CF832264

Overview
NameCF832264
Unique NameCF832264
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7580 contig Csv1_Contig7580:571..1169. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832264 vs. ExPASy Swiss-Prot
Match: 1433Z_PONAB (14-3-3 protein zeta/delta OS=Pongo abelii GN=YWHAZ PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.606e-33
Identity = 69/91 (75.82%), Postives = 78/91 (85.71%), Query Frame = 2
Query:   20 AYKSAQDIALAELAPTHPIRLGLALNFSEFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 292
            AY+ A +I+  E+ PTHPIRLGLALNFS FYYEILNSP++AC+LAK AFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD   D  +
Sbjct:  148 AYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAE 238          
BLAST of CF832264 vs. ExPASy Swiss-Prot
Match: 1433Z_MOUSE (14-3-3 protein zeta/delta OS=Mus musculus GN=Ywhaz PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.606e-33
Identity = 69/91 (75.82%), Postives = 78/91 (85.71%), Query Frame = 2
Query:   20 AYKSAQDIALAELAPTHPIRLGLALNFSEFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 292
            AY+ A +I+  E+ PTHPIRLGLALNFS FYYEILNSP++AC+LAK AFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD   D  +
Sbjct:  148 AYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAE 238          
BLAST of CF832264 vs. ExPASy Swiss-Prot
Match: 1433Z_HUMAN (14-3-3 protein zeta/delta OS=Homo sapiens GN=YWHAZ PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.606e-33
Identity = 69/91 (75.82%), Postives = 78/91 (85.71%), Query Frame = 2
Query:   20 AYKSAQDIALAELAPTHPIRLGLALNFSEFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 292
            AY+ A +I+  E+ PTHPIRLGLALNFS FYYEILNSP++AC+LAK AFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD   D  +
Sbjct:  148 AYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAE 238          
BLAST of CF832264 vs. ExPASy Swiss-Prot
Match: 1433Z_BOVIN (14-3-3 protein zeta/delta OS=Bos taurus GN=YWHAZ PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.606e-33
Identity = 69/91 (75.82%), Postives = 78/91 (85.71%), Query Frame = 2
Query:   20 AYKSAQDIALAELAPTHPIRLGLALNFSEFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 292
            AY+ A +I+  E+ PTHPIRLGLALNFS FYYEILNSP++AC+LAK AFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD   D  +
Sbjct:  148 AYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAE 238          
BLAST of CF832264 vs. ExPASy Swiss-Prot
Match: 14332_CAEEL (14-3-3-like protein 2 OS=Caenorhabditis elegans GN=ftt-2 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 3.403e-33
Identity = 69/96 (71.88%), Postives = 80/96 (83.33%), Query Frame = 2
Query:    5 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSEFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 292
            E +  +Y+ A DIA  ++ PTHPIRLGLALNFS F+YEILN+PD+AC LAKQAFD+AI+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD   D  D
Sbjct:  145 EKSQQSYQEAFDIAKDKMQPTHPIRLGLALNFSVFFYEILNAPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDAATDDTD 240          
BLAST of CF832264 vs. ExPASy Swiss-Prot
Match: 14311_ARATH (14-3-3-like protein GF14 omicron OS=Arabidopsis thaliana GN=GRF11 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 3.403e-33
Identity = 69/93 (74.19%), Postives = 82/93 (88.17%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSEFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITD 280
            A+ +L AY++A   A  EL+ THPIRLGLALNFS FYYEILNSP+RAC+LAK+AFDEAI+ELD+L E+SYKDSTLIMQLLRDNLTLWTSD+ +
Sbjct:  146 ADLSLKAYEAATSSASTELSTTHPIRLGLALNFSVFYYEILNSPERACHLAKRAFDEAIAELDSLNEDSYKDSTLIMQLLRDNLTLWTSDLEE 238          
BLAST of CF832264 vs. ExPASy Swiss-Prot
Match: 1433B_XENTR (14-3-3 protein beta/alpha OS=Xenopus tropicalis GN=ywhab PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 5.805e-33
Identity = 68/91 (74.73%), Postives = 79/91 (86.81%), Query Frame = 2
Query:   20 AYKSAQDIALAELAPTHPIRLGLALNFSEFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 292
