CF832282

Overview
NameCF832282
Unique NameCF832282
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length671
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832282 vs. ExPASy Swiss-Prot
Match: SCRK2_MAIZE (Fructokinase-2 OS=Zea mays GN=FRK2 PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.395e-52
Identity = 102/170 (60.00%), Postives = 127/170 (74.71%), Query Frame = -2
Query:  161 AMKAAKEAGALLLYDPNLRVPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLPGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYPKSFRGAVDAFHVNTVDTTGAGDAFVGAFLGKLVDDQSVFEDEPRLREILKFANACGAITTPKKGAIPALPTEFEALNLLKGA 670
            AM+AAK AG L  YDPN+R+PLWPSP+ ARE I+SIW +A+ IKVSD E+ FL   D  D+++ LSLW   LKLL+VT G+ GCRY+ K F+G+V  F V+TVDTTGAGDAFVG+ L  +  D S+F +E +LRE LKF+NACGAI T KKGAIPALPT   A +L+  A
Sbjct:  165 AMRAAKAAGVLCSYDPNVRLPLWPSPDAAREGILSIWKEADFIKVSDDEVAFLTRGDANDEKNVLSLWFDGLKLLVVTDGDKGCRYFTKDFKGSVPGFKVDTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICTTKKGAIPALPTVATAQDLIAKA 334          
BLAST of CF832282 vs. ExPASy Swiss-Prot
Match: SCRK2_ORYSJ (Fructokinase-2 OS=Oryza sativa subsp. japonica GN=FRK2 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 6.922e-52
Identity = 102/170 (60.00%), Postives = 124/170 (72.94%), Query Frame = -2
Query:  161 AMKAAKEAGALLLYDPNLRVPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLPGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYPKSFRGAVDAFHVNTVDTTGAGDAFVGAFLGKLVDDQSVFEDEPRLREILKFANACGAITTPKKGAIPALPTEFEALNLLKGA 670
            AM+AAK AG L  YDPN+R+PLWPS + AR  I+SIW +A+ IKVSD E+ FL   D  D+++ LSLW   LKLL+VT GE GCRY+ K F+G+V  F VNTVDTTGAGDAFVG+ L  +  D S+F +E +LRE LKF+NACGAI T KKGAIPALPT   A  L+  A
Sbjct:  165 AMRAAKSAGILCSYDPNVRLPLWPSEDAARAGILSIWKEADFIKVSDDEVAFLTQGDANDEKNVLSLWFDGLKLLIVTDGEKGCRYFTKDFKGSVPGFSVNTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICTTKKGAIPALPTVAVAQELISKA 334          
BLAST of CF832282 vs. ExPASy Swiss-Prot
Match: SCRK2_ORYSI (Fructokinase-2 OS=Oryza sativa subsp. indica GN=FRK2 PE=1 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 6.922e-52
Identity = 102/170 (60.00%), Postives = 124/170 (72.94%), Query Frame = -2
Query:  161 AMKAAKEAGALLLYDPNLRVPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLPGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYPKSFRGAVDAFHVNTVDTTGAGDAFVGAFLGKLVDDQSVFEDEPRLREILKFANACGAITTPKKGAIPALPTEFEALNLLKGA 670
            AM+AAK AG L  YDPN+R+PLWPS + AR  I+SIW +A+ IKVSD E+ FL   D  D+++ LSLW   LKLL+VT GE GCRY+ K F+G+V  F VNTVDTTGAGDAFVG+ L  +  D S+F +E +LRE LKF+NACGAI T KKGAIPALPT   A  L+  A
