CF832255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: DBP5_USTMA (ATP-dependent RNA helicase DBP5 OS=Ustilago maydis GN=DBP5 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.496e-22 Identity = 57/140 (40.71%), Postives = 89/140 (63.57%), Query Frame = 2 Query: 236 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSL 649 SF+A+GL ENLL+GIYA ++KPS IQ++ + + ++I Q+QSGTGKTA F +L ++DY L + QA+ LAP+RELA+QI V R + + V C+ E +R + +++GTPG+ FDM++ + + Sbjct: 65 SFEALGLHENLLKGIYAMKYQKPSKIQEKALPLLLQNPPKNMIGQSQSGTGKTAAFILTMLSRIDYDLQKPQAIALAPSRELARQIMDVARTMSKFTNVTTCLCL----PDEVKRGEKITAQLIIGTPGKTFDMIKSKGI 200
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: DBP5_BOTFB (ATP-dependent RNA helicase dbp5 OS=Botryotinia fuckeliana (strain B05.10) GN=dbp5 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.259e-22 Identity = 65/175 (37.14%), Postives = 105/175 (60.00%), Query Frame = 2 Query: 137 GSQFDARQYDTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGILQQLDYGL-VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSL 649 G QY+ ++ +L G + Y ++F+ +G+ ++L+G+YA F+KPS IQ++ + + ++I Q+QSGTGKTA F IL +LD+ QAL LAP+RELA+QIE V+R++G ++ G+ V A + G +R + VVVGTPG V D+++R+S+ Sbjct: 40 GGTLQDGQYEVEV-KLSDIQGDETSPLYS--VETFEQLGIDASILKGLYAMNFKKPSKIQEKALPLLLRNPPTNMIAQSQSGTGKTAAFVITILSRLDFSKPTTPQALCLAPSRELARQIEGVIRSIGQFVDGLTVQAAIPGAV----ERNAKVNAMVVVGTPGTVMDLIKRRSI 207
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: DDX6_XENTR (Probable ATP-dependent RNA helicase ddx6 OS=Xenopus tropicalis GN=ddx6 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.560e-22 Identity = 54/144 (37.50%), Postives = 89/144 (61.81%), Query Frame = 2 Query: 233 DSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDY 661 + F+ L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L++LD QA+V+ PTRELA Q+ ++ + ++ GVKV A GGT++ +D L VHVV+ TPGR+ D++++ + D+ Sbjct: 95 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDCIQAMVIVPTRELALQVSQICIQVSKHMGGVKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDH 238
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: CSHA_BACHK (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus thuringiensis subsp. konkukian GN=cshA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.560e-22 Identity = 53/139 (38.13%), Postives = 86/139 (61.87%), Query Frame = 2 Query: 236 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLR 652 +F +GL ++LL+ + + GFE+ + IQ I +G D+I QAQ+GTGKTA F +L ++D Q +V+APTRELA Q+ + + +G + V++ GG ++ R L+ H++VGTPGR+ D + R++LR Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLR 141
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: CSHA_BACCZ (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus cereus (strain ZK / E33L) GN=cshA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.560e-22 Identity = 53/139 (38.13%), Postives = 86/139 (61.87%), Query Frame = 2 Query: 236 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLR 652 +F +GL ++LL+ + + GFE+ + IQ I +G D+I QAQ+GTGKTA F +L ++D Q +V+APTRELA Q+ + + +G + V++ GG ++ R L+ H++VGTPGR+ D + R++LR Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLR 141
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: CSHA_BACCR (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=cshA PE=3 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 5.560e-22 Identity = 53/139 (38.13%), Postives = 86/139 (61.87%), Query Frame = 2 Query: 236 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLR 652 +F +GL ++LL+ + + GFE+ + IQ I +G D+I QAQ+GTGKTA F +L ++D Q +V+APTRELA Q+ + + +G + V++ GG ++ R L+ H++VGTPGR+ D + R++LR Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLR 141
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: CSHA_BACC1 (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus cereus (strain ATCC 10987) GN=cshA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.560e-22 Identity = 53/139 (38.13%), Postives = 86/139 (61.87%), Query Frame = 2 Query: 236 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLR 652 +F +GL ++LL+ + + GFE+ + IQ I +G D+I QAQ+GTGKTA F +L ++D Q +V+APTRELA Q+ + + +G + V++ GG ++ R L+ H++VGTPGR+ D + R++LR Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLR 141
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: CSHA_BACAN (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus anthracis GN=cshA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.560e-22 Identity = 53/139 (38.13%), Postives = 86/139 (61.87%), Query Frame = 2 Query: 236 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLR 652 +F +GL ++LL+ + + GFE+ + IQ I +G D+I QAQ+GTGKTA F +L ++D Q +V+APTRELA Q+ + + +G + V++ GG ++ R L+ H++VGTPGR+ D + R++LR Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLR 141
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: CSHA_BACAH (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus thuringiensis (strain Al Hakam) GN=cshA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.560e-22 Identity = 53/139 (38.13%), Postives = 86/139 (61.87%), Query Frame = 2 Query: 236 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLR 652 +F +GL ++LL+ + + GFE+ + IQ I +G D+I QAQ+GTGKTA F +L ++D Q +V+APTRELA Q+ + + +G + V++ GG ++ R L+ H++VGTPGR+ D + R++LR Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLR 141
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: DDX6_MOUSE (Probable ATP-dependent RNA helicase DDX6 OS=Mus musculus GN=Ddx6 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.261e-22 Identity = 53/144 (36.81%), Postives = 88/144 (61.11%), Query Frame = 2 Query: 233 DSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDY 661 + F+ L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L++LD QA+V+ PTRELA Q+ ++ + ++ G KV A GGT++ +D L VHVV+ TPGR+ D++++ + D+ Sbjct: 96 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDH 239 The following BLAST results are available for this feature:
BLAST of CF832255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832255 ID=CF832255; Name=CF832255; organism=Citrus sinensis; type=EST; length=661bpback to top |