CF832293
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: TNNCA_HOMAM (Troponin C, isoform 2A OS=Homarus americanus PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.869e-22 Identity = 49/124 (39.52%), Postives = 83/124 (66.94%), Query Frame = -2 Query: 346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708 G IT + +G ++R +G +E LQ++I E D DG+G ++F EF+ L A+ + + D E EL+EAFRV+DK+ NG+I+ L+ ++ L +LT+E++D +I E D DG G +++ EF+++M Sbjct: 25 GFITPETVGVILRMMGVKISEKNLQEVIAETDEDGSGELEFEEFVELAAKFLIEEDEEALKTELREAFRVYDKEGNGYITTDVLKEILRELDNRLTEEDLDSIIEEVDEDGSGTLDFNEFMEMM 148
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CML14_ORYSJ (Probable calcium-binding protein CML14 OS=Oryza sativa subsp. japonica GN=CML14 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.747e-22 Identity = 55/124 (44.35%), Postives = 78/124 (62.90%), Query Frame = -2 Query: 346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708 G +T EL ++RSLG PT E+ ++ +DA+GNG+++F E +A + + +L E FR FD+D NGFISAAEL M LG+ LT EE+ M+R+AD DGDG I+++EF VM Sbjct: 39 GSLTQLELAALLRSLGLRPTGDEVHALLAGMDANGNGSVEFDELAAAIAPVLTTQTHLVDQAQLLEVFRAFDRDGNGFISAAELARSMARLGQPLTFEELTRMMRDADTDGDGVISFKEFAAVM 162
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CML10_ORYSJ (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica GN=CML10 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.747e-22 Identity = 63/124 (50.81%), Postives = 77/124 (62.10%), Query Frame = -2 Query: 340 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDS-EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 708 G I+ ELG + SLG T+ EL M+ E DADG+G I EF L A D + EE+L+ AFRVFD D NG ISAAEL V+ LGEK T ++ MI D +GDG I++EEF KVMMA Sbjct: 54 GRISRSELGALFESLGHAATDDELARMMAEADADGDGFISLDEFAALNATASGDAAAVEEDLRHAFRVFDADGNGTISAAELARVLHGLGEKATVQQCRRMIEGVDQNGDGLISFEEF-KVMMA 176
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: TNNC_TODPA (Troponin C OS=Todarodes pacificus PE=1 SV=3) HSP 1 Score: 104.76 bits (260), Expect = 4.893e-22 Identity = 47/122 (38.52%), Postives = 78/122 (63.93%), Query Frame = -2 Query: 343 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 708 G ++ KEL + +SL + ++ +LQ ++E+D D G I + +F L RK+++ + E EL+ AFRV DK+ G I +LR ++ +LG+ L D+E+ +MI E D DG G ++YEEF +M+ Sbjct: 26 GAVSNKELTNLFKSLALHVSDDKLQQWVDEMDEDATGVIRWEKFKILFERKVQEDEDERELRSAFRVLDKNNQGVIDVEDLRWILKSLGDDLNDDEIQDMINETDTDGSGTVDYEEFSALML 147
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CATR4_PARTE (Caltractin ICL1d OS=Paramecium tetraurelia GN=Icl1d PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.893e-22 Identity = 50/122 (40.98%), Postives = 74/122 (60.66%), Query Frame = -2 Query: 337 ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 702 I KEL M SLG + MI+++D DG+G IDF EFL LM ++ + DS+ ++++ F +FD ++ G I+ +LR V LGE + D E+ EMI AD DGD Q+ +E+F +M K Sbjct: 57 IDPKELKAAMTSLGFEAKNQTIYQMISDLDTDGSGQIDFAEFLKLMTARISERDSKADIQKVFNLFDSERAGVITLKDLRKVAKELGETMDDSELQEMIDRADSDGDAQVTFEDFYNIMTKK 178