Sbjct:  165 AMRAAKSAGILCSYDPNVRLPLWPSEDAARAGILSIWKEADFIKVSDDEVAFLTQGDANDEKNVLSLWFDGLKLLIVTDGEKGCRYFTKDFKGSVPGFSVNTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICTTKKGAIPALPTVAVAQELISKA 334          
BLAST of CF832282 vs. ExPASy Swiss-Prot
Match: SCRK5_ARATH (Putative fructokinase-5 OS=Arabidopsis thaliana GN=At4g10260 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 7.653e-51
Identity = 101/168 (60.12%), Postives = 122/168 (72.62%), Query Frame = -2
Query:  167 AMKAAKEAGALLLYDPNLRVPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLPGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYPKSFRGAVDAFHVNTVDTTGAGDAFVGAFLGKLVDDQSVFEDEPRLREILKFANACGAITTPKKGAIPALPTEFEALNLLK 670
            AMK AK+AG LL YDPN+R+PLWPS E A E I SIW++A++IKVSD E+ FL   D   D+  LSL H  LKLL+VT GE GCRYY K F+G V  + V  VDTTGAGD+FVGAFL  L  D S+ +DE +L+E L FANACGA+ T +KGAIPALPT  +A  L+K
Sbjct:  153 AMKTAKDAGVLLSYDPNVRLPLWPSTEAAIEGIKSIWNEADIIKVSDDEVTFLTRGDAEKDDVVLSLMHDKLKLLIVTDGEKGCRYYTKKFKGRVPGYAVKAVDTTGAGDSFVGAFLVSLGKDGSILDDEGKLKEALAFANACGAVCTTQKGAIPALPTPADAQKLMK 320          
BLAST of CF832282 vs. ExPASy Swiss-Prot
Match: SCRK_VIBAL (Fructokinase OS=Vibrio alginolyticus GN=scrK PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.408e-20
Identity = 61/167 (36.53%), Postives = 92/167 (55.09%), Query Frame = -2
Query:  170 AMKAAKEAGALLLYDPNLRVPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLPGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYPKSFRGAVDAFHVNTVDTTGAGDAFVGAFLGKLVDDQSVFEDEPRLREILKFANACGAITTPKKGAIPALPTEFEALNLL 670
            A+K AK AG  + +DPNLR  +W    E +  +M     A+V+K S+ EL FL  S  +  +    +   N+ L+LVT G  G     +S    +    V+ +DTTGAGDAFVG  L  L    + +++ P +   +++AN CGA+ T +KGA+ ALPT+ E L  +
Sbjct:  141 AIKRAKAAGGFISFDPNLRDEVWQDQSEIQAVVMKAVAMADVVKFSEEELLFLTDSTSM-AQGLQQIAAMNIALVLVTQGAKGVWRVFESQSELITGQVVSPIDTTGAGDAFVGGLLACL-SRHADWKNHPVVSSAIQWANGCGALATTQKGAMTALPTQTELLRFI 305          
BLAST of CF832282 vs. ExPASy Swiss-Prot
Match: YDJE_BACSU (Uncharacterized sugar kinase ydjE OS=Bacillus subtilis GN=ydjE PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.834e-18
Identity = 64/166 (38.55%), Postives = 90/166 (54.22%), Query Frame = -2
Query:  194 MKAAKEAGALLLYDPNLRVPLWPSPEEAREQIMSIWDKA----EVIKVSDVELEFLPGSDKIDDESALSLWHP-NLKLLLVTLGEHGCRYYPKSFRGAVDAFHVNTVDTTGAGDAFVGAFLGKLVDD---QSVFEDEPRLREILKFANACGAITTPKKGAIPALPT 667
            M  AK+ G  + +DPN R  LW        + +S+  KA    + +KVSD ELE + G    D E  +++ H     ++ VTLG+ G        R  + +  V ++D+TGAGDAFVGA L +L +    QSV  D  +LREI+ FAN  GA+   K GAI ALP+
Sbjct:  152 MSIAKDNGQFISFDPNYREDLWRGRVS---EFVSVAKKAIAVSDFVKVSDEELEIISGVK--DHEKGVAILHEIGANIVAVTLGKSGTLLSNGKDREIIPSIPVTSIDSTGAGDAFVGAALYQLANTDQIQSVDADFVKLREIVAFANKVGALVCTKIGAIDALPS 312          
