CF832293
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CML10_ARATH (Calmodulin-like protein 10 OS=Arabidopsis thaliana GN=CML10 PE=1 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.033e-37 Identity = 81/124 (65.32%), Postives = 99/124 (79.84%), Query Frame = -2 Query: 337 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 708 G ITT+E G VMRSLG N T+AELQ+ IN+ D DG+GTI+F EFL MA KDT SE++LK+ FR+FD D+NGFISAAE+R+V T L K TDEE+DE+I+ ADVDGDGQINY EF ++MMAK Sbjct: 26 GHITTEEFGAVMRSLGLNLTQAELQEEINDSDLDGDGTINFTEFLCAMA---KDTYSEKDLKKDFRLFDIDKNGFISAAEMRYVRTILRWKQTDEEIDEIIKAADVDGDGQINYREFARLMMAK 146
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CALM_YEAST (Calmodulin OS=Saccharomyces cerevisiae GN=CMD1 PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.732e-35 Identity = 71/121 (58.68%), Postives = 98/121 (80.99%), Query Frame = -2 Query: 346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708 G I++ EL TVMRSLG +P+EAE+ D++NE+D DGN I+F EFL LM+R++K DSE+EL EAF+VFDK+ +G ISAAEL+HV+T++GEKLTD EVD+M+RE DG G+IN ++F ++ Sbjct: 26 GSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALL 145
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CALM_KLULA (Calmodulin OS=Kluyveromyces lactis GN=CMD1 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.955e-35 Identity = 72/121 (59.50%), Postives = 97/121 (80.17%), Query Frame = -2 Query: 346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708 G I+ EL TVMRSLG +P+EAE+ D++NE+D DGN I+F EFL LM+R++K DSE+EL EAF+VFDK+ +G ISAAEL+HV+T++GEKLTD EVDEM+RE DG G+IN ++F ++ Sbjct: 26 GSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALL 145
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CML6_ORYSJ (Putative calmodulin-like protein 6 OS=Oryza sativa subsp. japonica GN=CML6 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.502e-34 Identity = 69/126 (54.76%), Postives = 97/126 (76.98%), Query Frame = -2 Query: 340 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDS---EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 708 GCI+ +EL TV+ LG P++ +LQDMI VD DGNGTI+F EFL +M +K+ + D EEEL++AFR+FDKD NGFIS EL VM +LGE++T++E+D+M++ AD + DGQ++YEEF +VMM+ Sbjct: 26 GCISREELATVLTRLGMAPSQEDLQDMIVAVDEDGNGTIEFDEFLAIMKKKLYENDKGDDEEELRKAFRIFDKDDNGFISRNELSMVMASLGEEMTEDEIDDMMKAADSNNDGQVDYEEFKRVMMS 151
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CALM_STRPU (Calmodulin (Fragment) OS=Strongylocentrotus purpuratus PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.621e-33 Identity = 68/80 (85.00%), Postives = 76/80 (95.00%), Query Frame = -2 Query: 337 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 576 L +MARKMK+TDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K Sbjct: 1 LTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVAMMTSK 80
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: TNNC1_PIG (Troponin C, slow skeletal and cardiac muscles OS=Sus scrofa GN=TNNC1 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.341e-32 Identity = 65/124 (52.42%), Postives = 95/124 (76.61%), Query Frame = -2 Query: 346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708 GCI+TKELG VMR LGQNPT ELQ+MI+EVD DG+GT+DF EFL +M R MKD SEEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+EF++ M Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: TNNC1_MOUSE (Troponin C, slow skeletal and cardiac muscles OS=Mus musculus GN=Tnnc1 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.341e-32 Identity = 65/124 (52.42%), Postives = 95/124 (76.61%), Query Frame = -2 Query: 346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708 GCI+TKELG VMR LGQNPT ELQ+MI+EVD DG+GT+DF EFL +M R MKD SEEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+EF++ M Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKMMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: TNNC1_BOVIN (Troponin C, slow skeletal and cardiac muscles OS=Bos taurus GN=TNNC1 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.341e-32 Identity = 65/124 (52.42%), Postives = 95/124 (76.61%), Query Frame = -2 Query: 346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708 GCI+TKELG VMR LGQNPT ELQ+MI+EVD DG+GT+DF EFL +M R MKD SEEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+EF++ M Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: TNNC2_RANES (Troponin C, skeletal muscle OS=Rana esculenta PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.058e-32 Identity = 66/124 (53.23%), Postives = 95/124 (76.61%), Query Frame = -2 Query: 346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT---DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708 G I+TKELGTVMR LGQ PT+ EL +I EVD DG+GTIDF EFL +M R+MK+ SEEEL E FR+FDK+ +G+I + EL ++ + GE +TDEE++E++++ D + DG+I+++EF+K+M Sbjct: 35 GDISTKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAQGKSEEELAECFRIFDKNADGYIDSEELGEILRSSGESITDEEIEELMKDGDKNNDGKIDFDEFLKMM 158
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: TNNC1_RABIT (Troponin C, slow skeletal and cardiac muscles OS=Oryctolagus cuniculus GN=TNNC1 PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.058e-32 Identity = 65/124 (52.42%), Postives = 95/124 (76.61%), Query Frame = -2 Query: 346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708 GCI+TKELG VMR LGQNPT ELQ+MI+EVD DG+GT+DF EFL +M R MKD SEEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+EF++ M Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157 The following BLAST results are available for this feature:
BLAST of CF832293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 411
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832293 ID=CF832293; Name=CF832293; organism=Citrus sinensis; type=EST; length=709bpback to top |