CF832293
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CML18_ARATH (Probable calcium-binding protein CML18 OS=Arabidopsis thaliana GN=CML18 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.228e-24 Identity = 55/122 (45.08%), Postives = 85/122 (69.67%), Query Frame = -2 Query: 346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKM-KDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708 G +T ELG+++RSLG P++ +L +I + D + NG ++F EF+ L+ + K ++++LK FR+FD+D NG+I+AAEL H M LG LT EE+ MI+EAD DGDG I+++EFV+ + Sbjct: 34 GSLTELELGSLLRSLGLKPSQDQLDTLIQKADRNNNGLVEFSEFVALVEPDLVKCPYTDDQLKAIFRMFDRDGNGYITAAELAHSMAKLGHALTAEELTGMIKEADRDGDGCIDFQEFVQAI 155
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: TNNC2_CAEEL (Troponin C, isoform 2 OS=Caenorhabditis elegans GN=tnc-2 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.828e-24 Identity = 51/125 (40.80%), Postives = 85/125 (68.00%), Query Frame = -2 Query: 346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL----NLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708 G I ++G ++R++GQ E +L+ +I E DADG+G I+F EF N + D EEEL+EAFR++DK+ NG+I+ ++LR ++ L + +++EE+DEMI E D DG G ++++EF+++M Sbjct: 33 GYIRATQVGQILRTMGQAFEERDLKQLIKEFDADGSGEIEFEEFAAMVANFVVNNENDEGLEEELREAFRLYDKEGNGYINVSDLRDILRALDDNVSEEELDEMIAEIDADGSGTVDFDEFMEMM 157
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CAM2_SCHPO (Myosin 1 light chain cam2 OS=Schizosaccharomyces pombe GN=cam2 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.389e-23 Identity = 56/124 (45.16%), Postives = 82/124 (66.13%), Query Frame = -2 Query: 337 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 708 G I T +G+V+RSLG N T+AEL + NE+ ID +F++ ++ K+++T+SEEE +AFRVFDKD +G+I A+ M LGEKL+D EV M++EAD G +Y +FV+ +MAK Sbjct: 24 GLIPTSHVGSVLRSLGINVTDAELAKLSNEL----GDAIDEKKFMSFVSNKLRETESEEEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEADPTNSGSFDYYDFVQRIMAK 143
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CML9_ORYSJ (Probable calcium-binding protein CML9 OS=Oryza sativa subsp. japonica GN=CML9 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.780e-23 Identity = 58/127 (45.67%), Postives = 81/127 (63.78%), Query Frame = -2 Query: 343 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG-----TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 708 G I EL T +RSLGQN EAE + + + A G G IDF FL++ ARKM+ +E+EL VFD ++G I A +LR M + G++LT+EE DEM+R+AD G+G++ Y+EFVKV+M Sbjct: 26 GRIAAGELVTALRSLGQNVDEAEARRFLADATASGGGGGGGGDIDFAAFLSVAARKMRRGATEKELAACLDVFDDARSGVIPAEQLRQAMVSHGDRLTEEEADEMVRKADPAGEGRVEYKEFVKVLM 152
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: TNNC_PATYE (Troponin C OS=Patinopecten yessoensis PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.860e-23 Identity = 49/123 (39.84%), Postives = 82/123 (66.67%), Query Frame = -2 Query: 340 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 708 G ++ K+LG + +SLG + +++D +E+D + G ++ ++ L RK+K+ E ELKEAFRV DK++ G I LR ++++LG++LT+EE++ MI E D DG G ++YEEF +MM+ Sbjct: 27 GTVSCKDLGAIFKSLGLLVKDDKIKDWSDEMDEEATGRLNCDAWIQLFERKLKEDLDERELKEAFRVLDKEKKGVIKVDVLRWILSSLGDELTEEEIENMIAETDTDGSGTVDYEEFKCLMMS 149
