CF832293

Overview
NameCF832293
Unique NameCF832293
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CDPKR_ARATH (Calcium-dependent protein kinase 27 OS=Arabidopsis thaliana GN=CPK27 PE=1 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 1.379e-16
Identity = 49/129 (37.98%), Postives = 75/129 (58.14%), Query Frame = -2
Query:  322 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK**PQP 708
            G IT +EL T +  LG N ++ E++ ++   D DGNGTID  EF++    + K  D +E + +AF+ FDKD +G I+  EL   M   G    +  + ++I +AD D DG+IN+EEF  +M  +   QP
Sbjct:  350 GNITLEELKTGLTRLGSNLSKTEVEQLMEAADMDGNGTIDIDEFISATMHRYK-LDRDEHVYKAFQHFDKDNDGHITKEELEMAMKEDGAG-DEGSIKQIIADADTDNDGKINFEEFRTMMRTESSLQP 476          
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CDPK4_ARATH (Calcium-dependent protein kinase 4 OS=Arabidopsis thaliana GN=CPK4 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.379e-16
Identity = 49/123 (39.84%), Postives = 74/123 (60.16%), Query Frame = -2
Query:  346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL--NLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708
            G IT +EL   ++ +G    E+E++ +++  D D +GTID+ EFL   L   KM   + EE L  AF  FDKD +G+I+  EL+   T  G  L D  +D+MI+E D+D DG+I++ EF  +M
Sbjct:  344 GTITFEELKAGLKRVGSELMESEIKSLMDAADIDNSGTIDYGEFLAATLHINKM---EREENLVVAFSYFDKDGSGYITIDELQQACTEFG--LCDTPLDDMIKEIDLDNDGKIDFSEFTAMM 461          
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CDPKX_ARATH (Calcium-dependent protein kinase 33 OS=Arabidopsis thaliana GN=CPK33 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.801e-16
Identity = 47/129 (36.43%), Postives = 75/129 (58.14%), Query Frame = -2
Query:  322 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK**PQP 708
            G IT +EL   +  LG   TEAE++ +++  D DGNG+ID+ EF+     + +  +S E + +AF+ FDKD +G+I+  EL   +   G    D  + E++ + D D DG+INY+EF  +M +    QP
Sbjct:  392 GTITYEELKEGLAKLGSRLTEAEVKQLMDAADVDGNGSIDYIEFITATMHRHR-LESNENVYKAFQHFDKDGSGYITTDELEAALKEYGMG-DDATIKEILSDVDADNDGRINYDEFCAMMRSGNPQQP 518          
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: MLR_DICDI (Myosin regulatory light chain OS=Dictyostelium discoideum GN=mlcR PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.352e-16
Identity = 44/124 (35.48%), Postives = 71/124 (57.26%), Query Frame = -2
Query:  337 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 708
            G I    L T  +  G    E +L  M  E D   +G I FPEF+++M+R+MK T +E+ L  AF+ FD + NG+I   +L   +T LG+KLT+ E+ E++  ++ +   Q+ Y+ FV  + +K
Sbjct:   38 GFIKKDALKTTCKQFGVFVMEDQLDAMFAEADTTKSGAIGFPEFMSMMSRRMKQTSNEQILMNAFKTFDPEGNGYILTKDLSKALTTLGDKLTEAELQELLSISE-NEQKQVKYDLFVNTLFSK 160          
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CDPK_SOYBN (Calcium-dependent protein kinase SK5 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.352e-16
Identity = 46/121 (38.02%), Postives = 71/121 (58.68%), Query Frame = -2
Query:  346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708
            G IT  EL   ++ +G    E+E++D+++  D D +GTID+ EF+      +   + EE L  AF  FDKD +G+I+  E++    + G  L D  +D+MI+E D D DGQI+Y EF  +M
Sbjct:  353 GTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVH-LNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKEIDQDNDGQIDYGEFAAMM 470          
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CDPK_DAUCA (Calcium-dependent protein kinase OS=Daucus carota PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.352e-16
Identity = 49/122 (40.16%), Postives = 71/122 (58.20%), Query Frame = -2
Query:  346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE-EVDEMIREADVDGDGQINYEEFVKVM 708
            G IT +EL + +  LG   +E E+Q +++  D DGNGTID+ EF+     + K    E    +AF+ FDKD +GFI+  EL   M   G  + DE  + ++I E D D DG+INY+EF  +M
Sbjct:  400 GTITYEELKSGLARLGSKLSEVEVQQLMDAADVDGNGTIDYLEFITATMHRHKLESYEH---QAFQYFDKDNSGFITKDELESAMKEYG--MGDEATIKDIISEVDSDNDGRINYDEFCAMM 516          
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CDPKV_ARATH (Calcium-dependent protein kinase 31 OS=Arabidopsis thaliana GN=CPK31 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.352e-16
Identity = 47/122 (38.52%), Postives = 73/122 (59.84%), Query Frame = -2
