CF832293
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CATR_TETST (Caltractin (Fragment) OS=Tetraselmis striata PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.862e-30 Identity = 64/121 (52.89%), Postives = 84/121 (69.42%), Query Frame = -2 Query: 346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708 G I KEL MR+LG P + E++ MI ++D DG+GTIDF EFL +M KM + DS EE+ +AFR+FD D+ G IS L+ V LGE +TDEE+ EMI EAD DGDG++N EEF ++M Sbjct: 22 GTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEVNEEEFFRIM 142
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CATR_SCHDU (Caltractin OS=Scherffelia dubia PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.862e-30 Identity = 64/121 (52.89%), Postives = 84/121 (69.42%), Query Frame = -2 Query: 346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708 G I KEL MR+LG P + E++ MI ++D DG+GTIDF EFL +M KM + DS EE+ +AFR+FD D+ G IS L+ V LGE +TDEE+ EMI EAD DGDG++N EEF ++M Sbjct: 42 GTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEVNEEEFFRIM 162
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CALML_DICDI (Calmodulin-like protein OS=Dictyostelium discoideum GN=calB PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.738e-30 Identity = 64/121 (52.89%), Postives = 93/121 (76.86%), Query Frame = -2 Query: 346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708 G IT +ELG VMRS+G NPT+ EL+D+ E+D DG+G +DF +F +LM RKMK +DSE ++K+AF+VFDK NG+ + +L+H +T++GEKLT EE D M+++A DGQI+ +EFV+V+ Sbjct: 24 GKITIQELGIVMRSVGSNPTQQELKDIAKEID-DGSGLVDFSKFSSLMTRKMKYSDSEADIKQAFKVFDKKGNGYANIQDLKHTLTSIGEKLTKEEFDNMLKDAKT-VDGQIHVDEFVRVI 142
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: TNNC2_MOUSE (Troponin C, skeletal muscle OS=Mus musculus GN=Tnnc2 PE=1 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 6.376e-30 Identity = 63/124 (50.81%), Postives = 91/124 (73.39%), Query Frame = -2 Query: 346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT---DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708 G I+ KELGTVMR LGQ PT+ EL +I EVD DG+GTIDF EFL +M R+MK+ SEEEL E FR+FD++ +G+I A EL + GE +T+EE++ ++++ D + DG+I+++EF+K+M Sbjct: 33 GDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTEEEIESLMKDGDKNNDGRIDFDEFLKMM 156
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: TNNC2_HUMAN (Troponin C, skeletal muscle OS=Homo sapiens GN=TNNC2 PE=1 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 8.327e-30 Identity = 63/124 (50.81%), Postives = 90/124 (72.58%), Query Frame = -2 Query: 346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT---DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708 G I+ KELGTVMR LGQ PT+ EL +I EVD DG+GTIDF EFL +M R+MK+ SEEEL E FR+FD++ +G+I EL + GE +TDEE++ ++++ D + DG+I+++EF+K+M Sbjct: 33 GDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDPEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMM 156
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CETN1_HUMAN (Centrin-1 OS=Homo sapiens GN=CETN1 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.398e-29 Identity = 62/121 (51.24%), Postives = 85/121 (70.25%), Query Frame = -2 Query: 346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708 G I KEL MR+LG P + E++ MI+EVD +G G I F +FL +M +KM + D++EE+ +AFR+FD D+ G IS L+ V LGE LTDEE+ EMI EAD DGDG++N EEF+++M Sbjct: 46 GTIDAKELKVAMRALGFEPRKEEMKKMISEVDREGTGKISFNDFLAVMTQKMSEKDTKEEILKAFRLFDDDETGKISFKNLKRVANELGENLTDEELQEMIDEADRDGDGEVNEEEFLRIM 166
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CATR_CHLRE (Caltractin OS=Chlamydomonas reinhardtii PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.202e-28 Identity = 61/121 (50.41%), Postives = 85/121 (70.25%), Query Frame = -2 Query: 346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708 G I KEL MR+LG P + E++ MI+E+D DG+GTIDF EFL +M KM + DS EE+ +AFR+FD D +G I+ +LR V LGE LT+EE+ EMI EAD + D +I+ +EF+++M Sbjct: 43 GTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIM 163
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CETN1_MOUSE (Centrin-1 OS=Mus musculus GN=Cetn1 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.570e-28 Identity = 62/121 (51.24%), Postives = 84/121 (69.42%), Query Frame = -2 Query: 346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708 G I KEL MR+LG P + E++ MI+EVD + G I F +FL +M +KM + D++EE+ +AFR+FD D+ G IS L+ V LGE LTDEE+ EMI EAD DGDG++N EEF+K+M Sbjct: 46 GTIDVKELKVAMRALGFEPRKEEMKKMISEVDKEATGKISFNDFLAVMTQKMAEKDTKEEILKAFRLFDDDETGKISFKNLKRVANELGESLTDEELQEMIDEADRDGDGEVNEEEFLKIM 166
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CETN2_MOUSE (Centrin-2 OS=Mus musculus GN=Cetn2 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.569e-28 Identity = 58/121 (47.93%), Postives = 86/121 (71.07%), Query Frame = -2 Query: 346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708 G I KEL MR+LG P + E++ MI+E+D +G G ++F +FL +M +KM + D++EE+ +AF++FD D+ G IS L+ V LGE LTDEE+ EMI EAD DGDG++N +EF+++M Sbjct: 46 GTIDIKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFSDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVNEQEFLRIM 166
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CATR_DUNSA (Caltractin OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.968e-28 Identity = 61/121 (50.41%), Postives = 82/121 (67.77%), Query Frame = -2 Query: 346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708 G I KEL MR+LG P + E++ MI ++D G+GTIDF EFL +M KM + DS EE+ +AF++FD D GFI+ L+ V LGE LTDEE+ EM EAD +GDGQI+ +EF ++M Sbjct: 43 GTIDAKELKVAMRALGFEPKKEEIKKMIADIDKAGSGTIDFEEFLQMMTSKMGERDSREEIIKAFKLFDDDNTGFITLKNLKRVAKELGENLTDEELQEMTDEADRNGDGQIDEDEFYRIM 163 The following BLAST results are available for this feature:
BLAST of CF832293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 411
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832293 ID=CF832293; Name=CF832293; organism=Citrus sinensis; type=EST; length=709bpback to top |