CF832250
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: MAD29_ORYSJ (MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica GN=MADS29 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.055e-27 Identity = 65/159 (40.88%), Postives = 104/159 (65.41%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNN--SVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKRE 713 MGRGKIEIKRIEN TNRQVTF KRR GLLKKA EL+VLCDA V +++FSS G+++EY + S++ I+ Y+ T NT + Q E ++R ++ + R G+ LS L ++ ++E +LE ++++R++K++LL +++ ++++E Sbjct: 1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPTCSLRELIEHYQTVT----NTHFEEINHDQQIFVEMTRMRNEMEKLDGGIRRFTGDDLSNLTLADINDLEQQLEFSVTKVRARKHQLLNQQLDNLRRKE 155
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: MADS2_PETHY (Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.350e-27 Identity = 65/148 (43.92%), Postives = 100/148 (67.57%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNS--VKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELL 680 MGRGKIEIKRIEN++NRQVT+ KRRNG++KKA E++VLCDA+VSLI+F + G+++EY + S + +D Y+K + + +A + E +++ + NMQ R++ GE ++ LN KEL +E L G+S I +K++E+L Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSPSTTLPDMLDGYQKTSG-----RRLWDAKHENLSNEIDRIKKENDNMQVKLRHLKGEDINSLNHKELMVLEEGLTNGLSSISAKQSEIL 143
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.166e-26 Identity = 64/158 (40.51%), Postives = 99/158 (62.66%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNS--VKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKR 710 MGRGKIEIKRIEN TNRQVT+ KRR G++KKA EL+VLCDA+V++I+FSS G+ +E+ + S +K DRY++A S+ + Q+ + L+ N++ R +GE L GL F EL+ +E ++ + +R +K ++ + E +K+ Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPSTDIKGIFDRYQQAIGT-----SLWIEQYENMQRTLSHLKDINRNLRTEIRQRMGEDLDGLEFDELRGLEQNVDAALKEVRHRKYHVITTQTETYKKK 153
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: AGL12_ARATH (Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana GN=AGL12 PE=2 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 2.598e-26 Identity = 69/170 (40.59%), Postives = 100/170 (58.82%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEY-SNNSVKSTIDRYKKATADTSNTGSICEANAQFYQ-------QEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHN 728 M RGKI++KRIEN +RQVTFCKRR GLLKKA ELSVLCDAE+ +++FS +G+L+E + +++ ID+Y K T + S + Q E L+ +I +Q M G +N +EL +E LE IS+IRS K +++ EI+ ++ +E L N Sbjct: 1 MARGKIQLKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATKGTMEGMIDKYMKCTGGGRGSSSATFTAQEQLQPPNLDPKDEINVLKQEIEMLQKGISYMFGGGDGAMNLEELLLLEKHLEYWISQIRSAKMDVMLQEIQSLRNKEGVLKN 170
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: MADS1_PETHY (Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.394e-26 Identity = 64/158 (40.51%), Postives = 102/158 (64.56%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSV--KSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKR 710 M RGKI+IKRIEN TNRQVT+ KRRNGL KKA EL+VLCDA+VS+I+ SS G+L+E+ + S+ K D Y+K + ++ + Q++ KL+ N++ R +GESL+ LN+++L+ + ++ + IR +K +++ +IE +K+ Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMISSTGKLHEFISPSITTKQLFDLYQKTVG-----VDLWNSHYEKMQEQLRKLKEVNRNLRKEIRQRMGESLNDLNYEQLEELMENVDNSLKLIRERKYKVIGNQIETFKKK 153
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: MADS2_ORYSJ (MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica GN=MADS2 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.432e-26 Identity = 66/144 (45.83%), Postives = 95/144 (65.97%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSN--NSVKSTIDRYKKATADTSNTGSIC-EANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSK 665 MGRGKIEIKRIEN+TNRQVTF KRR+G+LKKA E+SVLCDAEV +++FSS G+LY+Y + S+ +++Y+ +N+G I + + E +++ + NMQ R++ GE L+ L KEL +E L+ GI + K Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKTSLSRILEKYQ------TNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLNSLQPKELIMIEEALDNGIVNVNDK 138
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: GLOB_ANTMA (Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.788e-26 Identity = 62/148 (41.89%), Postives = 98/148 (66.22%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNS--VKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELL 680 MGRGKIEIKRIEN++NRQVT+ KRRNG++KKA E+SVLCDA VS+I+F+S G+++E+ + S + +D Y K + + + + E +++ + +MQ R++ GE ++ LN+KEL +E LE G S +++K+ E + Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSPSTTLVDMLDHYHKLSGK-----RLWDPKHEHLDNEINRVKKENDSMQIELRHLKGEDITTLNYKELMVLEDALENGTSALKNKQMEFV 143
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: MAD31_ORYSJ (MADS-box transcription factor 31 OS=Oryza sativa subsp. japonica GN=MADS31 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.874e-26 Identity = 61/158 (38.61%), Postives = 100/158 (63.29%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNN--SVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKR 710 MGRG++E+K+IEN TNRQVTF KRR GLLKKA EL++LCDA++ +IVFS G++YEYS+ + + DRY KA + + Q QE +++ + + ++ R +G+ L+ L +++ N+E ++E + ++R +K +LL ++ M R Sbjct: 1 MGRGRVELKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSPPWRIANIFDRYLKAPSTRFEEMDV----QQRIIQEMTRMKDENNRLRIIMRQYMGDDLASLTLQDVSNLEQQIEFSLYKVRLRKQQLLDQQLLEMHSR 154
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: MAD20_ORYSJ (MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica GN=MADS20 PE=2 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.290e-25 Identity = 59/165 (35.76%), Postives = 107/165 (64.85%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEY--SNNSVKSTIDRYKKATADTSNTGSICEANAQF---YQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDL 722 MGRGK++++RIEN +RQVTF KRR GLLKKA+E++VLCD +V+ IVFS++G L+ Y S+ +++ +++Y + S ++ E + + KLR +I ++ S RN++G+ L L ++++ +E +++ ++ IRS+K +LL + ++K+ +L Sbjct: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASSHTTMERILEKYDRHEL-LSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQELDSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKKITEL 164
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.200e-25 Identity = 66/158 (41.77%), Postives = 95/158 (60.13%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEY--SNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKR 710 M RGKI+IKRIEN TNRQVT+ KRRNGL KKA+EL+VLCDA VS+I+FSS +L+EY N + K +D Y+ T + + + Q+ KL N++ + LGE L L+ +EL+ +E +E +R +K + L +IE +K+ Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPNTTTKEIVDLYQ-----TISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGECLDELDIQELRRLEDEMENTFKLVRERKFKSLGNQIETTKKK 153 The following BLAST results are available for this feature:
BLAST of CF832250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832250 ID=CF832250; Name=CF832250; organism=Citrus sinensis; type=EST; length=728bpback to top |