CF832303

Overview
NameCF832303
Unique NameCF832303
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11644 contig Csv1_Contig11644:328..1029. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: NCPR_PIG (NADPH--cytochrome P450 reductase OS=Sus scrofa GN=POR PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.229e-18
Identity = 46/96 (47.92%), Postives = 61/96 (63.54%), Query Frame = -1
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEG-AYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            F   GAL++L VAFSRE P K YVQH +      +W ++ +G A++Y+CGDA+ MARDV  T   IV EQG ++ ++A   VK L   GRY  DVW
Sbjct:  582 FHAKGALTRLSVAFSREQPQKVYVQHLLKRDKEHLWKLIHDGGAHIYICGDARNMARDVQNTFCDIVAEQGPMEHAQAVDYVKKLMTKGRYSLDVW 677          
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_VIBVY (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Vibrio vulnificus (strain YJ016) GN=cysJ PE=3 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.217e-18
Identity = 40/95 (42.11%), Postives = 63/95 (66.32%), Query Frame = -1
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +++SG L++L VAFSR+   K YVQ +++E +  +W  + EGAYLYVCGDA  MA+DVH+    + +++G +    AE  + +L+   RY RDV+
Sbjct:  522 YLKSGLLTKLDVAFSRDQAEKVYVQQRILENAAQVWQWIQEGAYLYVCGDANRMAKDVHQAFVAVAEQEGKMSRGDAEEFINDLRKAKRYQRDVY 616          
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_VIBVU (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Vibrio vulnificus GN=cysJ PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.217e-18
Identity = 40/95 (42.11%), Postives = 63/95 (66.32%), Query Frame = -1
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +++SG L++L VAFSR+   K YVQ +++E +  +W  + EGAYLYVCGDA  MA+DVH+    + +++G +    AE  + +L+   RY RDV+
Sbjct:  522 YLKSGLLTKLDVAFSRDQAEKVYVQQRILENAAQVWQWIQEGAYLYVCGDANRMAKDVHQAFVAVAEQEGKMSRDDAEEFINDLRKAKRYQRDVY 616          
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_PHOPR (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Photobacterium profundum GN=cysJ PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.217e-18
Identity = 41/95 (43.16%), Postives = 64/95 (67.37%), Query Frame = -1
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +++SG + QL VAFSR+   K YVQH+++E +  +W  L EGA++YVCGD   MA+DVH  L T++++QG     +AE  +  L+ + RY +DV+
Sbjct:  511 YLKSGVVQQLDVAFSRDQVEKVYVQHRVLEHAEQVWQWLQEGAHVYVCGDMNHMAKDVHDALLTVIEQQGKQSREQAEQYLNELRKSKRYQKDVY 605          
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_BACSU (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Bacillus subtilis GN=cysJ PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.395e-18
Identity = 41/95 (43.16%), Postives = 67/95 (70.53%), Query Frame = -1
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +++ G L+++ VAFSR+   K YVQH+M+E S +++  L EGA +Y+CGD K MA DVH TL  I++++G++   +AE+ + ++Q   RY RDV+
Sbjct:  511 WLKDGVLTKMDVAFSRDTEEKVYVQHRMLEHSAELFEWLQEGAAVYICGDEKHMAHDVHNTLLEIIEKEGNMSREEAEAYLADMQQQKRYQRDVY 605          
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: NCPR_MOUSE (NADPH--cytochrome P450 reductase OS=Mus musculus GN=Por PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.227e-17
Identity = 46/96 (47.92%), Postives = 61/96 (63.54%), Query Frame = -1
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEG-AYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            F + GAL+QL VAFSRE   K YVQH +      +W ++ EG A++YVCGDA+ MA+DV  T + IV E G ++ ++A   VK L   GRY  DVW
Sbjct:  582 FHKDGALTQLNVAFSREQAHKVYVQHLLKRDKEHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPMEHTQAVDYVKKLMTKGRYSLDVW 677          
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: NCPR_RAT (NADPH--cytochrome P450 reductase OS=Rattus norvegicus GN=Por PE=1 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 1.602e-17
Identity = 46/96 (47.92%), Postives = 61/96 (63.54%), Query Frame = -1