BLAST of CF832282 vs. ExPASy Swiss-Prot
Match: SCRK_KLEPN (Fructokinase OS=Klebsiella pneumoniae GN=scrK PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.007e-18
Identity = 63/161 (39.13%), Postives = 84/161 (52.17%), Query Frame = -2
Query:  197 AMKAAKEAGALLLYDPNLRVPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLPGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYPKSFRGAVDAF---HVNTVDTTGAGDAFVGAFLGKLVDDQSVFEDEPRLREILKFANACGAITTPKKGAIPALP 670
            A++A K AG  + +DPN+R  LW  P++ R+ +      A+ IK+S+ EL F+ GSD I    A         LLLVT G+ G +    + RG V  F    V  VDTTGAGDAFV   L  L     + ++   L   L  A  CGA+ T  KGA+ ALP
Sbjct:  142 ALEAIKRAGGYVSFDPNIRSDLWQDPQDLRDCLDRALALADAIKLSEEELAFISGSDDIVSGIARLNARFQPTLLLVTQGKAGVQ---AALRGQVSHFPARPVVAVDTTGAGDAFVAGLLAGLA-AHGIPDNLAALAPDLALAQTCGALATTAKGAMTALP 298          
BLAST of CF832282 vs. ExPASy Swiss-Prot
Match: SCRK_ECOLX (Fructokinase OS=Escherichia coli GN=cscK PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 9.443e-17
Identity = 58/165 (35.15%), Postives = 79/165 (47.88%), Query Frame = -2
Query:  185 AMKAAKEAGALLLYDPNLRVPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLPGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYPKSFRGAVDAF---HVNTVDTTGAGDAFVGAFLGKLVDDQSVFEDEPRLREILKFANACGAITTPKKGAIPALPTEFE 670
            AM A + AG  + +DPN+R  LW      R  +      A+V+K+S+ E   + G  + D +         + +LLVT G  G       +RG V  F    VN VD+TGAGDAFV   L  L     +  DE  +R I+  A  CGA+    KGA+ ALP   E
Sbjct:  142 AMTAIRHAGGFVSFDPNIREDLWQDEHLLRLCLRQALQLADVVKLSEEEWRLISGKTQNDRDICALAKEYEIAMLLVTKGAEG---VVVCYRGQVHHFAGMSVNCVDSTGAGDAFVAGLLTGL-SSTGLSTDEREMRRIIDLAQRCGALAVTAKGAMTALPCRQE 302          
BLAST of CF832282 vs. ExPASy Swiss-Prot
Match: SCRK_SALTY (Fructokinase OS=Salmonella typhimurium GN=scrK PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.276e-13
Identity = 55/158 (34.81%), Postives = 77/158 (48.73%), Query Frame = -2
Query:  197 AMKAAKEAGALLLYDPNLRVPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLPGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYPKSFRGAVDAFHVNTVDTTGAGDAFVGAFLGKLVDDQSVFEDEPRLREILKFANACGAITTPKKGAIPALP 670
            AM++ + AG  + +DPN+R  LW         +      A V+K+S+ EL F+  S+ +    A        +LLLVT G+ G     +      +A  V +VDTTGAGDAFV   L  L  +  +  D   L   L  A  CGA+ T  KGA+ ALP
Sbjct:  142 AMESIRSAGGRVSFDPNIRPDLWQDQALLLACLDRALHMANVVKLSEEELVFISSSNDLAYGIASVTERYQPELLLVTRGKAGVLAAFQQKFTHFNARPVASVDTTGAGDAFVAGLLASLAAN-GMPTDMTALEPTLTLAQTCGALATTAKGAMTALP 298          
BLAST of CF832282 vs. ExPASy Swiss-Prot
Match: SCRK_SALTH (Fructokinase (Fragment) OS=Salmonella thompson GN=scrK PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.276e-13
