CF832292

Overview
NameCF832292
Unique NameCF832292
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CALM_PARTE (Calmodulin OS=Paramecium tetraurelia GN=CAM PE=1 SV=3)

HSP 1 Score: 235.728 bits (600), Expect = 2.009e-61
Identity = 116/136 (85.29%), Postives = 128/136 (94.12%), Query Frame = 3
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 416
            +EAF+LFDK  DG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMK+ DSEEEL EAF+VFD+D NG ISAAELRHVMTNLGEKLTD+EVDEMIREAD+DGDG INYEEFV++M++K
Sbjct:   14 KEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVSK 149          
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CALM_PNECA (Calmodulin OS=Pneumocystis carinii PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.427e-61
Identity = 116/136 (85.29%), Postives = 126/136 (92.65%), Query Frame = 3
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 416
            +EAFSLFDK  DG ITTKELG VMRSLGQNPTEAELQDM+NEVDADGNGTIDFPEFL +MARKMKD DSEEE++EAF+VFDKD NG ISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG I+Y EFVK+M++K
Sbjct:   16 KEAFSLFDKDGDGSITTKELGIVMRSLGQNPTEAELQDMVNEVDADGNGTIDFPEFLAMMARKMKDVDSEEEIREAFKVFDKDGNGIISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGVIDYSEFVKMMLSK 151          
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CALM_DICDI (Calmodulin OS=Dictyostelium discoideum GN=calA PE=1 SV=3)

HSP 1 Score: 234.958 bits (598), Expect = 3.427e-61
Identity = 113/136 (83.09%), Postives = 129/136 (94.85%), Query Frame = 3
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 416
            +EAFSLFDK  DG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG IDFPEFL +MARKM+DTD+EEE++EAF+VFDKD NG+ISAAELRHVMT+LGEKLT+EEVDEMIREAD+DGDGQ+NY+EFVK+M+ +
Sbjct:   16 KEAFSLFDKDGDGSITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGNIDFPEFLTMMARKMQDTDTEEEIREAFKVFDKDGNGYISAAELRHVMTSLGEKLTNEEVDEMIREADLDGDGQVNYDEFVKMMIVR 151          
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CALM_CHLRE (Calmodulin OS=Chlamydomonas reinhardtii PE=1 SV=2)

HSP 1 Score: 234.572 bits (597), Expect = 4.475e-61
Identity = 115/133 (86.47%), Postives = 127/133 (95.49%), Query Frame = 3
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 407
            +EAF+LFDK  DG ITTKELGTVMRSLGQNPTEAELQDMI+EVDADGNGTIDFPEFL LMARKMK+TD E+EL+EAF+VFDKD NGFISAAELRHVMTNLGEKL++EEVDEMIREADVDGDGQ+NYEEFV++M
Sbjct:   17 KEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMISEVDADGNGTIDFPEFLMLMARKMKETDHEDELREAFKVFDKDGNGFISAAELRHVMTNLGEKLSEEEVDEMIREADVDGDGQVNYEEFVRMM 149          
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CALM3_SOLTU (Putative calmodulin-3 (Fragment) OS=Solanum tuberosum GN=PCM3 PE=5 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.475e-61
Identity = 117/124 (94.35%), Postives = 121/124 (97.58%), Query Frame = 3
Query:   45 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 416
            GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK+KDTD EEELKEAFRVFDKD+NGFISAAEL HVMTNLGEKLTDEEVDE+IREADVD DGQINY+EFVKVMMAK
Sbjct:    1 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKIKDTDFEEELKEAFRVFDKDRNGFISAAELPHVMTNLGEKLTDEEVDEIIREADVDCDGQINYDEFVKVMMAK 124          
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CALL3_RAT (Calmodulin-like protein 3 OS=Rattus norvegicus GN=Calml3 PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.475e-61
Identity = 110/136 (80.88%), Postives = 127/136 (93.38%), Query Frame = 3
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 416
            +EAFSLFDK  DGCITT+ELGTVMRSLGQNPTEAELQDM+NE+D DGNGT+DFPEFL +M+RKMKDTDSEEE++EAFRVFDKD NGF+SAAELRHVMT LGEKL+DEEVDEMI+ AD DGDGQ+NYEEFV ++++K
Sbjct:   14 KEAFSLFDKDGDGCITTQELGTVMRSLGQNPTEAELQDMVNEIDKDGNGTVDFPEFLTMMSRKMKDTDSEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIQAADTDGDGQVNYEEFVHMLVSK 149          
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CALL3_HUMAN (Calmodulin-like protein 3 OS=Homo sapiens GN=CALML3 PE=1 SV=2)

HSP 1 Score: 234.572 bits (597), Expect = 4.475e-61
Identity = 110/136 (80.88%), Postives = 128/136 (94.12%), Query Frame = 3
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 416
            +EAFSLFDK  DGCITT+ELGTVMRSLGQNPTEAEL+DM++E+D DGNGT+DFPEFL +MARKMKDTD+EEE++EAFRVFDKD NGF+SAAELRHVMT LGEKL+DEEVDEMIR AD DGDGQ+NYEEFV+V+++K
Sbjct:   14 KEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRVLVSK 149          
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CML1_ORYSI (Calmodulin-like protein 1 OS=Oryza sativa subsp. indica GN=CML1 PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.302e-60
Identity = 117/136 (86.03%), Postives = 124/136 (91.18%), Query Frame = 3
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 416
            +EAFSLFDK  DG ITTKELGTVMRSLGQNPTEAELQDMI+EVDAD NG I+F EFL LMARK++D DSEEELKEAFRVFDKDQNGFISAAELRHVM N+GE+LTDEEV EMI EADVDGDGQINYEEFVK MMAK
Sbjct:   14 REAFSLFDKDGDGSITTKELGTVMRSLGQNPTEAELQDMISEVDADSNGNIEFKEFLGLMARKLRDKDSEEELKEAFRVFDKDQNGFISAAELRHVMANIGERLTDEEVGEMISEADVDGDGQINYEEFVKCMMAK 149          
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CALMS_CHICK (Calmodulin, striated muscle OS=Gallus gallus GN=CCM1 PE=3 SV=2)

