CF832255

Overview
NameCF832255
Unique NameCF832255
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length661
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3195 contig Csv1_Contig3195:95..754. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: FAL1_SCLS1 (ATP-dependent RNA helicase fal1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=fal1 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.740e-45
Identity = 98/168 (58.33%), Postives = 119/168 (70.83%), Query Frame = 2
Query:  152 ARQYDTKMNELLSTDGQDFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLR 652
            A   D KM+     D  +F TS D  V  +F  M L+ENLLRGIYAYG+E PSA+Q R IV  CKG D I QAQSGTGKTATF   +LQ +D  + + QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGT+V ED R L  G H+V GTPGRV DM+RR++LR
Sbjct:    2 AEGIDRKMD-----DRMEFTTSADVTVAPTFQDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRNLR 164          
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: FAL1_BOTFB (ATP-dependent RNA helicase fal1 OS=Botryotinia fuckeliana (strain B05.10) GN=fal1 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.740e-45
Identity = 98/168 (58.33%), Postives = 119/168 (70.83%), Query Frame = 2
Query:  152 ARQYDTKMNELLSTDGQDFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLR 652
            A   D KM+     D  +F TS D  V  +F  M L+ENLLRGIYAYG+E PSA+Q R IV  CKG D I QAQSGTGKTATF   +LQ +D  + + QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGT+V ED R L  G H+V GTPGRV DM+RR++LR
Sbjct:    2 AEGIDRKMD-----DRMEFTTSADVTVAPTFQDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRNLR 164          
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: FAL1_ASPFU (ATP-dependent RNA helicase fal1 OS=Aspergillus fumigatus GN=fal1 PE=3 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 7.972e-45
Identity = 94/156 (60.26%), Postives = 117/156 (75.00%), Query Frame = 2
Query:  188 STDGQDFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLR 652
            ++D  +F TS +  V  +F+ M L+E+LLRGIYAYG+E PSA+Q R IV  CKG D I QAQSGTGKTATF  GILQ +D  + + QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGT++ ED R L  G HVV GTPGRV DM+RR+ LR
Sbjct:    8 NSDRLEFSTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSIGILQVIDTVVRETQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLR 163          
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: FAL1_AJECN (ATP-dependent RNA helicase FAL1 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=FAL1 PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.041e-44
Identity = 95/151 (62.91%), Postives = 113/151 (74.83%), Query Frame = 2
Query:  203 DFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLR 652
            +F TS +  V  +F+ M L+ENLLRGIYAYG+E PSA+Q R IV  CKG D I QAQSGTGKTATF   ILQ +D  L + QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGT+V ED R L  G HVV GTPGRV DM+RR+ LR
Sbjct:   14 EFTTSKEVTVAPTFEDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQVIDTVLRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDHGQHVVSGTPGRVADMIRRRHLR 164          
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: FAL1_MAGGR (ATP-dependent RNA helicase FAL1 OS=Magnaporthe grisea GN=FAL1 PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.360e-44
Identity = 91/151 (60.26%), Postives = 115/151 (76.16%), Query Frame = 2
Query:  203 DFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLR 652
            +F TS +  V+ +F++M L+E+LLRGIYAYG+E PSA+Q R IV  CKG D I QAQSGTGKTATF   +LQ +D  + + QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGT+V ED R L  G H+V GTPGRV DM+RR+ LR
Sbjct:   16 EFTTSKEVTVHPTFESMALKESLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLR 166          
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: FAL1_CHAGB (ATP-dependent RNA helicase FAL1 OS=Chaetomium globosum GN=FAL1 PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.360e-44
Identity = 95/169 (56.21%), Postives = 120/169 (71.01%), Query Frame = 2
Query:  149 DARQYDTKMNELLSTDGQDFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLR 652
            D    D K +E +      F TS +  V+ +F++M L+E+LLRGIYAYG+E PSA+Q R IV  CKG D I QAQSGTGKTATF   +LQ +D  + + QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGT+V ED R L  G H+V GTPGRV DM+RR+ LR
Sbjct:    3 DGAGIDRKADEKIQ-----FSTSKEVTVHPTFESMSLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLR 166          
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: RH2_ORYSJ (DEAD-box ATP-dependent RNA helicase 2 OS=Oryza sativa subsp. japonica GN=Os01g0639100 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.776e-44