Query:  346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE-EVDEMIREADVDGDGQINYEEFVKVM 708
            G IT +EL T +  LG N ++ E++ ++   D DGNGTID  EF++    + +  D ++ + +AF+ FDKD +G I+  EL   M   G  + DE  + ++I E D D DG+IN+EEF  +M
Sbjct:  350 GTITLEELKTGLTRLGSNLSKTEVEQLMEAADVDGNGTIDIDEFISATMHRYR-LDRDDHVYQAFQHFDKDNDGHITKEELEMAMKEHG--VGDEVSIKQIITEVDTDNDGKINFEEFRTMM 468          
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CDPKQ_ARATH (Calcium-dependent protein kinase 26 OS=Arabidopsis thaliana GN=CPK26 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.352e-16
Identity = 46/121 (38.02%), Postives = 71/121 (58.68%), Query Frame = -2
Query:  346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708
            G IT  EL   +R  G    + E++D++   D D +GTID+ EF+      +   + EE L  AFR FDKD +G+I+  EL+H     G  ++D  ++++I+E D D DG+I+Y EFV +M
Sbjct:  343 GAITFDELKAGLRRYGSTLKDTEIRDLMEAADIDKSGTIDYGEFIAATIH-LNKLEREEHLLSAFRYFDKDGSGYITIDELQHACAEQG--MSDVFLEDVIKEVDQDNDGRIDYGEFVAMM 460          
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CML1_ARATH (Calmodulin-like protein 1 OS=Arabidopsis thaliana GN=CML1 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.072e-16
Identity = 46/121 (38.02%), Postives = 71/121 (58.68%), Query Frame = -2
Query:  346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708
            G I+  E   V+R+LGQ     ++  +   VD DG+G IDF EF++  A K        +++ +F  FD + +G ISA E+  V+  LGE+ + E+ + M+R  D DGDG +N EEF+K+M
Sbjct:   64 GKISQTEYKVVLRALGQERAIEDVPKIFKAVDLDGDGFIDFREFID--AYKRSGGIRSSDIRNSFWTFDLNGDGKISAEEVMSVLWKLGERCSLEDCNRMVRAVDADGDGLVNMEEFIKMM 182          
BLAST of CF832293 vs. ExPASy Swiss-Prot
Match: CDPKB_ARATH (Calcium-dependent protein kinase 11 OS=Arabidopsis thaliana GN=CPK11 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.072e-16
Identity = 47/121 (38.84%), Postives = 72/121 (59.50%), Query Frame = -2
Query:  346 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 708
            G IT +EL   ++ +G    E+E++ +++  D D +GTID+ EFL      M   + EE L  AF  FDKD +G+I+  EL+   T  G  L D  +D+MI+E D+D DG+I++ EF  +M
Sbjct:  345 GTITFEELKAGLKRVGSELMESEIKSLMDAADIDNSGTIDYGEFL-AATLHMNKMEREEILVAAFSDFDKDGSGYITIDELQSACTEFG--LCDTPLDDMIKEIDLDNDGKIDFSEFTAMM 462          
The following BLAST results are available for this feature:
BLAST of CF832293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 411
Match NameE-valueIdentityDescription
CDPKR_ARATH1.379e-1637.98Calcium-dependent protein kinase 27 OS=Arabidopsis... [more]
CDPK4_ARATH1.379e-1639.84Calcium-dependent protein kinase 4 OS=Arabidopsis ... [more]
CDPKX_ARATH1.801e-1636.43Calcium-dependent protein kinase 33 OS=Arabidopsis... [more]
MLR_DICDI2.352e-1635.48Myosin regulatory light chain OS=Dictyostelium dis... [more]
CDPK_SOYBN2.352e-1638.02Calcium-dependent protein kinase SK5 OS=Glycine ma... [more]
CDPK_DAUCA2.352e-1640.16Calcium-dependent protein kinase OS=Daucus carota ... [more]
CDPKV_ARATH2.352e-1638.52Calcium-dependent protein kinase 31 OS=Arabidopsis... [more]
CDPKQ_ARATH2.352e-1638.02Calcium-dependent protein kinase 26 OS=Arabidopsis... [more]
CML1_ARATH3.072e-1638.02Calmodulin-like protein 1 OS=Arabidopsis thaliana ... [more]
CDPKB_ARATH3.072e-1638.84Calcium-dependent protein kinase 11 OS=Arabidopsis... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01K03_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01K03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832293 ID=CF832293; Name=CF832293; organism=Citrus sinensis; type=EST; length=709bp
TTTTGATACATACGATAGGAGACATATTTCGACCGAAAGAAAAATAAACA
TCGGAAGGGCAGAAATTAATGAAACACATTAAACAGACAACAACATTCAT
AGAACAGCGGAACAACTAAAATAATAAAAACCGAAAAGTTTTGCGAGTCA
CAAGACATATTGACGAGGGAGACAACATTCTTCCTACACCATCAGGCCCA
TCACCATTAAAAGACCATTGCTTCCTTTAGCCTGACCCTCATGACTATCA
AATTAAAAATTGGAAAAGAGAAAACTAGGAATCCCTTTATAATTTAGTCA
ACCCATTTTATAAGTATTGGTGGGTTGGGGTCATTACTTGGCCATCATAA
CCTTGACAAATTCCTCATAATTTATCTGGCCATCACCATCAACATCAGCT
TCCCTTATCATCTCATCAACTTCTTCATCAGTAAGTTTCTCTCCTAGGTT
TGTCATCACATGGCGCAGCTCAGCAGCTGAGATGAAACCATTCTGATCCT
TGTCGAAAACCCGGAAGGCCTCTTTCAGCTCCTCCTCAGAGTCGGTATCC
TTCATCTTCCTGGCCATGAGGTTTAGGAATTCAGGAAAATCAATAGTTCC
ATTACCATCAGCATCCACTTCATTGATCATGTCCTGGAGCTCAGCCTCAG
TGGGGTTCTGACCCAGTGACCTCATAACAGTGCCAAGCTCCTTGGTGGTA
ATGCAACCG
back to top