CF832250
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: DEFA_ANTMA (Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.873e-25 Identity = 63/158 (39.87%), Postives = 99/158 (62.66%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEY--SNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKR 710 M RGKI+IKRIEN TNRQVT+ KRRNGL KKA+ELSVLCDA+VS+I+ SS +L+EY + K D+Y+KA + ++ + Q+ KL N++ R +GESL+ L ++++ N+ ++ + IR +K +++ +I+ +K+ Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELSVLCDAKVSIIMISSTQKLHEYISPTTATKQLFDQYQKAVG-----VDLWSSHYEKMQEHLKKLNEVNRNLRREIRQRMGESLNDLGYEQIVNLIEDMDNSLKLIRERKYKVISNQIDTSKKK 153
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: MAD30_ORYSJ (MADS-box transcription factor 30 OS=Oryza sativa subsp. japonica GN=MADS30 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.900e-25 Identity = 66/166 (39.76%), Postives = 103/166 (62.05%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSV--KSTIDRYKKATADTSNTGSICEANAQFYQ--QEAAKLRIQISNMQNSNRNMLGESLSGLN-FKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLH 725 MG+GKIE+KRIE+ T RQVTF KRR G LKKA EL+VLCDA+V ++VFS +G+L+++ + V RY+ T +T + E N Q E +LR +I ++ S R GE LS ++ EL ++ +LE +S++ ++K+EL+ ++E M++ +H Sbjct: 1 MGQGKIEMKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSPPVILMELFHRYEITTRNT----RLQETNRDDEQMVMEITRLRNEIDQLEASLRRQTGEDLSSVSTVDELSQLQLQLESSLSKVHARKDELMSQQLEDMRRMHQTVH 162
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSJ (MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica GN=MADS26 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.900e-25 Identity = 62/159 (38.99%), Postives = 102/159 (64.15%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEY-SNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLS-GLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKRE 713 M RGK++++RIEN +RQVTFCKRR GLLKKA ELS+LC+A++ +I+FS+ G+LY+ + +++ I+RYK A+ + +N C +QEA L+ +I+ +Q R + G + + +EL +E LE + IRS K +++ EI+ ++ +E Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSASGEQANA---CGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKE 156
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSI (MADS-box transcription factor 26 OS=Oryza sativa subsp. indica GN=MADS26 PE=2 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 4.900e-25 Identity = 62/159 (38.99%), Postives = 102/159 (64.15%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEY-SNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLS-GLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKRE 713 M RGK++++RIEN +RQVTFCKRR GLLKKA ELS+LC+A++ +I+FS+ G+LY+ + +++ I+RYK A+ + +N C +QEA L+ +I+ +Q R + G + + +EL +E LE + IRS K +++ EI+ ++ +E Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSASGEQANA---CGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKE 156
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: PIST_ARATH (Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.358e-25 Identity = 60/151 (39.74%), Postives = 97/151 (64.24%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVK--STIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAE 689 MGRGKIEIKRIEN NR VTF KRRNGL+KKA E++VLCDA+V+LI+F+S G++ +Y S+ + +D+Y+K + + +A + E +++ + ++Q R++ GE + LN K L +E +E G+ ++R + E+L ++ Sbjct: 1 MGRGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCPSMDLGAMLDQYQKLSGK-----KLWDAKHENLSNEIDRIKKENDSLQLELRHLKGEDIQSLNLKNLMAVEHAIEHGLDKVRDHQMEILISK 146
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.432e-24 Identity = 65/162 (40.12%), Postives = 95/162 (58.64%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEA--AKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDL 722 M R + EIKRIE+ RQVTF KRR GL KKA ELSVLCDA+V+LIVFSS G+L ++++S+ ID+Y ++N G + + + + A L Q++ R M GE L GL+ EL+ +E LE G+ R+ K++ +I +Q++ L Sbjct: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSSMNEIIDKY---NTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQL 159
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 3.176e-24 Identity = 66/162 (40.74%), Postives = 101/162 (62.35%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEY-SNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAK----LRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKRE 713 M RGK++++RIEN +RQVTFCKRR GLLKKA ELSVLCDA+V +I+FSS+G+L+E +N ++ + ++RY+ A G E A QQ A + LR +I +Q R+ G + +L +E LE I +IR+ K +++ EI++++ +E Sbjct: 1 MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATNGNMHNLVERYQSNVA-----GGQMEPGALQRQQVAEQGIFLLREEIDLLQRGLRSTYGGGAGEMTLDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKE 157
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.207e-23 Identity = 66/175 (37.71%), Postives = 102/175 (58.29%), Query Frame = 3 Query: 213 GREELSPKRKMG-RGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQE----AAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDL 722 GR E + G R +I I+RI+N RQVTF KRR GL KKA ELS+LCDAEV L+VFS+ G+L+++++ S++ IDRY S T E + Q E A+L+ +++ R M GE L LN ++L+ +E LE G+ + K++ + EI+ ++++ + L Sbjct: 9 GRGEGEGRAATGKRERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSMEQIIDRYN----SHSKTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNVEQLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQL 179
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: MADS4_ORYSJ (MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica GN=MADS4 PE=1 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 1.576e-23 Identity = 64/143 (44.76%), Postives = 86/143 (60.14%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATAD-TSNTGSIC-EANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSK 665 MGRGKIEIKRIEN+TNRQVTF KRR G+LKKA E+ VLCDAEV +++FSS G+L +Y S + +N+G I + + E +++ + NMQ R+M GE L+ L KEL +E L G + +R K Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPKTTSVFPPLSRILEKYQTNSGKILWDEKHKSLSAEIDRVKKENDNMQIELRHMKGEDLNSLQPKELIAIEEALNNGQANLRDK 143
BLAST of CF832250 vs. ExPASy Swiss-Prot
Match: MAD55_ORYSJ (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica GN=MADS55 PE=2 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 2.059e-23 Identity = 62/182 (34.07%), Postives = 97/182 (53.30%), Query Frame = 3 Query: 243 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFY----------------------QQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDL 722 M R + EI+RIE+ RQVTF KRR GL KKA EL+VLCDA+V+L+VFSS G+L +++++++ ID+Y + + T + F+ + + L Q++ R M GE L GL+ +EL+ ME LE G+ R+ K++ EI +Q++ + L Sbjct: 1 MARERREIRRIESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASSNMNEIIDKYTTHSKNLGKTDKQPSIDLNFFLIILLRTYTNSYAYIHLLLQLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKGIQL 182 The following BLAST results are available for this feature:
BLAST of CF832250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832250 ID=CF832250; Name=CF832250; organism=Citrus sinensis; type=EST; length=728bpback to top |