CF832292

Overview
NameCF832292
Unique NameCF832292
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CML8_ARATH (Calmodulin-like protein 8 OS=Arabidopsis thaliana GN=CML8 PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.435e-53
Identity = 97/134 (72.39%), Postives = 121/134 (90.30%), Query Frame = 3
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 410
            +EAF LFDK  DGCIT +EL TV+RSL QNPTE EL D+I E+D+D NGTI+F EFLNLMA+K++++D+EEELKEAF+VFDKDQNG+ISA+EL HVM NLGEKLTDEEV++MI+EAD+DGDGQ+NY+EFVK+M+
Sbjct:   15 KEAFCLFDKDGDGCITVEELATVIRSLDQNPTEQELHDIITEIDSDSNGTIEFAEFLNLMAKKLQESDAEEELKEAFKVFDKDQNGYISASELSHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYDEFVKMMI 148          
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CALM_SCHPO (Calmodulin OS=Schizosaccharomyces pombe GN=cam1 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 8.460e-52
Identity = 99/136 (72.79%), Postives = 118/136 (86.76%), Query Frame = 3
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 416
            +EAFSLFD+  DG IT+ ELG VMRSLGQ+PT AELQDMINEVDADGNGTIDF EFL +MARKMKDTD+EEE++EAF+VFDKD NG+I+  EL HV+T+LGE+L+ EEV +MIREAD DGDG INYEEF +V+ +K
Sbjct:   15 REAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLTMMARKMKDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEFSRVISSK 150          
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CML2_ORYSJ (Putative calmodulin-like protein 2 OS=Oryza sativa subsp. japonica GN=CML2 PE=3 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 3.554e-50
Identity = 94/136 (69.12%), Postives = 119/136 (87.50%), Query Frame = 3
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 416
            +EAF+LFDK  DG IT+KELGTVM SLGQ+PTEAEL+ M+ EVDADG+G+I+F EFL L+ARK++DT +E++++EAFRVFDKDQNGFI+  ELRHVM NLG+ L+D+E+ +M+ EAD DGDGQINY EF+KVMMAK
Sbjct:   13 REAFNLFDKDGDGTITSKELGTVMGSLGQSPTEAELKKMVEEVDADGSGSIEFEEFLGLLARKLRDTGAEDDIREAFRVFDKDQNGFITPDELRHVMANLGDPLSDDELADMLHEADSDGDGQINYNEFLKVMMAK 148          
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CML4_ORYSJ (Calmodulin-like protein 4 OS=Oryza sativa subsp. japonica GN=CML4 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.642e-50
Identity = 97/133 (72.93%), Postives = 110/133 (82.71%), Query Frame = 3
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 407
            QEAF LFDK+ DGCIT +EL  V RSLG  PT+ EL DM+ EVD DGNG IDF EFL+L+ARKMKD D +EELKEAF V DKDQNGFIS  ELR VMTNLGEK+TDEEV++MIREAD DGDGQ+NY+EFV +M
Sbjct:   13 QEAFLLFDKNGDGCITLEELAAVTRSLGLEPTDQELNDMMREVDTDGNGIIDFQEFLSLIARKMKDGDGDEELKEAFEVLDKDQNGFISPTELRTVMTNLGEKMTDEEVEQMIREADTDGDGQVNYDEFVIMM 145          
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CML3_ORYSJ (Calmodulin-like protein 3 OS=Oryza sativa subsp. japonica GN=CML3 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.930e-49
Identity = 92/136 (67.65%), Postives = 118/136 (86.76%), Query Frame = 3
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 416
            +EAF+LFDK  DG IT+KELGTVM SLGQ+PTEAEL+ M+ EVDADG+G+I+F EFL L+ARK++DT +E+++++AFRVFDKDQNGFI+  ELRHVM NL + L+D+E+ +M+ EAD DGDGQINY EF+KVMMAK
