CF832255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: FAL1_KLULA (ATP-dependent RNA helicase FAL1 OS=Kluyveromyces lactis GN=FAL1 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.325e-36 Identity = 79/142 (55.63%), Postives = 98/142 (69.01%), Query Frame = 2 Query: 224 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSL 649 +V +F++M L+ +LLRGIY YGFE PS+IQ R I G DVI QAQSGTGKTATF G+LQ +D + QALVL+PTRELA Q E V+ LGDYL V HAC GG ++ +D + + VV GTPGRV DM++RQ L Sbjct: 20 KVSATFESMNLKPDLLRGIYFYGFEYPSSIQSRAISQIISGKDVIAQAQSGTGKTATFTIGLLQAIDSKSKELQALVLSPTRELASQSESVISNLGDYLNVTAHACTGGKALQQDIKKVSKNCQVVSGTPGRVLDMIKRQVL 161
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: FAL1_CANGA (ATP-dependent RNA helicase FAL1 OS=Candida glabrata GN=FAL1 PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.154e-35 Identity = 78/137 (56.93%), Postives = 99/137 (72.26%), Query Frame = 2 Query: 236 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHED-QRILQAGVHVVVGTPGRVFDMLRRQ 643 +F++M L+E LLRGIY+YGFE PSAIQ R I G DVI QAQSGTGKTATF G+LQ +D QALVL+PTRELA QI KV+ LGDY+ VK +A GG ++ +D ++I + G V+ GTPGRV DM++R+ Sbjct: 24 TFESMDLKEGLLRGIYSYGFEAPSAIQSRAITQIISGKDVIAQAQSGTGKTATFTIGMLQAIDLKKHDLQALVLSPTRELAAQIGKVVTNLGDYMNVKAYAMTGGKTMKDDLKKIQKHGCQVISGTPGRVLDMIKRR 160
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: IF4A_TRYCR (Probable eukaryotic initiation factor 4A OS=Trypanosoma cruzi GN=Tc00.1047053511585.190 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.571e-35 Identity = 80/146 (54.79%), Postives = 102/146 (69.86%), Query Frame = 2 Query: 236 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVK----VHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDY 661 SFD M L +NLLRGIY++GFEKPS+IQQR IVPF +G D+I QAQSGTGKT F G+LQ+LD+ Q LVL+PTRELA Q +V+ +G++L VGGT V +D R LQAG V VGTPGRV D+ +R ++R ++ Sbjct: 27 SFDDMPLHQNLLRGIYSHGFEKPSSIQQRAIVPFTRGGDIIAQAQSGTGKTGAFSIGLLQRLDFRHNVLQGLVLSPTRELALQTAEVITRIGEFLAEGNSSFCATFVGGTRVQDDYRKLQAGSIVAVGTPGRVVDVTKRGAMRTEH 172
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: IF4A_TRYBB (Probable eukaryotic initiation factor 4A OS=Trypanosoma brucei brucei GN=Tb09.160.3270 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.571e-35 Identity = 79/145 (54.48%), Postives = 102/145 (70.34%), Query Frame = 2 Query: 236 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHA----CVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLRPD 658 SFD M L +NLLRGIY++GFEKPS+IQQR IVPF +G D+I QAQSGTGKT F G+LQ+LD+ Q LVL+PTRELA Q +V+ +G++L + VGGT V +D R LQ+G V VGTPGRV D+ +R ++R + Sbjct: 27 SFDDMPLHQNLLRGIYSHGFEKPSSIQQRAIVPFTRGGDIIAQAQSGTGKTGAFSIGLLQRLDFRHNVLQGLVLSPTRELAMQTAEVITRIGEFLAEGSSSFCATFVGGTRVQDDYRKLQSGTIVAVGTPGRVVDVTKRGAMRTE 171
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: FAL1_YEAST (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae GN=FAL1 PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.479e-35 Identity = 75/144 (52.08%), Postives = 101/144 (70.14%), Query Frame = 2 Query: 224 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQA-GVHVVVGTPGRVFDMLRRQSLR 652 +V +F++M L+++LLRGIY+YGFE PS+IQ R I G DVI QAQSGTGKTATF G+LQ +D QAL+L+PTRELA QI +V++ LGDY+ V A GG ++ +D + +Q G V GTPGRV DM+++Q L+ Sbjct: 20 KVSSTFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYMNVNAFAITGGKTLKDDLKKMQKHGCQAVSGTPGRVLDMIKKQMLQ 163
