CF832326

Overview
NameCF832326
Unique NameCF832326
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME16_ARATH (Probable pectinesterase/pectinesterase inhibitor 16 OS=Arabidopsis thaliana GN=PME16 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 8.974e-59
Identity = 114/201 (56.72%), Postives = 134/201 (66.67%), Query Frame = -1
Query:  259 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 861
            VG+D S  +RC +  +QD+LY HS RQFY    I GTVDFIFGN+A VFQ+C+I AR+P P QRN VTAQGR +P QNTGI IQ CRI A S          TYLGRPWK YSRTVVMQS I   I+P+GW  WSG F L +LFY EY N+G G+  S RVKWS      +  EA+ +T A+FI G+ WL STG  F  GL
Sbjct:  325 VGADKSVVHRCSVEGYQDSLYTHSKRQFYRETDITGTVDFIFGNSAVVFQSCNIAARKPLPGQRNFVTAQGRSNPGQNTGIAIQNCRITAES---------MTYLGRPWKEYSRTVVMQSFIGGSIHPSGWSPWSGGFGLKSLFYGEYGNSGPGSSVSGRVKWSGCHPSLTVTEAEKFTVASFIDGNIWLPSTGVSFDPGL 516          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.531e-58
Identity = 108/198 (54.55%), Postives = 133/198 (67.17%), Query Frame = -1
Query:  268 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFS 861
            V +DLS FY+C M AFQDT+Y H+ RQFY  C+I GTVDFIFGNAA VFQ C+I  RRP   Q+N +TAQGR DPNQNTGI I  C I    +L  +    +T+LGRPWK +S TV+M+S +   INP GW  W+G+ A DT+FYAEY N+G GA T NRVKW   K   +  EA  +T   FI G+ WL +T  PF+
Sbjct:  368 VSADLSVFYKCTMDAFQDTMYAHAQRQFYRDCVILGTVDFIFGNAAVVFQKCEILPRRPMKGQQNTITAQGRKDPNQNTGISIHNCTIKPLDNLTDI----QTFLGRPWKDFSTTVIMKSFMDKFINPKGWLPWTGDTAPDTIFYAEYLNSGPGASTKNRVKWQGLKTSLTKKEANKFTVKPFIDGNNWLPATKVPFN 561          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME13_ARATH (Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana GN=PME13 PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.296e-57
Identity = 107/202 (52.97%), Postives = 139/202 (68.81%), Query Frame = -1
Query:  259 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW-SGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 861
            V SD S F  C    +QDTLY ++ RQ+Y SC+I GT+DFIFG+AAA+FQNC+I  R+  P Q+N VTAQGR D  Q TG V+  C+I A  DL  VK  +++YLGRPWK YSRT++M+S I +VI+P GW  W   +FA+DTL+YAEY N G+  DT++RVKW  FKVI +  EA  YT   F+ G  W+ ++G P  LGL
Sbjct:  412 VQSDRSIFLNCRFEGYQDTLYAYTHRQYYRSCVIVGTIDFIFGDAAAIFQNCNIFIRKGLPGQKNTVTAQGRVDKFQTTGFVVHNCKIAANEDLKPVKEEYKSYLGRPWKNYSRTIIMESKIENVIDPVGWLRWQETDFAIDTLYYAEYNNKGSSGDTTSRVKWPGFKVI-NKEEALNYTVGPFLQGD-WISASGSPVKLGL 611          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME24_ARATH (Putative pectinesterase/pectinesterase inhibitor 24 OS=Arabidopsis thaliana GN=PME24 PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.433e-56
Identity = 109/201 (54.23%), Postives = 132/201 (65.67%), Query Frame = -1
Query:  259 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 861
            V +DL+AFYRC M A+QDTLYVH+ RQFY  C I GTVDFIFGN+A+V Q+C I  RRP   Q+N +TAQGR DPN NTGI I +C I    DL  V     T+LGRPWK +S TV+M S +   I+  GW  W+G+ A DT+FY EY+NTG GA T NRVKW   + + S  EA  +T   FI G  WL +T  PF  GL
Sbjct:  366 VSADLTAFYRCTMNAYQDTLYVHAQRQFYRECTIIGTVDFIFGNSASVLQSCRILPRRPMKGQQNTITAQGRTDPNMNTGISIHRCNISPLGDLTDVM----TFLGRPWKNFSTTVIMDSYLHGFIDRKGWLPWTGDSAPDTIFYGEYKNTGPGASTKNRVKWKGLRFL-STKEANRFTVKPFIDGGRWLPATKVPFRSGL 561          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 3.192e-56