Sbjct:   13 REAFNLFDKDGDGTITSKELGTVMGSLGQSPTEAELKKMVEEVDADGSGSIEFEEFLGLLARKLRDTGAEDDIRDAFRVFDKDQNGFITPDELRHVMANLSDPLSDDELADMLHEADSDGDGQINYNEFLKVMMAK 148          
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CALM_CANAL (Calmodulin OS=Candida albicans GN=CMD1 PE=3 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 1.950e-48
Identity = 92/136 (67.65%), Postives = 118/136 (86.76%), Query Frame = 3
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 416
            +EAFSLFDK  DG ITTKELGTVMRSLGQNP+E+EL DMINEVD + +G+IDFPEFL +MARKMKDTDSE E+ EAF+VFD++ +G ISAAELRH++T++GEKL+D +VD+MI+EAD + DG+I+ +EF  ++ AK
Sbjct:   14 KEAFSLFDKDSDGKITTKELGTVMRSLGQNPSESELTDMINEVDVNSDGSIDFPEFLTMMARKMKDTDSEAEIAEAFKVFDRNGDGKISAAELRHLLTSIGEKLSDADVDQMIKEADTNNDGEIDIQEFTSLLAAK 149          
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CML5_ORYSJ (Calmodulin-like protein 5 OS=Oryza sativa subsp. japonica GN=CML5 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.183e-45
Identity = 92/146 (63.01%), Postives = 113/146 (77.40%), Query Frame = 3
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMK------------DTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 410
            +E F+ FDK  DGCIT +EL TV+RSLGQ PT  EL +MI +VD DGNGTI+F EFL LMARK                 ++EEL+EAF+VFDKDQ+G ISAAELRHVM +LGEKLTDEEV++MIREAD+DGDGQ+N++EFV++MM
Sbjct:   17 RETFAFFDKDGDGCITLEELDTVVRSLGQTPTREELAEMIRDVDVDGNGTIEFAEFLALMARKASRGGENGGGGDDSGDAADEELREAFKVFDKDQDGLISAAELRHVMISLGEKLTDEEVEQMIREADLDGDGQVNFDEFVRMMM 162          
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CALL_DROME (Calmodulin-related protein 97A OS=Drosophila melanogaster GN=And PE=1 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 4.496e-45
Identity = 86/136 (63.24%), Postives = 112/136 (82.35%), Query Frame = 3
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 416
            ++AF  FDK   G I T+ELGT+MR+LGQNPTEAELQD+I E + + NG ++F EF  +MA++M++TD+EEE++EAF++FD+D +GFIS AELR VM NLGEK+TDEE+DEMIREAD DGDG INYEEFV ++  K
Sbjct:   13 KDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMISQK 148          
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CABO_LOLPE (Squidulin OS=Loligo pealeii PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.914e-44
Identity = 86/138 (62.32%), Postives = 112/138 (81.16%), Query Frame = 3
Query:    6 VQEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG-EKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 416
            +++AF +FD   DG IT+KEL +VM+SLG+ P++AEL++MI EVD DGNGTI++ EF+ +MA++M  TD E+E++EAFRVFDKD NG I+AAELR VM N   EKLT EE+ EMIREAD+DGDG +NYEEFVK+M  K
Sbjct:   12 IKDAFDMFDIDGDGQITSKELRSVMKSLGRTPSDAELEEMIREVDTDGNGTIEYAEFVEMMAKQMGPTDPEKEMREAFRVFDKDGNGLITAAELRQVMANFSDEKLTSEEISEMIREADIDGDGMVNYEEFVKMMTPK 149          

HSP 2 Score: 69.3218 bits (168), Expect = 2.490e-11
Identity = 36/65 (55.38%), Postives = 48/65 (73.85%), Query Frame = 3
Query:  222 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 416
            E+K+AF +FD D +G I++ ELR VM +LG   +D E++EMIRE D DG+G I Y EFV+ MMAK
Sbjct:   11 EIKDAFDMFDIDGDGQITSKELRSVMKSLGRTPSDAELEEMIREVDTDGNGTIEYAEFVE-MMAK 74          
