CF832287
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832287 vs. ExPASy Swiss-Prot
Match: RS23_BRUMA (40S ribosomal protein S23 OS=Brugia malayi GN=rps-23 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.153e-17 Identity = 41/53 (77.36%), Postives = 47/53 (88.68%), Query Frame = 1 Query: 1 LNYIY*NDEVLIAGFGRNGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 159 LN+I NDEVL+AGFGR GHAVGDIPGVRFK+VKV+ SL+ALFK KKE+PRS Sbjct: 91 LNFIEENDEVLVAGFGRKGHAVGDIPGVRFKIVKVANTSLIALFKGKKERPRS 143
BLAST of CF832287 vs. ExPASy Swiss-Prot
Match: RS23_ASPFU (40S ribosomal protein S23 OS=Aspergillus fumigatus GN=rps23 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.153e-17 Identity = 44/53 (83.02%), Postives = 47/53 (88.68%), Query Frame = 1 Query: 1 LNYIY*NDEVLIAGFGRNGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 159 LN+I NDEVL+AGFGR G A GDIPGVRFKVVKVSGV LLAL+KEKKEKPRS Sbjct: 93 LNFIDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVGLLALWKEKKEKPRS 145
BLAST of CF832287 vs. ExPASy Swiss-Prot
Match: RS23_NEUCR (40S ribosomal protein S23 OS=Neurospora crassa GN=rps-23 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.118e-17 Identity = 43/53 (81.13%), Postives = 47/53 (88.68%), Query Frame = 1 Query: 1 LNYIY*NDEVLIAGFGRNGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 159 LN++ NDEVL+AGFGR G A GDIPGVRFKVVKVSGV LLAL+KEKKEKPRS Sbjct: 93 LNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVGLLALWKEKKEKPRS 145
BLAST of CF832287 vs. ExPASy Swiss-Prot
Match: RS23_CIOIN (40S ribosomal protein S23 OS=Ciona intestinalis GN=RPS23 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.378e-17 Identity = 42/53 (79.25%), Postives = 47/53 (88.68%), Query Frame = 1 Query: 1 LNYIY*NDEVLIAGFGRNGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 159 LNYI NDEVL+AGFGR+GHAVGDIPGVRFK+VKV+ VSL ALF KKE+PRS Sbjct: 91 LNYIEENDEVLVAGFGRSGHAVGDIPGVRFKIVKVANVSLHALFTGKKERPRS 143
BLAST of CF832287 vs. ExPASy Swiss-Prot
Match: RS23_CAEEL (40S ribosomal protein S23 OS=Caenorhabditis elegans GN=rps-23 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.024e-17 Identity = 39/53 (73.58%), Postives = 48/53 (90.57%), Query Frame = 1 Query: 1 LNYIY*NDEVLIAGFGRNGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 159 LN++ NDEVL++GFGR+GHAVGDIPGVRFK+VKV+ SL+ALFK KKE+PRS Sbjct: 91 LNFVEENDEVLVSGFGRSGHAVGDIPGVRFKIVKVANTSLIALFKGKKERPRS 143
BLAST of CF832287 vs. ExPASy Swiss-Prot
Match: RS23_SCHPO (40S ribosomal protein S23 OS=Schizosaccharomyces pombe GN=rps23a PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 2.951e-15 Identity = 39/53 (73.58%), Postives = 45/53 (84.91%), Query Frame = 1 Query: 1 LNYIY*NDEVLIAGFGRNGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 159 LN++ NDEVL++GFGR G A GDIPGVRFKVVKV+GV L ALF EKKEKPR+ Sbjct: 91 LNFVDENDEVLLSGFGRKGKAKGDIPGVRFKVVKVAGVGLSALFHEKKEKPRA 143
BLAST of CF832287 vs. ExPASy Swiss-Prot
Match: RS12_TETTH (40S ribosomal protein S12 OS=Tetrahymena thermophila PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.854e-15 Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 1 Query: 1 LNYIY*NDEVLIAGFGRNGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEK 150 LN++ NDEVL+AG GR GHAVGDIPGVRFKVV V G+SLLALFK KKEK Sbjct: 92 LNFLAENDEVLVAGLGRQGHAVGDIPGVRFKVVCVKGISLLALFKGKKEK 141
BLAST of CF832287 vs. ExPASy Swiss-Prot
Match: RS23_GILMI (40S ribosomal protein S23 OS=Gillichthys mirabilis GN=rps23 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.913e-14 Identity = 37/53 (69.81%), Postives = 45/53 (84.91%), Query Frame = 1 Query: 1 LNYIY*NDEVLIAGFGRNGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 159 LN+ NDEVL+AGFGR HAVGDIPGVRFKVV+++ VSLLAL+K KE+P+S Sbjct: 91 LNFXEENDEVLVAGFGRKXHAVGDIPGVRFKVVEMANVSLLALYKGXKERPKS 143
BLAST of CF832287 vs. ExPASy Swiss-Prot
Match: RS23_DICDI (40S ribosomal protein S23 OS=Dictyostelium discoideum GN=rps23 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.913e-14 Identity = 36/51 (70.59%), Postives = 45/51 (88.24%), Query Frame = 1 Query: 1 LNYIY*NDEVLIAGFGRNGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKP 153 LNYI ND+VL+AG GR+GH+VGDIPGVRFKVVKVS VSL+A+++ K+KP Sbjct: 91 LNYIQENDKVLVAGLGRSGHSVGDIPGVRFKVVKVSSVSLIAIYRGIKDKP 141
BLAST of CF832287 vs. ExPASy Swiss-Prot
Match: RS23_ENCCU (40S ribosomal protein S23 OS=Encephalitozoon cuniculi GN=RPS23 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.979e-11 Identity = 32/51 (62.75%), Postives = 38/51 (74.51%), Query Frame = 1 Query: 1 LNYIY*NDEVLIAGFGRNGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKP 153 + YI NDEV + GFG+ G +VGDIPG+RFKV KV VSL A+F KKEKP Sbjct: 88 VTYIESNDEVTVEGFGKKGRSVGDIPGIRFKVCKVQNVSLHAIFTGKKEKP 138 The following BLAST results are available for this feature:
BLAST of CF832287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832287 ID=CF832287; Name=CF832287; organism=Citrus sinensis; type=EST; length=358bpback to top |