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: FAL1_YEAS7 (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae (strain YJM789) GN=FAL1 PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.479e-35 Identity = 75/144 (52.08%), Postives = 101/144 (70.14%), Query Frame = 2 Query: 224 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQA-GVHVVVGTPGRVFDMLRRQSLR 652 +V +F++M L+++LLRGIY+YGFE PS+IQ R I G DVI QAQSGTGKTATF G+LQ +D QAL+L+PTRELA QI +V++ LGDY+ V A GG ++ +D + +Q G V GTPGRV DM+++Q L+ Sbjct: 20 KVSSTFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYMNVNAFAITGGKTLKDDLKKMQKHGCQAVSGTPGRVLDMIKKQMLQ 163
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: FAL1_VANPO (ATP-dependent RNA helicase FAL1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=FAL1 PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.479e-35 Identity = 77/143 (53.85%), Postives = 99/143 (69.23%), Query Frame = 2 Query: 224 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHED-QRILQAGVHVVVGTPGRVFDMLRRQSL 649 ++ +F++M L+++LLRGIY YGFE PSAIQ R I G DVI QAQSGTGKTATF G+LQ +D QALVL+PTRELA QI +V+ LGDY+ V+ +A GG ++ +D R+ + G VV GTPGRV DM +R L Sbjct: 20 KISPTFESMNLKDDLLRGIYGYGFEAPSAIQSRAITQIISGTDVIAQAQSGTGKTATFTIGMLQAIDLKRKDLQALVLSPTRELASQINQVVSNLGDYMNVQSYAMTGGKTMKDDLNRMQKNGCQVVSGTPGRVLDMFKRHLL 162
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: IF4A2_ORYSJ (Putative eukaryotic initiation factor 4A-2 OS=Oryza sativa subsp. japonica GN=Os02g0221300 PE=3 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 6.331e-34 Identity = 78/183 (42.62%), Postives = 106/183 (57.92%), Query Frame = 2 Query: 113 DMAGLAPEGSQFDARQYDTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDY 661 D +AP ++++ T ++++T G F + E+L+ +KPSA+ QRGIVP C GLD+IQQ+ GT T T C GILQ+LDY +CQALVL PT +LA + + V+ LG +L K HA GGTS HEDQ+IL GV V VGTP V ML+ ++L PD+ Sbjct: 24 DSNSIAPSAIAINSKKKQTT-KDIVTTQGAQF---------------ISESLIGETQTKDLDKPSAVHQRGIVPLCNGLDIIQQSLFGT--TVTLCCGILQRLDYASTECQALVLVPTHDLAHETQNVIGVLGQFLSAKAHAFCGGTSAHEDQQILSTGVQVAVGTPCHVLGMLQGRALCPDH 188
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: FAL1_PHANO (ATP-dependent RNA helicase FAL1 OS=Phaeosphaeria nodorum GN=FAL1 PE=3 SV=3) HSP 1 Score: 142.124 bits (357), Expect = 2.406e-33 Identity = 80/151 (52.98%), Postives = 95/151 (62.91%), Query Frame = 2 Query: 203 DFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLR 652 +F TS + V +F+AM L+ENLLRGIYAYG+E PSA+Q R IV CKG D I QAQSGTGKTATF ILQ V+ LGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRV DM+RR++LR Sbjct: 14 EFSTSKEVTVAPTFEAMHLKENLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISILQS-------------------------VIMGLGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVSGTPGRVADMIRRRNLR 139
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: DHH1_PICST (ATP-dependent RNA helicase DHH1 OS=Pichia stipitis GN=DHH1 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.577e-27 Identity = 66/135 (48.89%), Postives = 87/135 (64.44%), Query Frame = 2 Query: 236 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRR 640 SF+ L+ LL GI+ GFEKPS IQ+ I G DV+ +A++GTGKTA+F LQQ+ L + QAL+L PTRELA Q +V+R LG +LG++ GGTS+ +D L VHV+VGTPGRV D+ R Sbjct: 31 SFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDVLARAKNGTGKTASFIIPSLQQIKPKLNKIQALILVPTRELALQTSQVVRTLGKHLGIQCMVTTGGTSLKDDILRLNDPVHVLVGTPGRVLDLAAR 165 The following BLAST results are available for this feature:
BLAST of CF832255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832255 ID=CF832255; Name=CF832255; organism=Citrus sinensis; type=EST; length=661bpback to top |