CF832326

Overview
NameCF832326
Unique NameCF832326
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.136e-52
Identity = 96/194 (49.48%), Postives = 130/194 (67.01%), Query Frame = -1
Query:  280 GSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW-SGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTG 858
            GSD S +Y+C    FQDTLY HS RQFY  C + GT+DFIFG+AA VFQ C I  R+P  NQ N +TAQG+ DPNQ++G+ IQ+C I A  +++A      TYLGRPWK +S TV+M++ I  V+ P+GW  W SG     ++ Y EY+NTG G+D + RVKW+ +K + S AEA  +T A  + G+ W+ +TG
Sbjct:  392 GSDFSVYYQCSFDGFQDTLYPHSNRQFYRDCDVTGTIDFIFGSAAVVFQGCKIMPRQPLSNQFNTITAQGKKDPNQSSGMSIQRCTISANGNVIA-----PTYLGRPWKEFSTTVIMETVIGAVVRPSGWMSWVSGVDPPASIVYGEYKNTGPGSDVTQRVKWAGYKPVMSDAEAAKFTVATLLHGADWIPATG 580          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME_PETIN (Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.446e-49
Identity = 96/203 (47.29%), Postives = 120/203 (59.11%), Query Frame = -1
Query:  259 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWS-GNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAG-STWLGSTGFPFSLGL 861
            V +D +  Y C +  +QDTLYVH+ RQFY  C I GTVDFIFGN  AV QNC +  R+P  NQ  MVTAQGR +P Q   IV+Q C I   +D  ++    +TYLGRPWK YSRT++MQS I   I P GW  W+  NF  DT +YAEYQN G GA    R+ W  F+   +   AQ +TA  +I     WL     P+  G+
Sbjct:  169 VSADKAIIYNCQIDGYQDTLYVHTYRQFYRDCTITGTVDFIFGNGEAVLQNCKVIVRKPAQNQSCMVTAQGRTEPIQKGAIVLQNCEIKPDTDYFSLSPPSKTYLGRPWKEYSRTIIMQSYIDKFIEPEGWAPWNITNFGRDTSYYAEYQNRGPGAALDKRITWKGFQKGFTGEAAQKFTAGVYINNDENWLQKANVPYEAGM 371          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.450e-48
Identity = 93/191 (48.69%), Postives = 121/191 (63.35%), Query Frame = -1
Query:  292 SDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNF--ALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAG-STWL 855
            SD S +YRC    +QDTLY HS RQ+Y +C + GTVDFIFG    VFQ C I  R+P PNQ N +TA+G  + NQNTGI I +C I    ++ A      TYLGRPWK +S+TV+MQS I   +NPAGW  W+  +     T+FY EY+N+G G+D S RVKW+ +K I+S  EA  +T   F+ G   W+
Sbjct:  773 SDRSVYYRCSFDGYQDTLYTHSNRQYYRNCDVTGTVDFIFGAGTVVFQGCSIRPRQPLPNQFNTITAEGTQEANQNTGISIHQCTISPNGNVTAT-----TYLGRPWKLFSKTVIMQSVIGSFVNPAGWIAWNSTYDPPPRTIFYREYKNSGPGSDLSKRVKWAGYKPISSDDEAARFTVKYFLRGDDNWI 958          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 4.781e-44
Identity = 90/200 (45.00%), Postives = 117/200 (58.50%), Query Frame = -1
Query:  283 SDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDI-----HARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLL----AVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGST 855
            SD S    C+ L  QDTLY HSLRQFY  C I G VDFIFGN+AAVFQ+CDI     H++       N +TA GR D +Q+TG V   C I  T + +    A     + +LGRPWK +SRTV +  ++  +I+P GW  W+G+FAL TL+Y EY+NTG G+  S+RV WS+            Y+ ANFI    W  +T
Sbjct:  405 SDFSVLENCEFLGNQDTLYAHSLRQFYKQCRIQGNVDFIFGNSAAVFQDCDILIASKHSKLEQGGANNAITAHGRIDASQSTGFVFLNCSINGTEEYMKEFQANPEGHKNFLGRPWKEFSRTVFVNCNLESLISPDGWMPWNGDFALKTLYYGEYKNTGPGSVRSSRVPWSS---EIPEKHVDVYSVANFIQADEWASTT 601          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME51_ARATH (Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana GN=PME51 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.244e-44
Identity = 91/195 (46.67%), Postives = 116/195 (59.49%), Query Frame = -1
Query:  295 SDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDI----HARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGS----FETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTW 855