Identity = 101/199 (50.75%), Postives = 134/199 (67.34%), Query Frame = -1
Query:  259 SDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 855
            SD S FY C    +QDTLY+HS RQF  +C I GTVDFIFG+A A+ QNC+I+AR+P   Q+N +TAQ R +P++ TG VIQ   +   S         ETYLGRPW+ +SRTV M+ ++  +++PAGW  WSG+FAL TL+Y EY NTGAGA  S RVKW  + VI +  EA+ +T  NF+ G+ W+ +TG P + GL
Sbjct:  365 SDFSVFYACSFKGYQDTLYLHSSRQFLRNCNIYGTVDFIFGDATAILQNCNIYARKPMSGQKNTITAQSRKEPDETTGFVIQSSTVATAS---------ETYLGRPWRSHSRTVFMKCNLGALVSPAGWLPWSGSFALSTLYYGEYGNTGAGASVSGRVKWPGYHVIKTVTEAEKFTVENFLDGNYWITATGVPVNDGL 554          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME22_ARATH (Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana GN=PME22 PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.213e-55
Identity = 109/201 (54.23%), Postives = 130/201 (64.68%), Query Frame = -1
Query:  259 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 861
            V SD SAFYRC +  +QDTLY HSLRQFY  C I GT+DFIFGN AAV QNC I+ R P P Q+  +TAQGR  PNQNTG VIQ   + AT           TYLGRPWK YSRTV M + +S ++ P GW EW GNFALDTL+Y EY N G G  +S RVKW  + ++     A ++T  +FI G  WL +TG  F+ GL
Sbjct:  351 VDSDQSAFYRCSVEGYQDTLYAHSLRQFYRDCEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPNQNTGFVIQNSYVLATQ---------PTYLGRPWKLYSRTVYMNTYMSQLVQPRGWLEWFGNFALDTLWYGEYNNIGPGWRSSGRVKWPGYHIMDKRT-ALSFTVGSFIDGRRWLPATGVTFTAGL 541          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.069e-55
Identity = 107/197 (54.31%), Postives = 128/197 (64.97%), Query Frame = -1
Query:  271 GSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNF-ALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPF 858
            GSD S F+RC    FQDTLY HS RQFY  C I GT+DFIFGNAA VFQ+C I  R+P PNQ N +TAQG+ DPNQNTGI+IQK  I    + L       TYLGRPWK +S TV+MQSDI  ++NP GW  W  N     T+FYAEYQN+G GAD S RVKW+ +K   +   A+ +T  +FI G  WL +    F
Sbjct:  385 GSDRSVFFRCSFDGFQDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQSCKIMPRQPLPNQFNTITAQGKKDPNQNTGIIIQKSTITPFGNNLTA----PTYLGRPWKDFSTTVIMQSDIGALLNPVGWMSWVPNVEPPTTIFYAEYQNSGPGADVSQRVKWAGYKPTITDRNAEEFTVQSFIQGPEWLPNAAVQF 577          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.609e-55
Identity = 109/201 (54.23%), Postives = 135/201 (67.16%), Query Frame = -1
Query:  259 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 861
            VGSD S  YRC +  +QD+LY  S RQFY    I GTVDFIFGN+A VFQ+C++ +R+ + +Q N VTAQGR DPNQNTGI I  CRI          GS +TYLGRPWK+YSRTVVMQS I   I+P+GW  WS NFAL TL+Y E+ N+G G+  S RV W+ +    +  EAQ +T + FI G++WL STG  F  GL
Sbjct:  338 VGSDRSVVYRCSIDGYQDSLYTLSKRQFYRETDITGTVDFIFGNSAVVFQSCNLVSRKGSSDQ-NYVTAQGRSDPNQNTGISIHNCRI---------TGSTKTYLGRPWKQYSRTVVMQSFIDGSIHPSGWSPWSSNFALKTLYYGEFGNSGPGSSVSGRVSWAGYHPALTLTEAQGFTVSGFIDGNSWLPSTGVVFDSGL 528          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2)

HSP 1 Score: 214.542 bits (545), Expect = 6.020e-55
Identity = 100/201 (49.75%), Postives = 130/201 (64.68%), Query Frame = -1
Query:  259 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 861
            V SD S F+ C    +QDTLY HS RQF+  C I+GT+DF+FG+AAAVFQNC +  R+P PNQ   +TA GR DP ++TG V Q C I    D LAVK + + YLGRPWK YSRT++M + I D + P GW  W G+F L TLFY+E QNTG G+  +NRV W+  K + S  +   +T A +I G  W+   G P++ GL
