CF832326

Overview
NameCF832326
Unique NameCF832326
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME60_ARATH (Probable pectinesterase/pectinesterase inhibitor 60 OS=Arabidopsis thaliana GN=PME60 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.987e-54
Identity = 105/198 (53.03%), Postives = 130/198 (65.66%), Query Frame = -1
Query:  268 SDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWS--GNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFS 855
            SDLS FYRC +  +QDTL VHS RQFY  C I GTVDFIFGNAA VFQNC I  R P   Q N++TAQGR D  QNTGI I    I    DL  V  S +TY+GRPW  YSRTVV+++ I  V++P GW  W+    + LDTLFYAEY+N G  + T  RV+W  F V++ A++A  ++   FIAG+ WL  +G PF+
Sbjct:  340 SDLSIFYRCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAVVFQNCIILPRLPLKGQANVITAQGRTDLFQNTGISIHNSIIIPAPDLKPVVRSVKTYMGRPWMMYSRTVVLKTYIDSVVSPVGWSPWTKGSTYGLDTLFYAEYKNIGPASSTRWRVRWKGFHVLSKASDASAFSVGKFIAGTAWLPGSGIPFT 537          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.987e-54
Identity = 102/199 (51.26%), Postives = 127/199 (63.82%), Query Frame = -1
Query:  259 SDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 855
            +D S FY C    +QDTLY HS RQFY  C I+GT+DF+FG+AAAVFQNC +  R+P  NQ   +TA GR DP ++TG V+Q C I    D LAVK   +TYLGRPWK YSRT++M + I D + P GW  W G F L+TLFY+E QNTG GA  + RV W   K + S  E   +T A +I G  W+   G P+ LGL
Sbjct:  365 ADESIFYNCKFDGYQDTLYAHSHRQFYRDCTISGTIDFLFGDAAAVFQNCTLLVRKPLLNQACPITAHGRKDPRESTGFVLQGCTIVGEPDYLAVKEQSKTYLGRPWKEYSRTIIMNTFIPDFVPPEGWQPWLGEFGLNTLFYSEVQNTGPGAAITKRVTWPGIKKL-SDEEILKFTPAQYIQGDAWIPGKGVPYILGL 562          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.902e-54
Identity = 99/201 (49.25%), Postives = 133/201 (66.17%), Query Frame = -1
Query:  259 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 861
            V +D  A YRC +  +QDTLY HS RQFY  C I GT+D+IFGNAA VFQ C+I ++ P P Q  ++TAQ RD  +++TGI +Q C I A+ DL       ++YLGRPW+ +SRTVVM+S I + I+ +GW +W+G  ALDTL+Y EY N G G++T  RV W  F ++    +A  +TA  FI G  WLGST FP+  G+
Sbjct:  348 VNADFVALYRCVIDGYQDTLYTHSFRQFYRECDIYGTIDYIFGNAAVVFQGCNIVSKLPMPGQFTVITAQSRDTQDEDTGISMQNCSILASEDLFNSSNKVKSYLGRPWREFSRTVVMESYIDEFIDGSGWSKWNGGEALDTLYYGEYNNNGPGSETVKRVNWPGFHIM-GYEDAFNFTATEFITGDGWLGSTSFPYDNGI 547          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME58_ARATH (Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.135e-53
Identity = 95/197 (48.22%), Postives = 133/197 (67.51%), Query Frame = -1
Query:  271 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPF 861
            V +DL+ FY C +  +QDTLYVHS RQF+  C ++GTVDFIFG+   V QNC+I  R+P  +Q  M+TAQGR D  ++TG+V+Q C I      + VK   + YLGRPWK +SRT++M + I DVI+PAGW  W+G+FAL+TL+YAEY+N G G++ + RVKW   K + S  +A  +T A F+ G+ W+     P+
Sbjct:  371 VSADLAVFYNCQIDGYQDTLYVHSHRQFFRDCTVSGTVDFIFGDGIVVLQNCNIVVRKPMKSQSCMITAQGRSDKRESTGLVLQNCHITGEPAYIPVKSINKAYLGRPWKEFSRTIIMGTTIDDVIDPAGWLPWNGDFALNTLYYAEYENNGPGSNQAQRVKWPGIKKL-SPKQALRFTPARFLRGNLWIPPNRVPY 566          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME43_ARATH (Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=PME43 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.483e-53
