CF832324

Overview
NameCF832324
Unique NameCF832324
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832324 vs. ExPASy Swiss-Prot
Match: METK_OSTTA (S-adenosylmethionine synthetase OS=Ostreococcus tauri GN=METK PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.333e-55
Identity = 111/155 (71.61%), Postives = 121/155 (78.06%), Query Frame = -1
Query:  325 NPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDFKRGGNGRFLKTAAYGHFGRDDPD-FTWEVVKPL 786
            NPSGRFVIGGP GDAGLTGRKIIIDTY            GKDPTKVDRSGAYI RQ AKSIVA GLARR + Q+SYAIGV +PLS+ VD+YG+GKIPD EIL+ VKE FDFR GM+  +LD KRGGN R+  TAAYGHFGRDD D FTWE V PL
Sbjct:  232 NPSGRFVIGGPDGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQVAKSIVAAGLARRALFQISYAIGVAQPLSIHVDTYGSGKIPDSEILEKVKEKFDFRAGMIGKSLDLKRGGNKRYQTTAAYGHFGRDDTDVFTWEKVVPL 386          
BLAST of CF832324 vs. ExPASy Swiss-Prot
Match: METK2_PEA (S-adenosylmethionine synthetase 2 OS=Pisum sativum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.579e-54
Identity = 107/139 (76.98%), Postives = 116/139 (83.45%), Query Frame = -1
Query:  370 NPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDFKRGGNGRFLKTAAYGHF 786
            NPSGRF  GGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVR+AAKSIVANGLARRC+VQVSYAIGVPEPLSVFVDSYGTGKIPD+EIL IVKE+FDFRPGM++I+LD  RGGNGRF + +    F
Sbjct:  235 NPSGRFRHGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVREAAKSIVANGLARRCLVQVSYAIGVPEPLSVFVDSYGTGKIPDREILNIVKEAFDFRPGMISISLDLLRGGNGRFFEDSCIWTF 373          
BLAST of CF832324 vs. ExPASy Swiss-Prot
Match: METK_DICDI (S-adenosylmethionine synthetase OS=Dictyostelium discoideum GN=metK PE=1 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.885e-47
Identity = 99/155 (63.87%), Postives = 112/155 (72.26%), Query Frame = -1
Query:  322 NPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDFKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 786
            NPSGRFVIGGP GD+GLTGRKIIID+Y            GKD TKVDRSGAY  R  AKS+VA GLA RC+VQVSY+IGV +PLSVFVD+YGTGK  D EIL I+  +FD RPG +  +L   R     F KTA+ GHFGR+DPDFTWE VK LK
Sbjct:  232 NPSGRFVIGGPMGDSGLTGRKIIIDSYGGWGAHGGGAFSGKDATKVDRSGAYAARWIAKSLVAAGLADRCLVQVSYSIGVAKPLSVFVDTYGTGKKTDAEILAIIDNNFDLRPGCLMRDLQLTR---PIFQKTASGGHFGRNDPDFTWETVKELK 383          
BLAST of CF832324 vs. ExPASy Swiss-Prot
Match: METK_SYNWW (S-adenosylmethionine synthetase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=metK PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.201e-43
Identity = 86/149 (57.72%), Postives = 112/149 (75.17%), Query Frame = -1
Query:  340 NPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDFKRGGNGRFLKTAAYGHFGRDDPDFTWE 786
            NP+GRFVIGGP GD+GLTGRKII+DTY            GKDPTKVDRS +Y++R  AK+IVA GLA RC +QV+YAIGV  PLS+ V+++GTGKI D +I++++K++FD RP  +  +LD +R     + KTAAYGHFGR+D +FTWE
Sbjct:  237 NPTGRFVIGGPQGDSGLTGRKIIVDTYGGMARHGGGAFSGKDPTKVDRSASYMLRYVAKNIVAAGLAERCEIQVAYAIGVANPLSINVNTFGTGKISDDKIIELIKKNFDLRPAAIIRDLDLRR---PIYRKTAAYGHFGREDAEFTWE 382          
BLAST of CF832324 vs. ExPASy Swiss-Prot