Sbjct:  366 VQSDESIFFNCRFDGYQDTLYTHSHRQFFRDCTISGTIDFLFGDAAAVFQNCTLLVRKPLPNQACPITAHGRKDPRESTGFVFQGCTIAGEPDYLAVKETSKAYLGRPWKEYSRTIIMNTFIPDFVQPQGWQPWLGDFGLKTLFYSEVQNTGPGSALANRVTWAGIKTL-SEEDILKFTPAQYIQGDDWIPGKGVPYTTGL 565          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME45_ARATH (Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.341e-54
Identity = 107/202 (52.97%), Postives = 133/202 (65.84%), Query Frame = -1
Query:  259 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW-SGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 861
            V SD S F  C    +QDTLY ++ RQ+Y SC+I GTVDFIFG+AAA+FQNCDI  R+  P Q+N VTAQGR D  Q TG VI  C +    DL  VK  F++YLGRPWK +SRTVVM+S I DVI+P GW  W   +FA+DTL YAEY+N G    T+ RVKW  F+V+ +  EA  +T   F+ G  W+ + G P  LGL
Sbjct:  407 VQSDRSVFLNCRFEGYQDTLYAYTHRQYYRSCVIIGTVDFIFGDAAAIFQNCDIFIRKGLPGQKNTVTAQGRVDKFQTTGFVIHNCTVAPNEDLKPVKAQFKSYLGRPWKPHSRTVVMESTIEDVIDPVGWLRWQETDFAIDTLSYAEYKNDGPSGATAARVKWPGFRVL-NKEEAMKFTVGPFLQGE-WIQAIGSPVKLGL 606          
The following BLAST results are available for this feature:
BLAST of CF832326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
PME16_ARATH8.974e-5956.72Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME46_ARATH1.531e-5854.55Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME13_ARATH1.296e-5752.97Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME24_ARATH1.433e-5654.23Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME6_ARATH3.192e-5650.75Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME22_ARATH1.213e-5554.23Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME3_PHAVU2.069e-5554.31Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]
PME35_ARATH4.609e-5554.23Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME21_ARATH6.020e-5549.75Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME45_ARATH1.341e-5452.97Putative pectinesterase/pectinesterase inhibitor 4... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01L01_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01L01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832326 ID=CF832326; Name=CF832326; organism=Citrus sinensis; type=EST; length=861bp
TTTTTTTTTTTTTTAAGCTCAATCAGCAGTAGTACTTTAATTTTAGGGAG
CAACGCATGCAATCATCATCCATAATTCCCTGCTGAGATAAATCTCTTAC
ATCAAACTCGAGCAGACTCACACAAATAAAATCATCAAACTTGAGCAGAC
TCGCACAAATAAAATCATCAAACATCTAGCGGAGCAAGTGTTATTTATTG
CTAGCTAGGACATTTATAGGCAGCTGAGCTTAGCTATGGCCTATGTATGA
CAAATTCACAGACCAAGAGAGAAAGGAAACCCAGTGGAGCCAAGCCAAGT
ACTCCCTGCAATAAAATTCGCAGCTGTATAAGTTTGAGCCTCAGCTGCAC
TAGTAATCACCTTGAATGTGCTCCATTTCACCCTATTCGATGTGTCAGCA
CCAGCACCTGTGTTTTGATACTCTGCATAAAACAATGTGTCCAATGCAAA
ATTCCCACTCCATTCATACCACCCAGCTGGGTTAATAACATCACTTATAT
CAGATTGCATCACAACAGTCCTCGAGTACCGCTTCCATGGCCTGCCTAAA
TATGTCTCAAAGCTGCCCTTTACAGCAAGTAAATCTGATGTTGCACCAAT
CCTGCATTTTTGTATCACTATGCCTGTGTTCTGATTCGGGTCGTCGCGGC
CTTGTGCCGTGACCATGTTCCTTTGGTTTGGATTGGGGCGGCGAGCATGG
ATGTCACAGTTTTGGAACACAGCTGCTGCATTTCCGAAAATGAAGTCCAC
TGTGCCTGCTATAATGCAGCTGGTATAAAATTGGCGAAGTGAGTGTACAT
AGAGAGTGTCTTGGAATGCTAGCATGTCACACCTATAGAATGCTGATAAA
TCTGATCCTAC
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