEQQQQHQQQQQGMSSYQ--SNPPIQEAGFFKPLQGNVALQMSSHY 232
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: MAD34_ORYSJ (MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica GN=MADS34 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 2.090e-12 Identity = 46/166 (27.71%), Postives = 90/166 (54.22%), Query Frame = -3 Query: 368 GRLYEYSNNS-VKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENE------RGQQNMNLMQG-GSSYEIIQSQPFDSRSYFQVNAL 841 GRLY++S++S + T++RY++ + + + Q QE L+ + +Q S RN+LGE L+ L EL+ +E+++ + + +IRS+K ++L E+ ++++E L ++N++L+ K+ E + + N N G G + S+P +FQ L Sbjct: 52 GRLYQFSSSSNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDEIDVEAAPPQPPWNGNCSNGHGGGGGVFSSEPPQPEHFFQALGL 217
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 2.090e-12 Identity = 38/128 (29.69%), Postives = 77/128 (60.16%), Query Frame = -3 Query: 467 RGRLYEYSNNS-VKSTIDRYKKAT-ADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENER 844 +G+L+EYS +S ++ ++RY++ + A+ + N + E +L+ +I ++ + R+ LGE L ++ KEL+N+E +L+ + IR++KN+L++ I +QK+E + N +L +I E E+ Sbjct: 51 KGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTN-WSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREK 177
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.656e-12 Identity = 43/142 (30.28%), Postives = 82/142 (57.75%), Query Frame = -3 Query: 422 RGRLYEY-SNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNLMQGGSSYE 844 RG+LYE+ S++++ T+DRY+K + + + + +E KL+ + N+Q RN+LGE L LN KEL+ +E +L+ + ++RS K + + ++ +Q +E L +N+ L K+ ++ G ++ + M GG +E Sbjct: 51 RGKLYEFCSSSNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKL-DDMIGVRSHH-MGGGGGWE 190
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.656e-12 Identity = 38/128 (29.69%), Postives = 76/128 (59.38%), Query Frame = -3 Query: 467 RGRLYEYSNNS-VKSTIDRYKKAT-ADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENER 844 +G+L+EYS +S ++ ++RY++ + A+ + N + E +L+ +I ++ + R+ LGE L ++ KEL+N+E +L+ + IRS+KN+L+ I +Q++E + N +L +I E E+ Sbjct: 51 KGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTN-WSMEYNRLKAKIELLERNQRHYLGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSMLSKQIKEREK 177
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: GGM13_GNEGN (MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.037e-11 Identity = 40/126 (31.75%), Postives = 73/126 (57.94%), Query Frame = -3 Query: 470 GRLYEYSN--NSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENE 841 G+L+EYS+ +S+K I+RY+K + I E + Q E +++ + +Q + R M+GE L+ L EL ++ +LE SR+RS+KN+L+ ++E ++++E L + N L +AE + Sbjct: 52 GKLFEYSSASSSMKKIIERYQKVSG-----ARITEYDNQHLYCEMTRMKNENEKLQTNIRRMMGEDLTSLTMTELHHLGQQLESASSRVRSRKNQLMLQQLENLRRKERILEDQNSHLCRLLAEQQ 172
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.311e-11 Identity = 50/183 (27.32%), Postives = 95/183 (51.91%), Query Frame = -3 Query: 326 RGRLYEY-SNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNL---MQGGSSYEIIQSQP-FDSRSYFQVNALQPT-----NHYPRQDQMAL 844 RG+LYE+ S +++ T++RY+K + + + + +E KL+ + N+Q RN+LGE L LN KEL+ +E +L+ + ++R K + + ++ +Q +E L ++N+ L K+ E+ G ++ ++ +GG I P S+ +Q PT +H +QMA+ Sbjct: 51 RGKLYEFCSTSNMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKL-EDMIGVRHHHIGGGWEGGDQQNIAYGHPQAHSQGLYQSLECDPTLQIGYSHPVCSEQMAV 232
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.018e-11 Identity = 42/136 (30.88%), Postives = 79/136 (58.09%), Query Frame = -3 Query: 449 RGRLYEY-SNNSVKSTIDRYKKAT--ADTSNTGSICEANAQFY-QQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMN 844 RG+LYE+ S++S+ T++RY+K A N S + QQE KL+ + +Q + RN+LGE L L+ KEL+++E +L+ + +IR+ + + + ++ +Q +E L +N+ LR ++A+ + +N Sbjct: 51 RGKLYEFCSSSSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLADGYQMPLQLN 186
BLAST of CF832249 vs. ExPASy Swiss-Prot
Match: MAD50_ORYSJ (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.018e-11 Identity = 39/145 (26.90%), Postives = 79/145 (54.48%), Query Frame = -3 Query: 449 RGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKI-------------AENERGQQNMN 844 RG+LYE+++ S + TI+RY+ T + ++ + + + + +A L ++ ++ R +LGE L + +EL ++E +LE+ + IR +K +LL ++ ++++E+ L N+ LR K AE+E +N+N Sbjct: 51 RGKLYEFASASTQKTIERYRTYTKENIGNKTV-QQDIEQVKADADGLAKKLEALETYKRKLLGEKLDECSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREKEMKLRKDNEELREKCKNQPPLSAPLTVRAEDENPDRNIN 194 The following BLAST results are available for this feature:
BLAST of CF832249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832249 ID=CF832249; Name=CF832249; organism=Citrus sinensis; type=EST; length=846bpback to top |