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CATR3_PARTE (Caltractin ICL1c OS=Paramecium tetraurelia GN=Icl1c PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.893e-22 Identity = 50/122 (40.98%), Postives = 74/122 (60.66%), Query Frame = -2 Query: 337 ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 702 I KEL M SLG + MI+++D DG+G IDF EFL LM ++ + DS+ ++++ F +FD ++ G I+ +LR V LGE + D E+ EMI AD DGD Q+ +E+F +M K Sbjct: 59 IDPKELKAAMTSLGFEAKNQTIYQMISDLDTDGSGQIDFAEFLKLMTARISERDSKADIQKVFNLFDSERAGVITLKDLRKVAKELGETMDDSELQEMIDRADSDGDAQVTFEDFYNIMTKK 180
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CATR2_PARTE (Caltractin ICL1b OS=Paramecium tetraurelia GN=Icl1b PE=3 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 4.893e-22 Identity = 50/122 (40.98%), Postives = 74/122 (60.66%), Query Frame = -2 Query: 337 ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 702 I KEL M SLG + MI+++D DG+G IDF EFL LM ++ + DS+ ++++ F +FD ++ G I+ +LR V LGE + D E+ EMI AD DGD Q+ +E+F +M K Sbjct: 58 IDPKELKAAMTSLGFEAKNQTIYQMISDLDTDGSGQIDFAEFLKLMTARISERDSKADIQKVFNLFDSERAGVITLKDLRKVAKELGETMDDSELQEMIDRADSDGDAQVTFEDFYNIMTKK 179
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: TNNCB_HOMAM (Troponin C, isoform 2B OS=Homarus americanus PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.391e-22 Identity = 48/124 (38.71%), Postives = 83/124 (66.94%), Query Frame = -2 Query: 346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708 G IT + +G ++R +G +E LQ++I+E D DG+G ++F EF+ L A+ + + D E EL+EAFRV+D+ NG+I+ L+ ++ L +LT+E++D +I E D DG G +++ EF+++M Sbjct: 25 GFITPETVGVILRMMGVKISEKNLQEVISETDEDGSGELEFEEFVELAAKFLIEEDEEALKAELREAFRVYDRGGNGYITTDVLKEILRELDNRLTEEDLDSIIEEVDEDGSGTLDFNEFMQMM 148
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CATR1_PARTE (Caltractin ICL1a OS=Paramecium tetraurelia GN=Icl1a PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 6.391e-22 Identity = 49/122 (40.16%), Postives = 74/122 (60.66%), Query Frame = -2 Query: 337 ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 702 I KEL M SLG + MI+++D DG+G IDF EFL LM ++ + DS+ ++++ F +FD ++ G ++ +LR V LGE + D E+ EMI AD DGD Q+ +E+F +M K Sbjct: 57 IDPKELKAAMTSLGFEAKNQTIYQMISDLDTDGSGQIDFAEFLKLMTARISERDSKADIQKVFNLFDSERAGVVTLKDLRKVAKELGETMDDSELQEMIDRADSDGDAQVTFEDFYNIMTKK 178
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: MYL9_MOUSE (Myosin regulatory light polypeptide 9 OS=Mus musculus GN=Myl9 PE=1 SV=3) HSP 1 Score: 103.99 bits (258), Expect = 8.347e-22 Identity = 50/121 (41.32%), Postives = 76/121 (62.81%), Query Frame = -2 Query: 346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708 G I ++L ++ SLG+NPT+ L+ M+NE G I+F FL + K+ TD E+ ++ AF FD++ +GFI LR ++T +G++ TDEEVDEM REA +D G NY EF +++ Sbjct: 47 GFIDKEDLHDMLASLGKNPTDEYLEGMMNEAP----GPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRIL 163 The following BLAST results are available for this feature:
BLAST of CF832293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 411
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832293 ID=CF832293; Name=CF832293; organism=Citrus sinensis; type=EST; length=709bpback to top |