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: TNNC1_PONLE (Troponin C, isotype alpha OS=Pontastacus leptodactylus PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.288e-22 Identity = 51/124 (41.13%), Postives = 82/124 (66.13%), Query Frame = -2 Query: 346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSE---EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708 G IT + +G ++R +G +E LQ +I+E D DG+G I+F EF L A+ + + D E +ELKEAFR++D+ +G+I+ LR ++ L +LT++ +DE+I E D DG G I++ EF+K+M Sbjct: 25 GFITPETVGIILRMMGVKISERHLQQVISETDEDGSGEIEFEEFAELAAKFLSEEDEEALKKELKEAFRIYDRGGDGYITTQVLREILKELDNRLTEDNLDEIIEEIDEDGSGTIDFMEFMKMM 148
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CML25_ARATH (Probable calcium-binding protein CML25 OS=Arabidopsis thaliana GN=CML25 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.288e-22 Identity = 58/122 (47.54%), Postives = 78/122 (63.93%), Query Frame = -2 Query: 343 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 708 G I++KELG +M SLG E EL+ I E+D G+G I+F EF+ L + M D E LK+AF V+D D NG ISA EL V+ +LG++ + E +MI D DGDG I++EEF K+MM Sbjct: 51 GKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEFVELNTKGMDQNDVLENLKDAFSVYDIDGNGSISAEELHEVLRSLGDECSIAECRKMIGGVDKDGDGTIDFEEF-KIMM 171
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CATR6_PARTE (Caltractin ICL1f OS=Paramecium tetraurelia GN=Icl1f PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.288e-22 Identity = 51/122 (41.80%), Postives = 75/122 (61.48%), Query Frame = -2 Query: 337 ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 702 I KEL M SLG + MI+++D DG+G IDF EFL LM ++ + DS+ ++++ F +FD ++ GFI+ +LR V LGE + D E+ EMI AD DGD Q+ +E+F +M K Sbjct: 59 IDPKELKAAMTSLGFEAKNQTIYQMISDLDTDGSGQIDFAEFLKLMTARISERDSKADIQKVFNLFDSERAGFITLKDLRKVAKELGETMDDSELQEMIDRADSDGDTQVTFEDFYNIMTKK 180
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: TNNC1_HOMAM (Troponin C, isoform 1 OS=Homarus americanus PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.682e-22 Identity = 50/124 (40.32%), Postives = 81/124 (65.32%), Query Frame = -2 Query: 346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSE---EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708 G IT +G ++R +G ++ LQ++I+E D DG+G I+F EF L A+ + + D E +ELKEAFR++D+ NG+I+ L+ ++ L KLT++ +D +I E D DG G I++ EF+K+M Sbjct: 25 GFITPDTVGVILRMMGVKISDRHLQEVISETDEDGSGEIEFEEFAALAAKFLSEEDEEALKKELKEAFRIYDRGGNGYITVHTLKEILRELDNKLTEDNLDSIIEEVDEDGSGTIDFNEFMKMM 148
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CALM4_MOUSE (Calmodulin-4 OS=Mus musculus GN=Calm4 PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.682e-22 Identity = 53/120 (44.17%), Postives = 82/120 (68.33%), Query Frame = -2 Query: 349 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 708 G I+ +ELG VM+ LG+N E +L+ +I+++D DG+G I F EFL + K K EL+ F V D++ +G+I+ EL+ ++ LGE L+ EE+++MIR ADVD DG++ YEEFV++ Sbjct: 26 GHISVEELGDVMKQLGKNLPEKDLKALISKLDTDGDGKISFEEFLTAI-EKYKKGHRAGELRAVFNVLDQNGDGYITVDELKESLSKLGESLSQEELEDMIRVADVDQDGKVKYEEFVRL 144 The following BLAST results are available for this feature:
BLAST of CF832293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 411
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832293 ID=CF832293; Name=CF832293; organism=Citrus sinensis; type=EST; length=709bpback to top |