CF832325

Overview
NameCF832325
Unique NameCF832325
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832325 vs. ExPASy Swiss-Prot
Match: METK_TRIEI (S-adenosylmethionine synthetase OS=Trichodesmium erythraeum (strain IMS101) GN=metK PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.091e-49
Identity = 103/201 (51.24%), Postives = 134/201 (66.67%), Query Frame = 3
Query:   96 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP-------EDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQH 677
            +LFTSESV EGHPDK+CDQISD ++DA L QDP+S+VA E    T +V++ GEITTKA+V+Y ++ R     IG+V  + G  AD C VLV +++QS DIAQGV      R        + +GAGDQG MFG+A +ETPE MPL   LA ++  +LT VRK     +LRPDGK+QVT+ Y +      PV + T+LISTQH
Sbjct:    5 YLFTSESVTEGHPDKICDQISDTIIDAILAQDPQSRVAAEVVVNTGLVLITGEITTKAQVNYIELARKKIADIGYVHAENGFSADSCSVLVALDEQSADIAQGVDKAQETRELLSEEELDAVGAGDQGLMFGFACNETPELMPLPISLAHRVCRQLTAVRKTGQLPYLRPDGKSQVTITYEDGR----PVGIDTILISTQH 201          
BLAST of CF832325 vs. ExPASy Swiss-Prot
Match: METK_THICR (S-adenosylmethionine synthetase OS=Thiomicrospira crunogena (strain XCL-2) GN=metK PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.091e-49
Identity = 104/206 (50.49%), Postives = 136/206 (66.02%), Query Frame = 3
Query:   87 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 704
            M T +FTSESV+EGHPDK+ DQISDA+LDA ++QDP+++VACET  KT MVM+ GEITT A VD E++VR     IG+   D+G D + C VL +I +QSP+IAQGV  +      + GAGDQG MFGYA++ET   MP     A +L  +  E+RK     WLRPD K+QVT+ Y +      PV V  V++STQH   V N ++
Sbjct:    1 MTTTVFTSESVSEGHPDKIADQISDAMLDAIMKQDPKARVACETFVKTGMVMLGGEITTSAWVDQEELVRQVVNDIGYNHGDLGFDGETCAVLSSIGKQSPEIAQGVDEY---EDHEQGAGDQGLMFGYASNETDVLMPAPIYFAHRLMEKQAELRKAGKLDWLRPDAKSQVTLRYEDGQ----PVAVDAVVLSTQHSPEVDNKDL 199          
BLAST of CF832325 vs. ExPASy Swiss-Prot
Match: METK_POLSQ (S-adenosylmethionine synthetase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=metK PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.091e-49
Identity = 102/203 (50.25%), Postives = 139/203 (68.47%), Query Frame = 3
Query:   96 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 704
            + FTSESV+EGHPDK+ DQISDA+LDA L QDP ++VA ET   T +V++ GEITT A VDY ++ R+T R IG+ + D G+D   C VLV  ++QSPDIAQGV         D GAGDQG MFGYA DET E MP+   L+ +L  R +++R++   +WLRPD K+QVT+ Y +      P  + TV++STQHDE ++ +++
Sbjct:    5 YFFTSESVSEGHPDKVADQISDAILDAILAQDPTARVAAETLCNTGLVVLAGEITTHANVDYIQVARNTLREIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDKAHDD-GLDQGAGDQGLMFGYACDETSELMPMPIHLSHRLVERQSQLRRDGRLNWLRPDAKSQVTLRYVDGK----PDSIDTVVLSTQHDEEISLEKL 202          
BLAST of CF832325 vs. ExPASy Swiss-Prot
Match: METK_POLSJ (S-adenosylmethionine synthetase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=metK PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.091e-49
Identity = 104/194 (53.61%), Postives = 133/194 (68.56%), Query Frame = 3
Query:   96 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQH 677
            FLFTSESV+EGHPDK+ DQISDA+LDA  +QDP S+VA ET T T +V++ GEITT A VDY ++ RDT + IG+ + + G+D   C VLV  ++QS DIAQGV  H +    +IGAGDQG MFGYA DETPE MP     A +L  R  ++RK+    +LRPD K+QVT+ Y N      P  + TV++STQH
Sbjct:    5 FLFTSESVSEGHPDKVADQISDAILDAIFKQDPRSRVAAETLTNTGLVVLAGEITTNAHVDYIQVARDTIKRIGYDNTEYGIDYKGCAVLVAYDKQSNDIAQGV-DHASDDHLNIGAGDQGLMFGYACDETPELMPAPIYYAHRLMERQAQLRKDGRLPFLRPDAKSQVTMRYVNGK----PHSIDTVVLSTQH 193          
BLAST of CF832325 vs. ExPASy Swiss-Prot
Match: METK_POLNS (S-adenosylmethionine synthetase OS=Polynucleobacter necessarius (strain STIR1) GN=metK PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.091e-49