Match: METK_SYMTH (S-adenosylmethionine synthetase OS=Symbiobacterium thermophilum GN=metK PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.017e-42
Identity = 85/149 (57.05%), Postives = 107/149 (71.81%), Query Frame = -1
Query:  340 NPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDFKRGGNGRFLKTAAYGHFGRDDPDFTWE 786
            NP+GRFV+GGP GD GLTGRKII+DTY            GKDPTKVDRSGAY  R  AK+IVA GLAR+C VQV+YAIGV  P+S+ V ++GTGK+PD+ + ++V+E+FD RPG +  +LD +R     + + AAYGHFGR D D  WE
Sbjct:  239 NPTGRFVVGGPQGDTGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSGAYAARWVAKNIVAAGLARKCEVQVAYAIGVAHPVSILVTTFGTGKLPDERLAQLVRETFDLRPGAIIRDLDLRR---PIYRQVAAYGHFGRPDLDLPWE 384          
BLAST of CF832324 vs. ExPASy Swiss-Prot
Match: METK_DECAR (S-adenosylmethionine synthetase OS=Dechloromonas aromatica (strain RCB) GN=metK PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.328e-42
Identity = 86/149 (57.72%), Postives = 106/149 (71.14%), Query Frame = -1
Query:  340 NPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDFKRGGNGRFLKTAAYGHFGRDDPDFTWE 786
            NP+GRFV+GGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC+VQVSYAIGV EP S+ V++YGTGK+ ++ +  +V++ FD RP  +   LD  R     + KTAAYGHFGRD+P+FTWE
Sbjct:  228 NPTGRFVVGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYATRYVAKNIVAAGLASRCLVQVSYAIGVAEPTSIMVETYGTGKVSNETLTALVRKHFDLRPKGIVNMLDLLR---PIYQKTAAYGHFGRDEPEFTWE 373          
BLAST of CF832324 vs. ExPASy Swiss-Prot
Match: METK_THIDA (S-adenosylmethionine synthetase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=metK PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.734e-42
Identity = 86/150 (57.33%), Postives = 110/150 (73.33%), Query Frame = -1
Query:  337 NPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDFKRGGNGRFLKTAAYGHFGRDDPDFTWEV 786
            NP+GRFV+GGP GDAGLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA +C+VQVSYAIGV +P S+ VD++GTGKIP+ +I+++++  FD RP  +   LD  R     + +TA+YGHFGRD+P+FTWEV
Sbjct:  229 NPTGRFVVGGPMGDAGLTGRKIIVDTYGGASPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADKCMVQVSYAIGVAKPTSLMVDTFGTGKIPEAKIVELIQAHFDLRPKGIVNMLDLLR---PIYTRTASYGHFGRDEPEFTWEV 375          
BLAST of CF832324 vs. ExPASy Swiss-Prot
Match: METK_CHRVO (S-adenosylmethionine synthetase OS=Chromobacterium violaceum GN=metK PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.958e-42
Identity = 88/149 (59.06%), Postives = 109/149 (73.15%), Query Frame = -1
Query:  340 NPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDFKRGGNGRFLKTAAYGHFGRDDPDFTWE 786
            NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLAR+C +QVSYAIGV EP S+ VD++GT KIP+++I+++VK+ FD RP  +   LD  R   G   KTAAYGHFGR++P+F+WE
Sbjct:  230 NPTGRFVIGGPMGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLARQCQIQVSYAIGVAEPTSIAVDTFGTNKIPNEKIVELVKKHFDLRPKGIIQMLDLLRPIYG---KTAAYGHFGREEPEFSWE 375          
BLAST of CF832324 vs. ExPASy Swiss-Prot
Match: METK_COXBU (S-adenosylmethionine synthetase OS=Coxiella burnetii GN=metK PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.863e-42
