CF832284

Overview
NameCF832284
Unique NameCF832284
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length354
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF832284 vs. ExPASy Swiss-Prot
Match: RS12_SULAC (30S ribosomal protein S12P OS=Sulfolobus acidocaldarius GN=rps12p PE=3 SV=3)

HSP 1 Score: 65.4698 bits (158), Expect = 9.898e-11
Identity = 32/51 (62.75%), Postives = 43/51 (84.31%), Query Frame = -3 
Query:  203 NYIEENDEVLIAGFGRK-GHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKP 352
            N+I+E+DEV+IAG G   G ++GD+PGVR+KVV V+GVSL AL+K KK+KP
Sbjct:   95 NFIDEHDEVVIAGIGGTLGRSMGDLPGVRYKVVMVNGVSLDALYKGKKQKP 145
The following BLAST results are available for this feature:
BLAST of CF832284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
RS12_SULAC9.898e-1162.7530S ribosomal protein S12P OS=Sulfolobus acidocald... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01J23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01J23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832284 ID=CF832284; Name=CF832284; organism=Citrus sinensis; type=EST; length=354bp
TTTTTTTTTTTTTTCACAAACCACTCAAGTAGAAGAGACAGATCCCTTTT
TACTAATAGTCTCAACAGAGGGAAAAAAACCAAAAACTTCTCTCAACAGC
AGTACATGATAAAGGAAAACAGTAATCAACGGGGATTAATGAAAATAAAG
TGCTAAAAAAAGAAAACATGGTGAAGTATCTTGAATCAGGAGTTTAGGAT
CTTGGTTTCTCCTTCTTCTCCTTGAAGAGGGCCAGAAGAGACACGCCTGA
AACCTTGACAACCTTAAATCTAACACCAGGAATATCTCCCACAGCATGCC
CCTTTCGACCAAATCCTGCAATAAGTACCTCGTCATTTTCTTCAATGTAG
TTCA
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