CF832255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: DHH1_CHAGB (ATP-dependent RNA helicase DHH1 OS=Chaetomium globosum GN=DHH1 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.279e-26 Identity = 60/135 (44.44%), Postives = 87/135 (64.44%), Query Frame = 2 Query: 239 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQ 643 F+ GL+ +LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L++++ + + Q L+L PTRELA Q +V + LG +LG+ V GGT + +D LQ VH+VVGTPGR+ D+ +Q Sbjct: 13 FEDFGLKRDLLMGIFEAGFEKPSPIQEESIPVALVGRDILARAKNGTGKTAAFVIPALEKINPKVSKIQCLILVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTGLRDDIVRLQDPVHIVVGTPGRILDLAGKQ 147
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: DHH1_MAGGR (ATP-dependent RNA helicase DHH1 OS=Magnaporthe grisea GN=DHH1 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.849e-26 Identity = 59/131 (45.04%), Postives = 85/131 (64.89%), Query Frame = 2 Query: 239 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDM 631 F+ GL+ +LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L+ ++ + + Q L+L PTRELA Q +V + LG +LG+ V GGT++ +D LQ VH+VVGTPGR+ D+ Sbjct: 38 FENFGLKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVVPALETINPKVSKIQCLILVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTTLRDDILRLQDPVHIVVGTPGRILDL 168
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: RH12_ARATH (DEAD-box ATP-dependent RNA helicase 12 OS=Arabidopsis thaliana GN=RH12 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.720e-26 Identity = 58/136 (42.65%), Postives = 87/136 (63.97%), Query Frame = 2 Query: 233 DSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRR 640 + F+ L+ +LL+GIY GFEKPS IQ+ I G D++ +A++GTGKT FC +L+++D QA++L PTRELA Q +V + L YL ++V GGTS+ +D L VH++VGTPGR+ D+ ++ Sbjct: 124 NEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRILDLTKK 259
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: DHH1_CANAL (ATP-dependent RNA helicase DHH1 OS=Candida albicans GN=DHH1 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.346e-26 Identity = 67/164 (40.85%), Postives = 97/164 (59.15%), Query Frame = 2 Query: 164 DTKMNELLSTDGQDFFTSYDEVYD----SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQ 643 DT + L+ +D ++V + SF+ L+ LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA+F LQ + L + QAL+L PTRELA Q +V+R LG ++G + GGTS+ +D L VH++VGTPGRV D+ R+ Sbjct: 3 DTNWKQNLNLPPKDTRPQTEDVLNTKGKSFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCLQLVKPKLNKVQALILVPTRELALQTSQVVRTLGKHVGTQCMVTTGGTSLRDDIVRLHDPVHILVGTPGRVLDLAARK 166
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: DHH1_PICGU (ATP-dependent RNA helicase DHH1 OS=Pichia guilliermondii GN=DHH1 PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.288e-26 Identity = 61/135 (45.19%), Postives = 85/135 (62.96%), Query Frame = 2 Query: 236 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRR 640 SF+ GL+ LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA+F LQQ+ L + Q L+L PTRELA Q +V++ LG +L ++ GGT + +D L VH++VGTPGRV D+ R Sbjct: 30 SFEEFGLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPALQQVKTKLNKIQVLILVPTRELALQTSQVVKTLGKHLKLQCMVTTGGTLLRDDVMRLDEPVHILVGTPGRVLDLAAR 164
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: DHH1_DEBHA (ATP-dependent RNA helicase DHH1 OS=Debaryomyces hansenii GN=DHH1 PE=3 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 8.288e-26 Identity = 62/136 (45.59%), Postives = 87/136 (63.97%), Query Frame = 2 Query: 236 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQ 643 +F+ L+ LL GI+ GFEKPS +Q+ I G D++ +A++GTGKTA+F LQQ + + QAL+L PTRELA Q +V+R LG +LG++ GGTS+ +D L VHV+VGTPGRV D+ R+ Sbjct: 31 TFEDFPLKRELLMGIFEAGFEKPSPVQEESIPMALAGRDILARAKNGTGKTASFVIPCLQQARPKVNKIQALILVPTRELALQTSQVVRTLGKHLGLQCMVTTGGTSLRDDILRLNDPVHVLVGTPGRVLDLASRK 166
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: DHH1_GIBZE (ATP-dependent RNA helicase DHH1 OS=Gibberella zeae GN=DHH1 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.082e-25 Identity = 58/131 (44.27%), Postives = 84/131 (64.12%), Query Frame = 2 Query: 239 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDM 631 F+ L+ +LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L++++ + + Q L+L PTRELA Q +V + LG +LG+ V GGT + +D LQ VH+VVGTPGR+ D+ Sbjct: 44 FENFALKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKISKIQCLILVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTGLRDDIIRLQDPVHIVVGTPGRILDL 174
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: RH12_ORYSJ (DEAD-box ATP-dependent RNA helicase 12 OS=Oryza sativa subsp. japonica GN=Os10g0503700 PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.414e-25 Identity = 59/136 (43.38%), Postives = 85/136 (62.50%), Query Frame = 2 Query: 233 DSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRR 640 + F+ L+ LL GIY GFE+PS IQ+ I G D++ +A++GTGKTA FC L+++D Q ++L PTRELA Q +V + LG YL ++V GGTS+ +D L VH++VGTPGR+ D+ R+ Sbjct: 147 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDPEKNAIQVVILVPTRELALQTSQVCKELGKYLNIQVMVSTGGTSLKDDIMRLYQPVHLLVGTPGRILDLTRK 282
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: DHH1_YARLI (ATP-dependent RNA helicase DHH1 OS=Yarrowia lipolytica GN=DHH1 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.846e-25 Identity = 60/131 (45.80%), Postives = 85/131 (64.89%), Query Frame = 2 Query: 239 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDM 631 F+ L+ LL GI+ GFE PS IQ+ I G D++ +A++GTGKTA F LQQ++ + + QAL++ PTRELA Q +V + LG +LG+KV GGT++ +D L+ VHV+VGTPGRV D+ Sbjct: 30 FEDFFLKRELLMGIFEAGFENPSPIQEEAIPIALAGRDILARAKNGTGKTAAFVIPALQQVNPKVNKIQALIMVPTRELALQTSQVCKTLGKHLGIKVMVTTGGTNLRDDIMRLEDTVHVLVGTPGRVLDL 160
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: RH6_ARATH (DEAD-box ATP-dependent RNA helicase 6 OS=Arabidopsis thaliana GN=RH6 PE=2 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 2.412e-25 Identity = 59/136 (43.38%), Postives = 86/136 (63.24%), Query Frame = 2 Query: 233 DSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRR 640 + F+ L+ +LLRGIY GFEKPS IQ+ I G D++ +A++GTGKT FC L+++D QA++L PTRELA Q +V + L YL ++V GGTS+ +D L VH++VGTPGR+ D+ ++ Sbjct: 154 NEFEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEKIDPENNVIQAVILVPTRELALQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRLYQPVHLLVGTPGRILDLAKK 289 The following BLAST results are available for this feature:
BLAST of CF832255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832255 ID=CF832255; Name=CF832255; organism=Citrus sinensis; type=EST; length=661bpback to top |