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CALL_CAEEL (Calmodulin-like protein OS=Caenorhabditis elegans GN=cal-1 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.467e-43
Identity = 86/133 (64.66%), Postives = 108/133 (81.20%), Query Frame = 3
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 407
            +EAF +FDK  +G I+TKELG  MRSLGQNPTE E+ +MINEVD DGNG I+FPEF  +M R MK+TDS E ++EAFRVFDKD NG I+A E R+ M ++G + ++EEVDEMI+E DVDGDG+I+YEEFVK+M
Sbjct:   27 REAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEVDIDGNGQIEFPEFCVMMKRMMKETDS-EMIREAFRVFDKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMIKEVDVDGDGEIDYEEFVKMM 158          

HSP 2 Score: 68.1662 bits (165), Expect = 5.547e-11
Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 3
Query:  219 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 407
            +E +EAF +FDKD NG IS  EL   M +LG+  T++E+ EMI E D+DG+GQI + EF  +M
Sbjct:   24 DEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEVDIDGNGQIEFPEFCVMM 86          
The following BLAST results are available for this feature:
BLAST of CF832292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 457
Match NameE-valueIdentityDescription
CML8_ARATH3.435e-5372.39Calmodulin-like protein 8 OS=Arabidopsis thaliana ... [more]
CALM_SCHPO8.460e-5272.79Calmodulin OS=Schizosaccharomyces pombe GN=cam1 PE... [more]
CML2_ORYSJ3.554e-5069.12Putative calmodulin-like protein 2 OS=Oryza sativa... [more]
CML4_ORYSJ4.642e-5072.93Calmodulin-like protein 4 OS=Oryza sativa subsp. j... [more]
CML3_ORYSJ3.930e-4967.65Calmodulin-like protein 3 OS=Oryza sativa subsp. j... [more]
CALM_CANAL1.950e-4867.65Calmodulin OS=Candida albicans GN=CMD1 PE=3 SV=2[more]
CML5_ORYSJ1.183e-4563.01Calmodulin-like protein 5 OS=Oryza sativa subsp. j... [more]
CALL_DROME4.496e-4563.24Calmodulin-related protein 97A OS=Drosophila melan... [more]
CABO_LOLPE2.914e-4462.32Squidulin OS=Loligo pealeii PE=1 SV=1[more]
CALL_CAEEL2.467e-4364.66Calmodulin-like protein OS=Caenorhabditis elegans ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01K03_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01K03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832292 ID=CF832292; Name=CF832292; organism=Citrus sinensis; type=EST; length=751bp
TCTGAGTTCAAGAGGCCTTCAGCTTGTTTGACAAGCATGTCGACGGTTGC
ATTACCACCAAGGAGCTTGGCACTGTTATGAGGTCACTGGGTCAGAACCC
CACTGAGGCTGAGCTCCAGGACATGATCAATGAAGTGGATGCTGATGGTA
ATGGAACTATTGATTTTCCTGAATTCCTAAACCTCATGGCCAGGAAGATG
AAGGATACCGACTCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCGA
CAAGGATCAGAATGGTTTCATCTCAGCTGCTGAGCTGCGCCATGTGATGA
CAAACCTAGGAGAGAAACTTACTGATGAAGAAGTTGATGAGATGATAAGG
GAAGCTGATGTTGATGGTGATGGCCAGATAAATTATGAGGAATTTGTCAA
GGTTATGATGGCCAAGTAATGACCCCAACCCACCAATACTTATAAAATGG
GTTGACTAAATTATAAAGGGATTCCTAGTTTTCTCTTTTACAATTTTTAA
TTTGATAGTCATGAGGGTCAGGCTAAAGGAAGCAATGGTCTTTTAATGGT
GATGGGCCTGATGGTGTAGGAAGAATGTTGTCTCCCTCGTCAATATGTCT
TGTGACTCGCAAAACTTTTCGGTTTTTATTATTTTAGTTGTTCTGCTGTT
CTATGAATGTTGTTGTCTGTTTAATGTGTTTCATTAATTTCTGCCCTTGC
GATGTTTATTTTTCTTTTGGTCGAAATATGTATCCTATTTTATGTATCAA
A
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