HSP 1 Score: 232.646 bits (592), Expect = 1.701e-60
Identity = 112/136 (82.35%), Postives = 127/136 (93.38%), Query Frame = 3
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 416
            +EAFSLFD+  DGCITT ELGTVMRSLGQNPTEAELQDM+ EVDADG+GTIDFPEFL+LMARKM+D+DSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMI+EAD + DGQ+NYEEFV++M  K
Sbjct:   14 KEAFSLFDRDGDGCITTMELGTVMRSLGQNPTEAELQDMVGEVDADGSGTIDFPEFLSLMARKMRDSDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIKEADCNNDGQVNYEEFVRMMTEK 149          
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CALMF_NAEGR (Calmodulin, flagellar OS=Naegleria gruberi GN=CAM1 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.221e-60
Identity = 115/136 (84.56%), Postives = 123/136 (90.44%), Query Frame = 3
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 416
            +EAFSLFDK  DG ITT ELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDF EFL +MA+KMKDTD+EEE+KEAF+VFDKD NGFISA ELRHVM NLGEKLTDEEVDEMIREAD+DGD QINY EFVK+MM K
Sbjct:   20 KEAFSLFDKDGDGTITTSELGTVMRSLGQNPTEAELHDMINEVDADGNGTIDFTEFLTMMAKKMKDTDNEEEIKEAFKVFDKDGNGFISAQELRHVMCNLGEKLTDEEVDEMIREADIDGDNQINYTEFVKMMMQK 155          
The following BLAST results are available for this feature:
BLAST of CF832292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 457
Match NameE-valueIdentityDescription
CALM_PARTE2.009e-6185.29Calmodulin OS=Paramecium tetraurelia GN=CAM PE=1 S... [more]
CALM_PNECA3.427e-6185.29Calmodulin OS=Pneumocystis carinii PE=3 SV=1[more]
CALM_DICDI3.427e-6183.09Calmodulin OS=Dictyostelium discoideum GN=calA PE=... [more]
CALM_CHLRE4.475e-6186.47Calmodulin OS=Chlamydomonas reinhardtii PE=1 SV=2[more]
CALM3_SOLTU4.475e-6194.35Putative calmodulin-3 (Fragment) OS=Solanum tubero... [more]
CALL3_RAT4.475e-6180.88Calmodulin-like protein 3 OS=Rattus norvegicus GN=... [more]
CALL3_HUMAN4.475e-6180.88Calmodulin-like protein 3 OS=Homo sapiens GN=CALML... [more]
CML1_ORYSI1.302e-6086.03Calmodulin-like protein 1 OS=Oryza sativa subsp. i... [more]
CALMS_CHICK1.701e-6082.35Calmodulin, striated muscle OS=Gallus gallus GN=CC... [more]
CALMF_NAEGR2.221e-6084.56Calmodulin, flagellar OS=Naegleria gruberi GN=CAM1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01K03_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01K03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832292 ID=CF832292; Name=CF832292; organism=Citrus sinensis; type=EST; length=751bp
TCTGAGTTCAAGAGGCCTTCAGCTTGTTTGACAAGCATGTCGACGGTTGC
ATTACCACCAAGGAGCTTGGCACTGTTATGAGGTCACTGGGTCAGAACCC
CACTGAGGCTGAGCTCCAGGACATGATCAATGAAGTGGATGCTGATGGTA
ATGGAACTATTGATTTTCCTGAATTCCTAAACCTCATGGCCAGGAAGATG
AAGGATACCGACTCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCGA
CAAGGATCAGAATGGTTTCATCTCAGCTGCTGAGCTGCGCCATGTGATGA
CAAACCTAGGAGAGAAACTTACTGATGAAGAAGTTGATGAGATGATAAGG
GAAGCTGATGTTGATGGTGATGGCCAGATAAATTATGAGGAATTTGTCAA
GGTTATGATGGCCAAGTAATGACCCCAACCCACCAATACTTATAAAATGG
GTTGACTAAATTATAAAGGGATTCCTAGTTTTCTCTTTTACAATTTTTAA
TTTGATAGTCATGAGGGTCAGGCTAAAGGAAGCAATGGTCTTTTAATGGT
GATGGGCCTGATGGTGTAGGAAGAATGTTGTCTCCCTCGTCAATATGTCT
TGTGACTCGCAAAACTTTTCGGTTTTTATTATTTTAGTTGTTCTGCTGTT
CTATGAATGTTGTTGTCTGTTTAATGTGTTTCATTAATTTCTGCCCTTGC
GATGTTTATTTTTCTTTTGGTCGAAATATGTATCCTATTTTATGTATCAA
A
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