Identity = 102/203 (50.25%), Postives = 139/203 (68.47%), Query Frame = 3
Query:   96 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 704
            + FTSESV+EGHPDK+ DQISD++LDA L QDP ++VA ET   T +V++ GEITT A VDY ++ R+T R IG+ + D G+D   C VLV  ++QSPDIAQGV         D GAGDQG MFGYA DET E MPL   L+ +L  R +++R++   +WLRPD K+QVT+ Y +      P  + TV++STQHDE ++ +++
Sbjct:    5 YFFTSESVSEGHPDKVADQISDSILDAILAQDPTARVAAETLCNTGLVVLAGEITTNANVDYIQVARNTLREIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDKAHDD-GLDQGAGDQGLMFGYACDETAELMPLPIHLSHRLVERQSQLRRDGRLNWLRPDAKSQVTLRYVDGK----PDSIDTVVLSTQHDEDISLEKL 202          
BLAST of CF832325 vs. ExPASy Swiss-Prot
Match: METK_BUCAP (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=metK PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.091e-49
Identity = 103/204 (50.49%), Postives = 137/204 (67.16%), Query Frame = 3
Query:   87 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTND 698
            M  +LFTSESV+EGHPDK+ DQISDA+LD  ++QD +++VACET  KT MV++ GEITT A VD E+I R+T  +IG+++ + G DA+ C VL  I +QSPDI QGV       P + GAGDQG +FGYAT+ET   MP     A  L  + +E+RK +   WLRPD K+QVT +Y N       + + TV+ STQH E++T D
Sbjct:    1 MTEYLFTSESVSEGHPDKIADQISDALLDEIIKQDLKARVACETYVKTGMVLIGGEITTTAWVDVEEITRNTINNIGYINSETGFDANSCAVLSTIGKQSPDITQGVD---RCNPLEQGAGDQGIIFGYATNETEVLMPAPITYAHLLVKKQSELRKKNILHWLRPDAKSQVTFKYKNGR----IIGIDTVVFSTQHKESITQD 197          
BLAST of CF832325 vs. ExPASy Swiss-Prot
Match: METK_WIGBR (S-adenosylmethionine synthetase OS=Wigglesworthia glossinidia brevipalpis GN=metK PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.731e-49
Identity = 100/206 (48.54%), Postives = 139/206 (67.48%), Query Frame = 3
Query:   87 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 704
            M  +LFTSESV+EGHPDK+ DQISD +LDA L QD +++VACET  KT MV+V GE+ + AK+D E+++R+T + IG+++ ++G DA+ C +L NI +QS DI +G++      P   GAGDQG +FGYAT+ET  FMP     A KL  R +EVRK +   WLRPD K+Q+T  Y N       V + TV+IS+QH E +   ++
Sbjct:    1 MNQYLFTSESVSEGHPDKIADQISDTILDAILTQDKKARVACETYIKTGMVLVGGEVNSYAKIDIEELIRNTIKDIGYINSNMGFDANSCAILNNISKQSKDIEKGLN---QLDPYMQGAGDQGIIFGYATNETETFMPAPITYANKLMIRQSEVRKKNILPWLRPDAKSQITFIYENKK----IVGIDTVIISSQHSEEINLSDL 199          
BLAST of CF832325 vs. ExPASy Swiss-Prot
Match: METK_PSYWF (S-adenosylmethionine synthetase OS=Psychrobacter sp. (strain PRwf-1) GN=metK PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.731e-49
Identity = 101/202 (50.00%), Postives = 135/202 (66.83%), Query Frame = 3
Query:   99 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 704
            LFTSESV+EGHPDK+ DQISDA+LDA + +D  ++VACET  KT  V++ GEI+T A +D E+IVRDT  SIG+   D+G D + C V+  I +QSP+IAQGV       PED GAGDQG MFGYA++ET   MP     A +L  R +E+R++    WLRPD K QVT++Y N      P  +  V++STQHD  ++  ++
Sbjct:    6 LFTSESVSEGHPDKMADQISDALLDAIMREDLHARVACETLVKTGAVVLAGEISTTANIDIERIVRDTVNSIGYNHSDLGFDGETCAVINMIGKQSPEIAQGVD---RMNPEDQGAGDQGLMFGYASNETEVLMPAPIEFAHRLMERQSELRRSGELKWLRPDAKAQVTLKYTNG----TPSAIDAVVLSTQHDPDISQADL 200          
BLAST of CF832325 vs. ExPASy Swiss-Prot
Match: METK_MYCGI (S-adenosylmethionine synthetase OS=Mycobacterium gilvum (strain PYR-GCK) GN=metK PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.731e-49
Identity = 114/213 (53.52%), Postives = 135/213 (63.38%), Query Frame = 3
Query:   90 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAK---VDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH-GHFTK-----RPEDI-GAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTND 698
