CF832292

Overview
NameCF832292
Unique NameCF832292
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2673 contig Csv1_Contig2673:649..1399. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CALM_ONCSP (Calmodulin OS=Oncorhynchus sp. GN=calm PE=1 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 8.714e-65
Identity = 121/136 (88.97%), Postives = 130/136 (95.59%), Query Frame = 3 
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 416
            +EAFSLFDK  DG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CALM_MOUSE (Calmodulin OS=Mus musculus GN=Calm1 PE=1 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 8.714e-65
Identity = 121/136 (88.97%), Postives = 130/136 (95.59%), Query Frame = 3 
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 416
            +EAFSLFDK  DG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CALM_HUMAN (Calmodulin OS=Homo sapiens GN=CALM1 PE=1 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 8.714e-65
Identity = 121/136 (88.97%), Postives = 130/136 (95.59%), Query Frame = 3 
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 416
            +EAFSLFDK  DG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CALM_GECJA (Calmodulin OS=Gecko japonicus GN=GekBS194P PE=2 SV=3)

HSP 1 Score: 246.899 bits (629), Expect = 8.714e-65
Identity = 121/136 (88.97%), Postives = 130/136 (95.59%), Query Frame = 3 
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 416
            +EAFSLFDK  DG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CALM_DANRE (Calmodulin OS=Danio rerio GN=calm1a PE=2 SV=3)

HSP 1 Score: 246.899 bits (629), Expect = 8.714e-65
Identity = 121/136 (88.97%), Postives = 130/136 (95.59%), Query Frame = 3 
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 416
            +EAFSLFDK  DG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CALM_CTEID (Calmodulin OS=Ctenopharyngodon idella GN=calm PE=2 SV=3)

HSP 1 Score: 246.899 bits (629), Expect = 8.714e-65
Identity = 121/136 (88.97%), Postives = 130/136 (95.59%), Query Frame = 3 
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 416
            +EAFSLFDK  DG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CALM_CHICK (Calmodulin OS=Gallus gallus GN=CALM PE=1 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 8.714e-65
Identity = 121/136 (88.97%), Postives = 130/136 (95.59%), Query Frame = 3 
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 416
            +EAFSLFDK  DG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CALM_BOVIN (Calmodulin OS=Bos taurus GN=CALM PE=1 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 8.714e-65
Identity = 121/136 (88.97%), Postives = 130/136 (95.59%), Query Frame = 3 
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 416
            +EAFSLFDK  DG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CALM_ANAPL (Calmodulin OS=Anas platyrhynchos GN=CALM PE=2 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 8.714e-65
Identity = 121/136 (88.97%), Postives = 130/136 (95.59%), Query Frame = 3 
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 416
            +EAFSLFDK  DG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CF832292 vs. ExPASy Swiss-Prot
Match: CALM_TRYCR (Calmodulin OS=Trypanosoma cruzi GN=CALA2 PE=3 SV=2)

HSP 1 Score: 246.514 bits (628), Expect = 1.138e-64
Identity = 123/136 (90.44%), Postives = 130/136 (95.59%), Query Frame = 3 
Query:    9 QEAFSLFDKHVDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 416
            +EAFSLFDK  DG ITTKELGTVMRSLGQNPTEAELQDMINEVD DG+GTIDFPEFL LMARKM+D+DSEEE+KEAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MM+K
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMARKMQDSDSEEEIKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMSK 149
The following BLAST results are available for this feature:
BLAST of CF832292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 457
Match NameE-valueIdentityDescription
CALM_ONCSP8.714e-6588.97Calmodulin OS=Oncorhynchus sp. GN=calm PE=1 SV=2[more]
CALM_MOUSE8.714e-6588.97Calmodulin OS=Mus musculus GN=Calm1 PE=1 SV=2[more]
CALM_HUMAN8.714e-6588.97Calmodulin OS=Homo sapiens GN=CALM1 PE=1 SV=2[more]
CALM_GECJA8.714e-6588.97Calmodulin OS=Gecko japonicus GN=GekBS194P PE=2 SV... [more]
CALM_DANRE8.714e-6588.97Calmodulin OS=Danio rerio GN=calm1a PE=2 SV=3[more]
CALM_CTEID8.714e-6588.97Calmodulin OS=Ctenopharyngodon idella GN=calm PE=2... [more]
CALM_CHICK8.714e-6588.97Calmodulin OS=Gallus gallus GN=CALM PE=1 SV=2[more]
CALM_BOVIN8.714e-6588.97Calmodulin OS=Bos taurus GN=CALM PE=1 SV=2[more]
CALM_ANAPL8.714e-6588.97Calmodulin OS=Anas platyrhynchos GN=CALM PE=2 SV=2[more]
CALM_TRYCR1.138e-6490.44Calmodulin OS=Trypanosoma cruzi GN=CALA2 PE=3 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01K03_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01K03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832292 ID=CF832292; Name=CF832292; organism=Citrus sinensis; type=EST; length=751bp
TCTGAGTTCAAGAGGCCTTCAGCTTGTTTGACAAGCATGTCGACGGTTGC
ATTACCACCAAGGAGCTTGGCACTGTTATGAGGTCACTGGGTCAGAACCC
CACTGAGGCTGAGCTCCAGGACATGATCAATGAAGTGGATGCTGATGGTA
ATGGAACTATTGATTTTCCTGAATTCCTAAACCTCATGGCCAGGAAGATG
AAGGATACCGACTCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCGA
CAAGGATCAGAATGGTTTCATCTCAGCTGCTGAGCTGCGCCATGTGATGA
CAAACCTAGGAGAGAAACTTACTGATGAAGAAGTTGATGAGATGATAAGG
GAAGCTGATGTTGATGGTGATGGCCAGATAAATTATGAGGAATTTGTCAA
GGTTATGATGGCCAAGTAATGACCCCAACCCACCAATACTTATAAAATGG
GTTGACTAAATTATAAAGGGATTCCTAGTTTTCTCTTTTACAATTTTTAA
TTTGATAGTCATGAGGGTCAGGCTAAAGGAAGCAATGGTCTTTTAATGGT
GATGGGCCTGATGGTGTAGGAAGAATGTTGTCTCCCTCGTCAATATGTCT
TGTGACTCGCAAAACTTTTCGGTTTTTATTATTTTAGTTGTTCTGCTGTT
CTATGAATGTTGTTGTCTGTTTAATGTGTTTCATTAATTTCTGCCCTTGC
GATGTTTATTTTTCTTTTGGTCGAAATATGTATCCTATTTTATGTATCAA
A
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