CF832303

Overview
NameCF832303
Unique NameCF832303
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11644 contig Csv1_Contig11644:328..1029. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_NEIMA (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Neisseria meningitidis serogroup A GN=cysJ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.188e-12
Identity = 39/95 (41.05%), Postives = 55/95 (57.89%), Query Frame = -1
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            F + G L +   A+SR+   K YVQ K+ E++  +W  L EGA++YVCGDA  MA+DV   L  ++   G LD   AE  +  L+   RY RDV+
Sbjct:  510 FAKDGFLHRYDFAWSRDQEEKIYVQDKIREQAEGLWQWLQEGAHIYVCGDAAKMAKDVEAALLDVIIGAGHLDEEGAEEYLDMLREEKRYQRDVY 604          
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: CYSJ_NEIM0 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Neisseria meningitidis serogroup C (strain 053442) GN=cysJ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.188e-12
Identity = 39/95 (41.05%), Postives = 55/95 (57.89%), Query Frame = -1
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            F + G L +   A+SR+   K YVQ K+ E++  +W  L EGA++YVCGDA  MA+DV   L  ++   G LD   AE  +  L+   RY RDV+
Sbjct:  510 FAKDGFLHRYDFAWSRDQEEKIYVQDKIREQAEGLWQWLQEGAHIYVCGDAAKMAKDVEAALLDVIIGAGHLDEEGAEEYLDMLREEKRYQRDVY 604          
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: NDOR1_HUMAN (NADPH-dependent diflavin oxidoreductase 1 OS=Homo sapiens GN=NDOR1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12
Identity = 38/87 (43.68%), Postives = 51/87 (58.62%), Query Frame = -1
Query:  418 LIVAFSREGPIKEYVQHKMMEKSWDIWNMLS-EGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 675
            LI AFSRE   K YVQH++ E    +W +L  +GAY Y+ G+AK M  DV   L +I QE+G L S  A + +  LQ T R+  + W
Sbjct:  510 LIPAFSREQEQKVYVQHRLRELGSLVWELLDRQGAYFYLAGNAKSMPADVSEALMSIFQEEGGLCSPDAAAYLARLQQTRRFQTETW 596          
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: NCPR_YEAST (NADPH--cytochrome P450 reductase OS=Saccharomyces cerevisiae GN=NCP1 PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 7.703e-12
Identity = 35/88 (39.77%), Postives = 56/88 (63.64%), Query Frame = -1
Query:  418 QLIVAFSREGPIKE-YVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 678
            +++VA SR    K+ YVQ K+ +    ++ M++ GA++YVCGDAKGMA+ V   L  I+    S+ + +A  ++K L+ +GRY  DVW
Sbjct:  604 EMVVAHSRLPNTKKVYVQDKLKDYEDQVFEMINNGAFIYVCGDAKGMAKGVSTALVGILSRGKSITTDEATELIKMLKTSGRYQEDVW 691          
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: NDOR1_MOUSE (NADPH-dependent diflavin oxidoreductase 1 OS=Mus musculus GN=Ndor1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11
Identity = 38/94 (40.43%), Postives = 56/94 (59.57%), Query Frame = -1
Query:  418 QSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLS-EGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 696
            Q G L+ L+ AFSRE   K YVQH++ E    +W +L  +GAY Y+ G+AK +  DV   L +I QE+G L ++ A + +  LQ T R+  + W
Sbjct:  505 QKGWLT-LVTAFSREQEQKVYVQHRLRELGPLVWELLDGQGAYFYLAGNAKYLPTDVSEALMSIFQEEGRLSTADASAYLARLQQTLRFQTETW 597          
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: NCPR_DROME (NADPH--cytochrome P450 reductase OS=Drosophila melanogaster GN=Cpr PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.823e-11
Identity = 37/96 (38.54%), Postives = 56/96 (58.33%), Query Frame = -1
Query:  418 FVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEG-AYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            +V+ G L+ L  AFSR+   K YVQH + + +  IWN++ E   + Y+CGDAK MA DV   L  I+  +G++  + A   +K ++   RY  DVW
Sbjct:  584 WVKKGTLN-LKAAFSRDQGKKVYVQHLLEQDADLIWNVIGENKGHFYICGDAKNMAVDVRNILVKILSTKGNMSEADAVQYIKKMEAQKRYSADVW 678          
BLAST of CF832303 vs. ExPASy Swiss-Prot
Match: MTRR_HUMAN (Methionine synthase reductase, mitochondrial OS=Homo sapiens GN=MTRR PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.521e-11
Identity = 36/102 (35.29%), Postives = 58/102 (56.86%), Query Frame = -1
Query:  418 FVQSGALSQLIVAFSREGPIKE------YVQHKMMEKSWDIWN-MLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 702
            F++ G L+ L V+FSR+ P+ E      YVQ  +      +   +L E  ++YVCGDAK MA+DVH  L  I+ ++  ++  +A   +  L+   RYL+D+W
Sbjct:  623 FLKHGILTHLKVSFSRDAPVGEEEAPAKYVQDNIQLHGQQVARILLQENGHIYVCGDAKNMAKDVHDALVQIISKEVGVEKLEAMKTLATLKEEKRYLQDIW 724          
The following BLAST results are available for this feature:
BLAST of CF832303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
CYSJ_NEIMA1.188e-1241.05Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_NEIM01.188e-1241.05Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
NDOR1_HUMAN5.898e-1243.68NADPH-dependent diflavin oxidoreductase 1 OS=Homo ... [more]
NCPR_YEAST7.703e-1239.77NADPH--cytochrome P450 reductase OS=Saccharomyces ... [more]
NDOR1_MOUSE2.241e-1140.43NADPH-dependent diflavin oxidoreductase 1 OS=Mus m... [more]
NCPR_DROME3.823e-1138.54NADPH--cytochrome P450 reductase OS=Drosophila mel... [more]
MTRR_HUMAN6.521e-1135.29Methionine synthase reductase, mitochondrial OS=Ho... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01K08_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01K08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832303 ID=CF832303; Name=CF832303; organism=Citrus sinensis; type=EST; length=702bp
TTTTTTTTTTTCTTTTTAAATGAGAAACCAAACTTGCAGTTTATATTATC
CATATGCAAAAGAGTTACGTAAAGAGGGGTACAACATATTCAGTCGATTG
AACCATTTTTGGTTCTTATATGGAAAATCTGAGTTCACAATGCTACGCCT
AGCGAGTAACGATAATTACCATATTCTGTATTTATAAATTACATGAACAA
AAAATTCCATCATATGGTAAGGGTAAAAAAGAAAAAAAAAAAAGAAAAAA
AGAATCGCAGTTGCCTTTTCGGGGTGCGGGAGGCAGGACCCACACAAATA
GCCTTTCCGTTGAGTGCTTTTCAAATGAGCTGGCCCGAGATAACATATTT
ATGTATGTATTATGCAATCACCTTCGAATTTTACTAGTGAGAAGACTCAG
GATCAGAAGGATGGTCACCATACATCACGTAGATACCTGCCAGTCATTTG
CAAATTCTTCACCATGCTCTCAGCTTTAGAGCTGTCAAGAGATCCCTGCT
CTTGAACAATAGTGTGCAGAGTTCGGTGGACATCTCTAGCCATGCCTTTG
GCATCACCACAAACATACAAGTAAGCTCCCTCAGAAAGCATGTTCCAGAT
ATCCCAAGACTTCTCCATCATTTTATGCTGCACATATTCCTTGATGGGTC
CCTCACGTGAGAAGGCAACAATCAACTGTGAAAGTGCACCACTTTGAACA
AA
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