Identity = 55/158 (34.81%), Postives = 77/158 (48.73%), Query Frame = -2
Query:  197 AMKAAKEAGALLLYDPNLRVPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLPGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYPKSFRGAVDAFHVNTVDTTGAGDAFVGAFLGKLVDDQSVFEDEPRLREILKFANACGAITTPKKGAIPALP 670
            AM++ + AG  + +DPN+R  LW         +      A V+K+S+ EL F+  S+ +    A        +LLLVT G+ G     +      +A  V +VDTTGAGDAFV   L  L  +  +  D   L   L  A  CGA+ T  KGA+ ALP
Sbjct:   56 AMESIRSAGGRVSFDPNIRPDLWQDQALLLACLDRALHMANVVKLSEEELVFISSSNDLAYGIASVTERYQPELLLVTRGKAGVLAAFQQKFTHFNARPVASVDTTGAGDAFVAGLLASLAAN-GMPTDMTALEPTLTLAQTCGALATTAKGAMTALP 212          
The following BLAST results are available for this feature:
BLAST of CF832282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
SCRK2_MAIZE1.395e-5260.00Fructokinase-2 OS=Zea mays GN=FRK2 PE=1 SV=1[more]
SCRK2_ORYSJ6.922e-5260.00Fructokinase-2 OS=Oryza sativa subsp. japonica GN=... [more]
SCRK2_ORYSI6.922e-5260.00Fructokinase-2 OS=Oryza sativa subsp. indica GN=FR... [more]
SCRK5_ARATH7.653e-5160.12Putative fructokinase-5 OS=Arabidopsis thaliana GN... [more]
SCRK_VIBAL1.408e-2036.53Fructokinase OS=Vibrio alginolyticus GN=scrK PE=3 ... [more]
YDJE_BACSU3.834e-1838.55Uncharacterized sugar kinase ydjE OS=Bacillus subt... [more]
SCRK_KLEPN5.007e-1839.13Fructokinase OS=Klebsiella pneumoniae GN=scrK PE=3... [more]
SCRK_ECOLX9.443e-1735.15Fructokinase OS=Escherichia coli GN=cscK PE=3 SV=2[more]
SCRK_SALTY1.276e-1334.81Fructokinase OS=Salmonella typhimurium GN=scrK PE=... [more]
SCRK_SALTH1.276e-1334.81Fructokinase (Fragment) OS=Salmonella thompson GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01J20_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01J20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832282 ID=CF832282; Name=CF832282; organism=Citrus sinensis; type=EST; length=671bp
TTTTTTTTTTTTTTTTTCTTTAATACAGAAGAAACTTCTTTTCATTGAAT
TCAAAGCAACTTCCGTAAAAACAAAAAGAAAATTCAAAATACAAACAAAA
AGAAAATTCAAAATACAAACAAAAAAAAAAAATTGGAACTAATAATTTTG
TTTATTATTACGCTCCTTTGAGTAAGTTGAGAGCTTCAAACTCTGTGGGT
AGAGCTGGAATTGCTCCCTTCTTGGGGGTAGTGATGGCTCCACAGGCATT
TGCAAATTTCAATATCTCCCGCAACCTTGGTTCATCCTCAAAAACAGATT
GGTCATCAACAAGCTTCCCTAAAAAAGCACCAACAAATGCATCACCAGCG
CCGGTTGTATCTACTGTGTTCACATGAAAAGCATCCACTGCTCCTCTGAA
ACTCTTGGGGTAGTATCGGCAGCCATGCTCACCAAGGGTGACCAAAAGGA
GTTTCAAGTTGGGATGCCAAAGCGACAATGCTGATTCATCATCAATCTTG
TCACTCCCGGGGAGGAATTCAAGCTCCACATCACTGACTTTGATTACCTC
GGCCTTGTCCCAGATGCTCATTATCTGCTCGCGCGCCTCCTCCGGCGAGG
GCCACAACGGTACCCGGAGGTTGGGGTCGTATAAAAGAAGGGCTCCTGCT
TCCTTGGCTGCTTTCATTGCC
back to top