CF832292
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CALM_STRPU (Calmodulin (Fragment) OS=Strongylocentrotus purpuratus PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.772e-33 Identity = 68/80 (85.00%), Postives = 76/80 (95.00%), Query Frame = 3 Query: 177 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 416 L +MARKMK+TDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K Sbjct: 1 LTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVAMMTSK 80
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: TNNC2_MELGA (Troponin C, skeletal muscle OS=Meleagris gallopavo GN=TNNC2 PE=1 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 2.315e-33 Identity = 69/134 (51.49%), Postives = 99/134 (73.88%), Query Frame = 3 Query: 15 AFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT---DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 407 AF +FD G I+TKELGTVMR LGQNPT+ EL +I EVD DG+GTIDF EFL +M R+MK+ SEEEL FR+FDK+ +GFI EL ++ GE +T+EE++++++++D + DG+I+++EF+K+M Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEEIEDLMKDSDKNNDGRIDFDEFLKMM 158
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: TNNC2_CHICK (Troponin C, skeletal muscle OS=Gallus gallus GN=TNNC2 PE=1 SV=3) HSP 1 Score: 141.354 bits (355), Expect = 5.156e-33 Identity = 68/134 (50.75%), Postives = 99/134 (73.88%), Query Frame = 3 Query: 15 AFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT---DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 407 AF +FD G I+TKELGTVMR LGQNPT+ EL +I EVD DG+GTIDF EFL +M R+MK+ SEEEL FR+FDK+ +GFI EL ++ GE +T+E+++++++++D + DG+I+++EF+K+M Sbjct: 26 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 159
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: TNNC1_PIG (Troponin C, slow skeletal and cardiac muscles OS=Sus scrofa GN=TNNC1 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.156e-33 Identity = 66/125 (52.80%), Postives = 96/125 (76.80%), Query Frame = 3 Query: 42 DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 407 DGCI+TKELG VMR LGQNPT ELQ+MI+EVD DG+GT+DF EFL +M R MKD SEEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+EF++ M Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: TNNC1_MOUSE (Troponin C, slow skeletal and cardiac muscles OS=Mus musculus GN=Tnnc1 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.156e-33 Identity = 66/125 (52.80%), Postives = 96/125 (76.80%), Query Frame = 3 Query: 42 DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 407 DGCI+TKELG VMR LGQNPT ELQ+MI+EVD DG+GT+DF EFL +M R MKD SEEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+EF++ M Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKMMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: TNNC1_BOVIN (Troponin C, slow skeletal and cardiac muscles OS=Bos taurus GN=TNNC1 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.156e-33 Identity = 66/125 (52.80%), Postives = 96/125 (76.80%), Query Frame = 3 Query: 42 DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 407 DGCI+TKELG VMR LGQNPT ELQ+MI+EVD DG+GT+DF EFL +M R MKD SEEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+EF++ M Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: TNNC1_RABIT (Troponin C, slow skeletal and cardiac muscles OS=Oryctolagus cuniculus GN=TNNC1 PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.734e-33 Identity = 66/125 (52.80%), Postives = 96/125 (76.80%), Query Frame = 3 Query: 42 DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 407 DGCI+TKELG VMR LGQNPT ELQ+MI+EVD DG+GT+DF EFL +M R MKD SEEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+EF++ M Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: TNNC1_HUMAN (Troponin C, slow skeletal and cardiac muscles OS=Homo sapiens GN=TNNC1 PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.734e-33 Identity = 66/125 (52.80%), Postives = 96/125 (76.80%), Query Frame = 3 Query: 42 DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 407 DGCI+TKELG VMR LGQNPT ELQ+MI+EVD DG+GT+DF EFL +M R MKD SEEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+EF++ M Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: TNNC1_CHICK (Troponin C, slow skeletal and cardiac muscles OS=Gallus gallus GN=TNNC1 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.149e-32 Identity = 65/125 (52.00%), Postives = 96/125 (76.80%), Query Frame = 3 Query: 42 DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 407 DGCI+TKELG VMR LGQNPT ELQ+MI+EVD DG+GT+DF EFL +M R MKD +EEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+EF++ M Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: TNNC2_RABIT (Troponin C, skeletal muscle OS=Oryctolagus cuniculus GN=TNNC2 PE=1 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.959e-32 Identity = 68/134 (50.75%), Postives = 96/134 (71.64%), Query Frame = 3 Query: 15 AFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT---DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 407 AF +FD G I+ KELGTVMR LGQ PT+ EL +I EVD DG+GTIDF EFL +M R+MK+ SEEEL E FR+FD++ +G+I A EL + GE +TDEE++ ++++ D + DG+I+++EF+K+M Sbjct: 23 AFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMM 156 The following BLAST results are available for this feature:
BLAST of CF832292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 457
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832292 ID=CF832292; Name=CF832292; organism=Citrus sinensis; type=EST; length=751bpback to top |