Identity = 86/149 (57.72%), Postives = 105/149 (70.47%), Query Frame = -1
Query:  340 NPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDFKRGGNGRFLKTAAYGHFGRDDPDFTWE 786
            NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE FD RPG +   L+  R     +  TA YGHFGR++P+FTWE
Sbjct:  227 NPTGRFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of CF832324 vs. ExPASy Swiss-Prot
Match: METK_COXBR (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=metK PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.863e-42
Identity = 86/149 (57.72%), Postives = 105/149 (70.47%), Query Frame = -1
Query:  340 NPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDFKRGGNGRFLKTAAYGHFGRDDPDFTWE 786
            NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE FD RPG +   L+  R     +  TA YGHFGR++P+FTWE
Sbjct:  227 NPTGRFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
The following BLAST results are available for this feature:
BLAST of CF832324 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_OSTTA2.333e-5571.61S-adenosylmethionine synthetase OS=Ostreococcus ta... [more]
METK2_PEA2.579e-5476.98S-adenosylmethionine synthetase 2 OS=Pisum sativum... [more]
METK_DICDI8.885e-4763.87S-adenosylmethionine synthetase OS=Dictyostelium d... [more]
METK_SYNWW1.201e-4357.72S-adenosylmethionine synthetase OS=Syntrophomonas ... [more]
METK_SYMTH1.017e-4257.05S-adenosylmethionine synthetase OS=Symbiobacterium... [more]
METK_DECAR1.328e-4257.72S-adenosylmethionine synthetase OS=Dechloromonas a... [more]
METK_THIDA1.734e-4257.33S-adenosylmethionine synthetase OS=Thiobacillus de... [more]
METK_CHRVO2.958e-4259.06S-adenosylmethionine synthetase OS=Chromobacterium... [more]
METK_COXBU3.863e-4257.72S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXBR3.863e-4257.72S-adenosylmethionine synthetase OS=Coxiella burnet... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01K23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01K23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832324 ID=CF832324; Name=CF832324; organism=Citrus sinensis; type=EST; length=786bp
TTTTTTTTTTTTTTTTTAAGCAAAAGGACGAATTTTACTAATTCCAGGCA
CCAGTTGAGCAAAATTCTCAATCGATATCACTACACAACAGTGGTGACAT
GGTACATTAAACCAAAACCAAAAAAGAAGTGGGGAAAAAAAAAAAAGAAA
GGAATTGAATGGGGAACATGTATGAGTTCTGAACACAGGAAATTTGCTTA
GTATTACAAAGCAGCAGCAAGATAATATTCAAATTATTCATCCACTACCA
ATAAAAGCAAACTTGAACAGCAGGGATAGTTTTCACTTTTCAACTCAAAT
TTAAGCTTGAGGCTTTTCCCACTTGAGGGGCTTCACAACTTCCCAAGTGA
AGTCTGGGTCATCCCTGCCAAAGTGTCCATAGGCAGCAGTCTTCAAAAAC
CTGCCATTACCGCCCCTTTTGAAATCCAAATTGATGGTCATCATTCCTGG
CCTGAAATCAAAGCTTTCCTTCACAATTTTGAGGATCTCCTTGTCAGGAA
TCTTGCCGGTTCCATATGAGTCCACAAAAACAGACAATGGCTCAGGCACA
CCAATGGCATAGGAGACTTGGACAATGCACCTGCGAGCAAGCCCGTTTGC
AACAATGCTCTTAGCAGCCTGCCTAACAATGTATGCACCACTCCTATCCA
CCTTAGTAGGGTCTTTTCCAGAAAAAGCACCGCCACCATGGGCTCCCCAG
CCACCATAAGTGTCGATGATGATCTTACGTCCAGTGAGACCAGCATCACC
ATGAGGCCCACCAATGACAAAACGACCTGATGGATT
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