Identity = 86/143 (60.14%), Postives = 112/143 (78.32%), Query Frame = 2
Query:  224 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLR 652
            EV  SFD MG++++LLRGIYAYGFEKPSAIQQR ++P   G DVI QAQSGTGKT+     + Q +D  + + QAL+L+PTRELA Q E+VM A+GD++ ++VHAC+GG S+ ED R L+ GVHVV GTPGRV DM++R++LR
Sbjct:   28 EVISSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDFINIQVHACIGGKSIGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLR 170          
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: FAL1_NEUCR (ATP-dependent RNA helicase fal-1 OS=Neurospora crassa GN=fal-1 PE=3 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 1.776e-44
Identity = 88/142 (61.97%), Postives = 110/142 (77.46%), Query Frame = 2
Query:  227 VYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLR 652
            V+ +F++M L+E+LLRGIYAYG+E PSA+Q R IV  CKG D I QAQSGTGKTATF   +LQ +D  + + QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGT+V ED R L  G H+V GTPGRV DM+RR+ LR
Sbjct:   24 VHPTFESMSLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLR 165          
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: FAL1_SCHPO (ATP-dependent RNA helicase fal1 OS=Schizosaccharomyces pombe GN=tif412 PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.029e-44
Identity = 88/139 (63.31%), Postives = 108/139 (77.70%), Query Frame = 2
Query:  236 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLR 652
            SF+ M L+E+LLRGIYAYG+E PSA+Q R I+  CKG DVI QAQSGTGKTATF  GILQ +D  +   QAL+L+PTRELA QI+ V+ ALGD++ V+ HAC+GGTSV  D + L  G HVV GTPGRV DM+RR++LR
Sbjct:   22 SFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIAQAQSGTGKTATFSIGILQSIDLSVRDTQALILSPTRELAVQIQNVVLALGDHMNVQCHACIGGTSVGNDIKKLDYGQHVVSGTPGRVTDMIRRRNLR 160          
BLAST of CF832255 vs. ExPASy Swiss-Prot
Match: FAL1_ASPOR (ATP-dependent RNA helicase fal1 OS=Aspergillus oryzae GN=fal1 PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.029e-44
Identity = 93/156 (59.62%), Postives = 116/156 (74.36%), Query Frame = 2
Query:  188 STDGQDFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVHEDQRILQAGVHVVVGTPGRVFDMLRRQSLR 652
            ++D  +F TS +  V  +F+ M L+E+LLRGIYAYG+E PSA+Q R IV  CKG D I QAQSGTGKTATF   ILQ +D  + + QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGT++ ED R L  G HVV GTPGRV DM+RR+ LR
Sbjct:    8 NSDRMEFNTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQVIDTVVRESQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLR 163          
The following BLAST results are available for this feature:
BLAST of CF832255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FAL1_SCLS12.740e-4558.33ATP-dependent RNA helicase fal1 OS=Sclerotinia scl... [more]
FAL1_BOTFB2.740e-4558.33ATP-dependent RNA helicase fal1 OS=Botryotinia fuc... [more]
FAL1_ASPFU7.972e-4560.26ATP-dependent RNA helicase fal1 OS=Aspergillus fum... [more]
FAL1_AJECN1.041e-4462.91ATP-dependent RNA helicase FAL1 OS=Ajellomyces cap... [more]
FAL1_MAGGR1.360e-4460.26ATP-dependent RNA helicase FAL1 OS=Magnaporthe gri... [more]
FAL1_CHAGB1.360e-4456.21ATP-dependent RNA helicase FAL1 OS=Chaetomium glob... [more]
RH2_ORYSJ1.776e-4460.14DEAD-box ATP-dependent RNA helicase 2 OS=Oryza sat... [more]
FAL1_NEUCR1.776e-4461.97ATP-dependent RNA helicase fal-1 OS=Neurospora cra... [more]
FAL1_SCHPO3.029e-4463.31ATP-dependent RNA helicase fal1 OS=Schizosaccharom... [more]
FAL1_ASPOR3.029e-4459.62ATP-dependent RNA helicase fal1 OS=Aspergillus ory... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01J01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01J01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832255 ID=CF832255; Name=CF832255; organism=Citrus sinensis; type=EST; length=661bp
TTGGAAACCCTAACAACTATTTTCTCTCAAATCAATCCTCTCCTTCTCTT
TGAAGAAAAAAGAAAACCAACTCTTTCTCTCGGATTTTAATCACCATCAT
CAAAGCTTTGCAGATATGGCTGGTTTGGCACCCGAAGGATCTCAATTTGA
TGCTCGTCAGTATGACACCAAGATGAATGAACTGCTCTCTACTGATGGGC
AAGATTTCTTCACTTCTTATGATGAAGTTTATGACAGTTTTGATGCAATG
GGACTGCAGGAAAACCTTTTGAGGGGAATCTATGCCTATGGGTTTGAGAA
GCCCTCTGCTATTCAGCAAAGGGGAATTGTTCCCTTCTGCAAGGGACTTG
ACGTCATTCAGCAGGCTCAGTCTGGAACTGGGAAAACAGCAACTTTCTGC
TCTGGAATTTTGCAGCAACTTGATTATGGTCTTGTCCAATGTCAGGCCCT
GGTATTGGCACCCACTAGGGAACTAGCTCAACAGATTGAGAAAGTAATGA
GGGCACTTGGTGATTATCTTGGTGTTAAGGTTCATGCTTGTGTCGGTGGG
ACAAGTGTTCACGAGGATCAGCGCATTCTTCAAGCTGGTGTTCATGTTGT
TGTTGGCACTCCTGGACGTGTGTTTGACATGCTGCGCCGACAGTCTTTAC
GCCCTGATTAC
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