CF832264

Overview
NameCF832264
Unique NameCF832264
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7580 contig Csv1_Contig7580:571..1169. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832264 vs. ExPASy Swiss-Prot
Match: BMH2_YEAST (Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 PE=1 SV=3)

HSP 1 Score: 156.377 bits (394), Expect = 1.022e-37
Identity = 76/111 (68.47%), Postives = 93/111 (83.78%), Query Frame = 2
Query:    8 STLLAYKSAQDIALAELAPTHPIRLGLALNFSEFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGETQQ 340
            S+L AYK+A +IA  EL PTHPIRLGLALNFS FYYEI NSPD+AC+LAKQAFD+AI+ELDTL EESYKDSTLIMQLLRDNLTLWTSDI++   ++ ++   +++  + QQ
Sbjct:  149 SSLEAYKTASEIATTELPPTHPIRLGLALNFSVFYYEIQNSPDKACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDISESGQEDQQQQQQQQQQQQQQQ 259          
BLAST of CF832264 vs. ExPASy Swiss-Prot
Match: 1433B_VICFA (14-3-3-like protein B OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.335e-37
Identity = 79/108 (73.15%), Postives = 88/108 (81.48%), Query Frame = 2
Query:    5 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSEFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESG 328
            + ++ AY+SA   A AEL PTHPIRLGLALNFS FYYEILNSP+RAC+LAKQAFDEAISELDTL EESYKDSTLIMQLLRDNLTLWTSDI +D  D  K   + +  G
Sbjct:  149 DQSMKAYESATTAAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDSQKANGTAKFGG 256          
BLAST of CF832264 vs. ExPASy Swiss-Prot
Match: 1433C_SOYBN (14-3-3-like protein C OS=Glycine max GN=GF14C PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.744e-37
Identity = 80/110 (72.73%), Postives = 93/110 (84.55%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSEFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGE 331
            A+ ++ AY+ A   A AELA THPIRLGLALNFS FYYEILNSP+RAC+LAKQAFDEAISELDTL EESYKDSTLIMQLLRDNLTLWTSDI +D G+E K  +++ + G+
Sbjct:  148 ADHSMKAYQLASTTAEAELASTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPED-GEEQKVDSARADGGD 256          
BLAST of CF832264 vs. ExPASy Swiss-Prot
Match: 1433B_SOYBN (14-3-3-like protein B (Fragment) OS=Glycine max GN=GF14B PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.744e-37
Identity = 75/92 (81.52%), Postives = 84/92 (91.30%), Query Frame = 2
Query:    5 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSEFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITD 280
            E T+L+YK+AQDIA A+L PTHPIRLGLALNFS FYYEILN  D+AC +AKQAF+EAI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSD+ D
Sbjct:  151 EDTMLSYKAAQDIASADLPPTHPIRLGLALNFSVFYYEILNQSDKACAMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDVQD 242          
BLAST of CF832264 vs. ExPASy Swiss-Prot
Match: 14312_ARATH (14-3-3-like protein GF14 iota OS=Arabidopsis thaliana GN=GRF12 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.744e-37
Identity = 79/111 (71.17%), Postives = 90/111 (81.08%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSEFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAG-DEIKEAASKRESGE 331
            AE +L  Y++A   A  EL  THPIRLGLALNFS FYYEI+NSP+RAC+LAKQAFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ +D G D IK   SK+E  +
Sbjct:  151 AEQSLKGYEAATQAASTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDNIKTEESKQEQAK 261          
BLAST of CF832264 vs. ExPASy Swiss-Prot
Match: 1433E_DROME (14-3-3 protein epsilon OS=Drosophila melanogaster GN=14-3-3epsilon PE=1 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 2.278e-37
Identity = 76/97 (78.35%), Postives = 86/97 (88.66%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSEFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 292
            AE++L+AYK+A DIA+ +L PTHPIRLGLALNFS FYYEILNSPDRAC LAK AFD+AI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+  +  D
Sbjct:  145 AENSLIAYKAASDIAMNDLPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQAEEVD 241          
BLAST of CF832264 vs. ExPASy Swiss-Prot
Match: 1433D_SOYBN (14-3-3-like protein D OS=Glycine max GN=GF14D PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.278e-37