            E  LFTSESV EGHPDK+CD ISD+VLDA L  DP+S+VA ET   T  V V GE+TT AK    D    VR+    IG+   D G D + C V + I +QSPDIAQGV   H T+      P D  GAGDQG MFGYA  +TPE MPL   LA +L  +LTEVRKN T  +LRPDGKTQVTV+Y        PVR+ TV++STQH + +  D
Sbjct:    3 EARLFTSESVTEGHPDKICDAISDSVLDALLAGDPKSRVAVETLVTTGQVHVVGEVTTNAKEAFADITNTVRERILEIGYDHSDKGFDGETCGVNIGIGRQSPDIAQGVDTAHETRVGGAADPLDSQGAGDQGLMFGYAIADTPELMPLPIALAHRLSRKLTEVRKNGTLDYLRPDGKTQVTVQY----DGTTPVRLDTVVLSTQHADGIELD 211          
BLAST of CF832325 vs. ExPASy Swiss-Prot
Match: METK_CORJK (S-adenosylmethionine synthetase OS=Corynebacterium jeikeium (strain K411) GN=metK PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.731e-49
Identity = 111/216 (51.39%), Postives = 134/216 (62.04%), Query Frame = 3
Query:   87 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED------------IGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTND 698
            M   LF+SESV EGHPDK+CD ISD +LDA + +DPE++VA ET   T +V V GEI T   V+   +VR T   IGF S D+G D   C V V I +QS +IAQGV      R  D            +GAGDQG MFGYAT+ETPE+MPL   LA +L  RLTEVRK      LRPDGKTQVT   Y+  GA  PVR+ TV++STQHD  +  +
Sbjct:    1 MSLRLFSSESVTEGHPDKICDAISDKILDALIAKDPEARVAVETVVTTGLVHVVGEIRTTTYVEIPALVRKTLLEIGFNSSDMGFDGSTCGVSVAIGEQSQEIAQGVDTALEHRSHDAEGGAELDEIDRLGAGDQGLMFGYATNETPEYMPLPIALAHRLSRRLTEVRKKGIVPHLRPDGKTQVTFA-YDAEGA--PVRLDTVVVSTQHDAGIEQE 213          
The following BLAST results are available for this feature:
BLAST of CF832325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_TRIEI2.091e-4951.24S-adenosylmethionine synthetase OS=Trichodesmium e... [more]
METK_THICR2.091e-4950.49S-adenosylmethionine synthetase OS=Thiomicrospira ... [more]
METK_POLSQ2.091e-4950.25S-adenosylmethionine synthetase OS=Polynucleobacte... [more]
METK_POLSJ2.091e-4953.61S-adenosylmethionine synthetase OS=Polaromonas sp.... [more]
METK_POLNS2.091e-4950.25S-adenosylmethionine synthetase OS=Polynucleobacte... [more]
METK_BUCAP2.091e-4950.49S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_WIGBR2.731e-4948.54S-adenosylmethionine synthetase OS=Wigglesworthia ... [more]
METK_PSYWF2.731e-4950.00S-adenosylmethionine synthetase OS=Psychrobacter s... [more]
METK_MYCGI2.731e-4953.52S-adenosylmethionine synthetase OS=Mycobacterium g... [more]
METK_CORJK2.731e-4951.39S-adenosylmethionine synthetase OS=Corynebacterium... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01K23_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01K23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832325 ID=CF832325; Name=CF832325; organism=Citrus sinensis; type=EST; length=709bp
TTGAGTTCCGCTCTTTTATTGAGGTCTGGTCTTAAGTCTGAATCTTAGAT
CTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGATGGAGACCTTTCT
ATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGACAAGTTGTGCGACC
AGATCTCTGATGCGGTGCTTGATGCCTGCCTTGAGCAGGATCCTGAGAGC
AAGGTTGCCTGTGAGACATGCACCAAGACCAACATGGTCATGGTCTTTGG
AGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCGCGACA
CTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTTGATGCCGAT
CACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCTGATATTGCCCA
GGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTGGTGCTGGTG
ACCAGGGCCATATGTTTGGTTATGCTACTGATGAGACCCCTGAATTTATG
CCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACGGAGGT
TAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCAGG
TCACTGTTGAGTACTACAATGACAATGGTGCCATGGTCCCAGTCCGTGTC
CACACGGTCCTCATTTCAACCCAGCATGATGAGACTGTCACAAATGATGA
AATTGCTGC
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