            AY+ A +I+ +E+ PTHPIRLGLALNFS FYYEILNSP++AC+LAK AFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTS+   +  D
Sbjct:  148 AYQEAFEISKSEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKSAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGEEAD 238          
BLAST of CF832264 vs. ExPASy Swiss-Prot
Match: 143GB_XENLA (14-3-3 protein gamma-B OS=Xenopus laevis GN=ywhag-B PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 9.903e-33
Identity = 68/97 (70.10%), Postives = 80/97 (82.47%), Query Frame = 2
Query:    5 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSEFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDE 295
            ES+  AY  A +I+   + PTHPIRLGLALN+S FYYEI N+P++AC+LAK AFD+AI+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD  DD G E
Sbjct:  148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGE 244          
BLAST of CF832264 vs. ExPASy Swiss-Prot
Match: 143GA_XENLA (14-3-3 protein gamma-A OS=Xenopus laevis GN=ywhag-A PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 9.903e-33
Identity = 68/97 (70.10%), Postives = 80/97 (82.47%), Query Frame = 2
Query:    5 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSEFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDE 295
            ES+  AY  A +I+   + PTHPIRLGLALN+S FYYEI N+P++AC+LAK AFD+AI+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD  DD G E
Sbjct:  148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGE 244          
BLAST of CF832264 vs. ExPASy Swiss-Prot
Match: 1433G_RAT (14-3-3 protein gamma OS=Rattus norvegicus GN=Ywhag PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 9.903e-33
Identity = 68/97 (70.10%), Postives = 80/97 (82.47%), Query Frame = 2
Query:    5 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSEFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDE 295
            ES+  AY  A +I+   + PTHPIRLGLALN+S FYYEI N+P++AC+LAK AFD+AI+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD  DD G E
Sbjct:  148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGE 244          
The following BLAST results are available for this feature:
BLAST of CF832264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433Z_PONAB2.606e-3375.8214-3-3 protein zeta/delta OS=Pongo abelii GN=YWHAZ... [more]
1433Z_MOUSE2.606e-3375.8214-3-3 protein zeta/delta OS=Mus musculus GN=Ywhaz... [more]
1433Z_HUMAN2.606e-3375.8214-3-3 protein zeta/delta OS=Homo sapiens GN=YWHAZ... [more]
1433Z_BOVIN2.606e-3375.8214-3-3 protein zeta/delta OS=Bos taurus GN=YWHAZ P... [more]
14332_CAEEL3.403e-3371.8814-3-3-like protein 2 OS=Caenorhabditis elegans GN... [more]
14311_ARATH3.403e-3374.1914-3-3-like protein GF14 omicron OS=Arabidopsis th... [more]
1433B_XENTR5.805e-3374.7314-3-3 protein beta/alpha OS=Xenopus tropicalis GN... [more]
143GB_XENLA9.903e-3370.1014-3-3 protein gamma-B OS=Xenopus laevis GN=ywhag-... [more]
143GA_XENLA9.903e-3370.1014-3-3 protein gamma-A OS=Xenopus laevis GN=ywhag-... [more]
1433G_RAT9.903e-3370.1014-3-3 protein gamma OS=Rattus norvegicus GN=Ywhag... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01J10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01J10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832264 ID=CF832264; Name=CF832264; organism=Citrus sinensis; type=EST; length=598bp
TGCGGAGAGCACTTTGTTGGCCTACAAGTCAGCTCAGGATATTGCTTTAG
CTGAATTGGCCCCTACTCACCCCATAAGGCTGGGACTTGCACTCAACTTC
TCTGAGTTCTACTATGAAATCCTTAACTCACCAGATCGTGCATGCAATCT
TGCGAAGCAGGCTTTTGATGAGGCCATTTCTGAGCTTGATACCTTGGGTG
AAGAATCATACAAGGACAGTACATTGATTATGCAGCTTCTCCGAGATAAT
CTGACACTTTGGACTTCTGATATCACTGATGATGCTGGAGATGAGATTAA
GGAAGCAGCATCAAAACGTGAATCAGGGGAGACGCAGCAGTGATGAATAA
TGAGTTCAGTTCATAGGATATGTATCTGTATTTTTATCTTGTGGCTTTTA
TTTTACATGGATGCCATGTGGGTTGTTTTAGCAGGATATTCTCATGAACT
GATAATCTTGAGTGTTGGCTGCACTTAGGGTTCATGTGTTCCAACAGATT
GTAAACTAGATTTAATTATTGATGAGAAGTATTTGGTTTGGGTTTCATAT
GTAGTGTTTTCAGTGCTATGCTAAACTTTAGAATTGAAATTAAAAAAA
back to top