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEG-AYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            F + GAL+QL VAFSRE   K YVQH +      +W ++ EG A++YVCGDA+ MA+DV  T + IV E G ++ ++A   VK L   GRY  DVW
Sbjct:  582 FHKDGALTQLNVAFSREQAHKVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPMEHTQAVDYVKKLMTKGRYSLDVW 677          
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_ERWCT (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Erwinia carotovora subsp. atroseptica GN=cysJ PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.093e-17
Identity = 40/95 (42.11%), Postives = 64/95 (67.37%), Query Frame = -1
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +V+ G L+ + +A+SR+   K YVQ K+ EK  ++W  + +GA+LYVCGDA  MA+DV R L  ++ E G +DS +A+  + +L++  RY RDV+
Sbjct:  515 YVKEGLLTHIDLAWSRDQAHKIYVQDKLREKGAEVWRWIQDGAHLYVCGDANRMAKDVERALLDVIVEHGGMDSEQADEFLSDLRLERRYQRDVY 609          
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: NCPR_CAVPO (NADPH--cytochrome P450 reductase OS=Cavia porcellus GN=POR PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 7.953e-17
Identity = 45/96 (46.88%), Postives = 58/96 (60.42%), Query Frame = -1
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSE-GAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            F + G L+QL VAFSRE   K YVQH +      +W ++ E GA++YVCGDA+ MARDV  T   I  E G ++ ++A   VK L   GRY  DVW
Sbjct:  582 FHKDGTLTQLNVAFSREQAQKVYVQHLLKRDQEHLWKLIHEDGAHIYVCGDARNMARDVQNTFCNIAAELGGMEHTQAVDYVKKLMTKGRYSLDVW 677          
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: NCPR_ASPNG (NADPH--cytochrome P450 reductase OS=Aspergillus niger GN=cprA PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.357e-16
Identity = 44/93 (47.31%), Postives = 59/93 (63.44%), Query Frame = -1
Query:  418 QSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 696
            Q G   ++I AFSREGP K YVQH++ E S  + ++L + A  YVCGDA  MAR+V+  L  I+  Q  L + K E MVK+++  GRY  DVW
Sbjct:  600 QLGDNLKIITAFSREGPQKVYVQHRLREHSELVSDLLKQKATFYVCGDAANMAREVNLVLGQIIAAQRGLPAEKGEEMVKHMRRRGRYQEDVW 692          
The following BLAST results are available for this feature:
BLAST of CF832303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
NCPR_PIG3.229e-1847.92NADPH--cytochrome P450 reductase OS=Sus scrofa GN=... [more]
CYSJ_VIBVY4.217e-1842.11Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_VIBVU4.217e-1842.11Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_PHOPR4.217e-1843.16Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_BACSU9.395e-1843.16Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
NCPR_MOUSE1.227e-1747.92NADPH--cytochrome P450 reductase OS=Mus musculus G... [more]
NCPR_RAT1.602e-1747.92NADPH--cytochrome P450 reductase OS=Rattus norvegi... [more]
CYSJ_ERWCT2.093e-1742.11Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
NCPR_CAVPO7.953e-1746.88NADPH--cytochrome P450 reductase OS=Cavia porcellu... [more]
NCPR_ASPNG1.357e-1647.31NADPH--cytochrome P450 reductase OS=Aspergillus ni... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01K08_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01K08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832303 ID=CF832303; Name=CF832303; organism=Citrus sinensis; type=EST; length=702bp
TTTTTTTTTTTCTTTTTAAATGAGAAACCAAACTTGCAGTTTATATTATC
CATATGCAAAAGAGTTACGTAAAGAGGGGTACAACATATTCAGTCGATTG
AACCATTTTTGGTTCTTATATGGAAAATCTGAGTTCACAATGCTACGCCT
AGCGAGTAACGATAATTACCATATTCTGTATTTATAAATTACATGAACAA
AAAATTCCATCATATGGTAAGGGTAAAAAAGAAAAAAAAAAAAGAAAAAA
AGAATCGCAGTTGCCTTTTCGGGGTGCGGGAGGCAGGACCCACACAAATA
GCCTTTCCGTTGAGTGCTTTTCAAATGAGCTGGCCCGAGATAACATATTT
ATGTATGTATTATGCAATCACCTTCGAATTTTACTAGTGAGAAGACTCAG
GATCAGAAGGATGGTCACCATACATCACGTAGATACCTGCCAGTCATTTG
CAAATTCTTCACCATGCTCTCAGCTTTAGAGCTGTCAAGAGATCCCTGCT
CTTGAACAATAGTGTGCAGAGTTCGGTGGACATCTCTAGCCATGCCTTTG
GCATCACCACAAACATACAAGTAAGCTCCCTCAGAAAGCATGTTCCAGAT
ATCCCAAGACTTCTCCATCATTTTATGCTGCACATATTCCTTGATGGGTC
CCTCACGTGAGAAGGCAACAATCAACTGTGAAAGTGCACCACTTTGAACA
AA
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