Identity = 95/198 (47.98%), Postives = 133/198 (67.17%), Query Frame = -1
Query:  268 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFS 861
            V +D + F+ C M  +QDTLYVH+ RQFY +C ++GT+DF+FG+A AVFQNC+   RRP  +Q+ +VTAQGR D  + TGIVI   RI   +  L VK     +LGRPWK +SRT++M ++I DVI+P GW +W+  FAL+TLFY EY+N G G+    RV+W   K I+  A A+ +   NF+ G+TW+  T  P++
Sbjct:  503 VSADFAVFFNCHMNGYQDTLYVHTHRQFYRNCRVSGTIDFVFGDAKAVFQNCEFVIRRPMEHQQCIVTAQGRKDRRETTGIVIHNSRITGDASYLPVKAKNRAFLGRPWKEFSRTIIMNTEIDDVIDPEGWLKWNETFALNTLFYTEYRNRGRGSGQGRRVRWRGIKRISDRA-AREFAPGNFLRGNTWIPQTRIPYN 699          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME23_ARATH (Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana GN=PME23 PE=2 SV=3)

HSP 1 Score: 208.764 bits (530), Expect = 3.303e-53
Identity = 96/198 (48.48%), Postives = 131/198 (66.16%), Query Frame = -1
Query:  268 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFS 861
            V +D + F+ C +   QDTLYVHS RQFY  C ++GTVDFIFG+A  + QNC I  R+PN  Q  MVTAQGR +  ++TG+V+  C I      + +K   + YLGRPWK +SRT++M++ I DVI+PAGW  WSG+FAL TL+YAE+ NTG G++ + RVKW   K +T   +A  YT   F+ G TW+  T  P++
Sbjct:  369 VSADYAVFHSCQIDGHQDTLYVHSHRQFYRDCTVSGTVDFIFGDAKCILQNCKIVVRKPNKGQTCMVTAQGRSNVRESTGLVLHGCHITGDPAYIPMKSVNKAYLGRPWKEFSRTIIMKTTIDDVIDPAGWLPWSGDFALKTLYYAEHMNTGPGSNQAQRVKWPGIKKLT-PQDALLYTGDRFLRGDTWIPQTQVPYT 565          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 9.610e-53
Identity = 106/200 (53.00%), Postives = 132/200 (66.00%), Query Frame = -1
Query:  259 SDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRI-GATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 855
            SD+S FYRC +  +QDTLYVHS RQF+  C I GTVDFIFGNAAAV QNC I AR P PN  N +TAQ R +PNQ TGIVI    + GA    L   G  +TYLGRPW+ Y+RTVV+ + +  +I P GW +W    AL TL+Y EYQN+G G+ T NRV W+ F VI+   EA+ +T   FI  ++WL  T  PF++ L
Sbjct:  279 SDMSVFYRCSIEGYQDTLYVHSGRQFFRECDIYGTVDFIFGNAAAVLQNCRIFARNP-PNGVNTITAQSRFNPNQTTGIVIHNSVVKGAPGVQL---GGVKTYLGRPWRSYARTVVIGTYLDTLIEPNGWIDWDNVTALSTLYYGEYQNSGPGSGTENRVDWAGFHVISDIQEAREFTLPKFIDSASWLPPTKVPFTINL 474          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.255e-52
Identity = 102/201 (50.75%), Postives = 125/201 (62.19%), Query Frame = -1
Query:  259 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 861
            V  D+S  YRC +  +QD LY H  RQFY  C I GTVDFI GNAAAVFQ C I AR+PN  Q N +TAQ R+  +  +G  IQ C I A+SDL     + +TYLGRPW+ +S   V+QS I D+++PAGW  W G   L TL Y EYQN G GA TS RVKWS FKV+    +A  +T A  + G TWL  +  P+  GL
Sbjct:  326 VSGDMSVIYRCRVEGYQDALYPHIDRQFYRECFITGTVDFICGNAAAVFQFCQIVARQPNMGQSNFITAQSRETKDDKSGFSIQNCNITASSDLDTA--TVKTYLGRPWRIFSTVAVLQSFIGDLVDPAGWTPWEGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKQATEFTVAKLLDGETWLKESRIPYKSGL 524          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.255e-52
Identity = 104/201 (51.74%), Postives = 125/201 (62.19%), Query Frame = -1
Query:  259 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 861
            V  D+S  YRC +  +QD LY HS RQFY  C I GTVDFI GNA AVFQ C I AR+P   Q N++TAQ R   +  +G  IQKC I A+SDL     + +TYLGRPW+ +S   VMQS I D+++PAGW  W G   L TL Y EYQN G GA TS RVKWS FKV+    +A  +T A  + G TWL  T  P+  GL