Identity = 79/109 (72.48%), Postives = 89/109 (81.65%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSEFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESG 328
            A+ ++ AY+SA   A A+L PTHPIRLGLALNFS FYYEILNSP+RAC+LAKQAFDEAISELDTL EESYKDSTLIMQLLRDNLTLWTSDI +D  D  K   + +  G
Sbjct:  148 ADQSMKAYESATAAAEADLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKVNGTAKLGG 256          
BLAST of CF832264 vs. ExPASy Swiss-Prot
Match: 14339_ARATH (14-3-3-like protein GF14 mu OS=Arabidopsis thaliana GN=GRF9 PE=1 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 2.975e-37
Identity = 76/109 (69.72%), Postives = 90/109 (82.57%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSEFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESG 328
            A+ +L AY+ A   A A+L PTHPIRLGLALNFS FYYEI+N+P+RAC+LAKQAFDEAISELDTL EESYKDSTLIMQLLRDNLTLWTSDI+++ GD+  +     + G
Sbjct:  148 ADQSLKAYEIATTAAEAKLPPTHPIRLGLALNFSVFYYEIMNAPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDISEEGGDDAHKTNGSAKPG 256          
BLAST of CF832264 vs. ExPASy Swiss-Prot
Match: RAD24_SCHPO (DNA damage checkpoint protein rad24 OS=Schizosaccharomyces pombe GN=rad24 PE=1 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 3.885e-37
Identity = 77/90 (85.56%), Postives = 82/90 (91.11%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSEFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSD 271
            A+ +L  YK+A +IA AELAPTHPIRLGLALNFS FYYEILNSPDRAC LAKQAFDEAISELD+L EESYKDSTLIMQLLRDNLTLWTSD
Sbjct:  147 ADQSLEGYKAASEIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACYLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSD 236          
BLAST of CF832264 vs. ExPASy Swiss-Prot
Match: 14310_SOLLC (14-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10 PE=2 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 8.655e-37
Identity = 74/93 (79.57%), Postives = 85/93 (91.40%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSEFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITD 280
            AE T+ +YK+AQ+IAL +L PTHPIRLGLALNFS FY+EILNS D+AC++AKQAF+EAI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSD  D
Sbjct:  155 AEDTMNSYKAAQEIALTDLPPTHPIRLGLALNFSVFYFEILNSSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQD 247          
The following BLAST results are available for this feature:
BLAST of CF832264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
BMH2_YEAST1.022e-3768.47Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 P... [more]
1433B_VICFA1.335e-3773.1514-3-3-like protein B OS=Vicia faba PE=2 SV=1[more]
1433C_SOYBN1.744e-3772.7314-3-3-like protein C OS=Glycine max GN=GF14C PE=2... [more]
1433B_SOYBN1.744e-3781.5214-3-3-like protein B (Fragment) OS=Glycine max GN... [more]
14312_ARATH1.744e-3771.1714-3-3-like protein GF14 iota OS=Arabidopsis thali... [more]
1433E_DROME2.278e-3778.3514-3-3 protein epsilon OS=Drosophila melanogaster ... [more]
1433D_SOYBN2.278e-3772.4814-3-3-like protein D OS=Glycine max GN=GF14D PE=2... [more]
14339_ARATH2.975e-3769.7214-3-3-like protein GF14 mu OS=Arabidopsis thalian... [more]
RAD24_SCHPO3.885e-3785.56DNA damage checkpoint protein rad24 OS=Schizosacch... [more]
14310_SOLLC8.655e-3779.5714-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01J10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01J10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832264 ID=CF832264; Name=CF832264; organism=Citrus sinensis; type=EST; length=598bp
TGCGGAGAGCACTTTGTTGGCCTACAAGTCAGCTCAGGATATTGCTTTAG
CTGAATTGGCCCCTACTCACCCCATAAGGCTGGGACTTGCACTCAACTTC
TCTGAGTTCTACTATGAAATCCTTAACTCACCAGATCGTGCATGCAATCT
TGCGAAGCAGGCTTTTGATGAGGCCATTTCTGAGCTTGATACCTTGGGTG
AAGAATCATACAAGGACAGTACATTGATTATGCAGCTTCTCCGAGATAAT
CTGACACTTTGGACTTCTGATATCACTGATGATGCTGGAGATGAGATTAA
GGAAGCAGCATCAAAACGTGAATCAGGGGAGACGCAGCAGTGATGAATAA
TGAGTTCAGTTCATAGGATATGTATCTGTATTTTTATCTTGTGGCTTTTA
TTTTACATGGATGCCATGTGGGTTGTTTTAGCAGGATATTCTCATGAACT
GATAATCTTGAGTGTTGGCTGCACTTAGGGTTCATGTGTTCCAACAGATT
GTAAACTAGATTTAATTATTGATGAGAAGTATTTGGTTTGGGTTTCATAT
GTAGTGTTTTCAGTGCTATGCTAAACTTTAGAATTGAAATTAAAAAAA
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