Sbjct:  326 VSGDMSVIYRCRVEGYQDALYPHSDRQFYRECFITGTVDFICGNAVAVFQFCQIVARQPKMGQSNVITAQSRAFKDIYSGFTIQKCNITASSDLDTT--TVKTYLGRPWRIFSTVAVMQSFIGDLVDPAGWTPWEGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKQATEFTVAKLLDGETWLKETRIPYESGL 524          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME30_ARATH (Probable pectinesterase 30 OS=Arabidopsis thaliana GN=PME30 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.229e-52
Identity = 101/201 (50.25%), Postives = 124/201 (61.69%), Query Frame = -1
Query:  259 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 861
            V  D+S  YRC +  +QD LY HS RQFY  C I GTVDFI GNA AVFQ C I AR+P   Q N++TAQ R   +  +G  IQ C I  +SDL     + +TYLGRPW+R+S   V+QS I D+++PAGW  W G   L TL Y EYQN G GA TS RVKWS FKV+    +A  +T A  + G TWL  +  P+  GL
Sbjct:  299 VSGDMSVIYRCRVEGYQDALYPHSDRQFYRECFITGTVDFICGNAVAVFQFCQIVARQPKMGQSNVITAQSRATKDVKSGFSIQNCNITTSSDLDTA--TVKTYLGRPWRRFSTVAVLQSFIGDLVDPAGWTPWKGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKKATEFTVAKLLDGETWLKESRIPYESGL 497          
The following BLAST results are available for this feature:
BLAST of CF832326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
PME60_ARATH2.987e-5453.03Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME28_ARATH2.987e-5451.26Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME12_ARATH3.902e-5449.25Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME58_ARATH1.135e-5348.22Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME43_ARATH1.483e-5347.98Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME23_ARATH3.303e-5348.48Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME38_ARATH9.610e-5353.00Putative pectinesterase/pectinesterase inhibitor 3... [more]
PME42_ARATH1.255e-5250.75Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME19_ARATH1.255e-5251.74Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME30_ARATH6.229e-5250.25Probable pectinesterase 30 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01L01_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01L01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832326 ID=CF832326; Name=CF832326; organism=Citrus sinensis; type=EST; length=861bp
TTTTTTTTTTTTTTAAGCTCAATCAGCAGTAGTACTTTAATTTTAGGGAG
CAACGCATGCAATCATCATCCATAATTCCCTGCTGAGATAAATCTCTTAC
ATCAAACTCGAGCAGACTCACACAAATAAAATCATCAAACTTGAGCAGAC
TCGCACAAATAAAATCATCAAACATCTAGCGGAGCAAGTGTTATTTATTG
CTAGCTAGGACATTTATAGGCAGCTGAGCTTAGCTATGGCCTATGTATGA
CAAATTCACAGACCAAGAGAGAAAGGAAACCCAGTGGAGCCAAGCCAAGT
ACTCCCTGCAATAAAATTCGCAGCTGTATAAGTTTGAGCCTCAGCTGCAC
TAGTAATCACCTTGAATGTGCTCCATTTCACCCTATTCGATGTGTCAGCA
CCAGCACCTGTGTTTTGATACTCTGCATAAAACAATGTGTCCAATGCAAA
ATTCCCACTCCATTCATACCACCCAGCTGGGTTAATAACATCACTTATAT
CAGATTGCATCACAACAGTCCTCGAGTACCGCTTCCATGGCCTGCCTAAA
TATGTCTCAAAGCTGCCCTTTACAGCAAGTAAATCTGATGTTGCACCAAT
CCTGCATTTTTGTATCACTATGCCTGTGTTCTGATTCGGGTCGTCGCGGC
CTTGTGCCGTGACCATGTTCCTTTGGTTTGGATTGGGGCGGCGAGCATGG
ATGTCACAGTTTTGGAACACAGCTGCTGCATTTCCGAAAATGAAGTCCAC
TGTGCCTGCTATAATGCAGCTGGTATAAAATTGGCGAAGTGAGTGTACAT
AGAGAGTGTCTTGGAATGCTAGCATGTCACACCTATAGAATGCTGATAAA
TCTGATCCTAC
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