            SD S    C+ L  QDTLY H LRQFY +C I G VDFIFGN+AAVFQ+C+I        P   ++N VTAQGR DP+Q+TG V   C I  T + + +  +     + +LGRPWK YSRTV +  ++  +I P GW  WSG+FAL TL+Y E +NTG G+D S RV WS+            Y+ ANFI    W
Sbjct:  355 SDFSLIENCEFLGNQDTLYAHGLRQFYKNCRIQGNVDFIFGNSAAVFQDCEILIAPRQINPEKGEKNAVTAQGRIDPSQSTGFVFLNCLINGTEEYMKLFKANPKVHKNFLGRPWKDYSRTVFIGCNLEALITPDGWLPWSGDFALKTLYYGESKNTGPGSDRSQRVSWSS---QIPDEHVHVYSVANFIQADEW 546          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME54_ARATH (Probable pectinesterase/pectinesterase inhibitor 54 OS=Arabidopsis thaliana GN=PME54 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.286e-43
Identity = 87/172 (50.58%), Postives = 109/172 (63.37%), Query Frame = -1
Query:  355 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPN-PNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW--SGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVI 861
            + SD S  YRC +  +QDTLY  +LRQFY  C I GT+DFIFGNAAAVFQ+C+I  RRP+     N++ A GR D  QNTG  +  CRI   SDL  VK  + +YLGRPW++YSR +VM+S I D I   GW  W  SG+  L TL++ E++N G  A  S RV W  F  I
Sbjct:  308 ITSDQSVLYRCSISGYQDTLYAAALRQFYRECDIYGTIDFIFGNAAAVFQSCNIFLRRPHGVKAYNVILANGRTDQRQNTGFALHSCRIRTDSDLSPVKHKYSSYLGRPWRKYSRAIVMESYIDDAIAEGGWAGWLDSGDEVLKTLYFGEFKNYGPKARISKRVTWEGFHSI 479          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME_MEDSA (Pectinesterase/pectinesterase inhibitor OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.623e-42
Identity = 90/205 (43.90%), Postives = 116/205 (56.59%), Query Frame = -1
Query:  262 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTA-----ANFIAGSTWLGSTGFPFSLG 861
            V +D + FY C M  FQDTLYV S RQFY  C I+GT+DF+FG    VFQNC +  R P   Q+ +VTA GR+  N  + +V Q         L +V     +YLGRPWK+YS+ V+M S I  +  P G+  W G+   +T  Y EY N G GADT+ RVKW   KV+TS   A+ Y        N  A  TW+  +G P+SLG
Sbjct:  242 VTADQAIFYNCQMDGFQDTLYVQSQRQFYRDCSISGTIDFVFGERFGVFQNCKLVCRLPAKGQQCLVTAGGREKQNSASALVFQSSHFTGEPALTSVTPKV-SYLGRPWKQYSKVVIMDSTIDAIFVPEGYMPWMGSAFKETCTYYEYNNKGPGADTNLRVKWHGVKVLTSNVAAEYYPGKFFEIVNATARDTWIVKSGVPYSLG 445          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME37_ARATH (Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana GN=VGDH2 PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 4.475e-42
Identity = 87/202 (43.07%), Postives = 120/202 (59.41%), Query Frame = -1
Query:  259 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDD-PNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 861
            V  D +  + C    +QDTLYV++ RQFY + +++GTVDFIFG +A V QN  I  R+ +P Q N VTA G +       GIV+  CRI    +L A K + ++YLGRPWK+++ TV++ ++I D+I P GW EW G     T  Y E+ N G GA T+ R  W   KV  SAAE +TYT AN++  + W+     P  LGL
Sbjct:  389 VNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILVRKGSPGQSNYVTADGNEKGAAMKIGIVLHNCRIIPDKELEADKLTIKSYLGRPWKKFATTVIIGTEIGDLIKPEGWTEWQGEQNHKTAKYIEFNNRGPGAATTQRPPW--VKVAKSAAEVETYTVANWVGPANWIQEANVPVQLGL 588          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME5_ARATH (Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 PE=2 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 3.788e-41
Identity = 88/202 (43.56%), Postives = 116/202 (57.43%), Query Frame = -1
Query:  259 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDP-NQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 861
            V  D +  + C    +QDTLYV++ RQFY + +++GTVDFIFG +A V QN  I  R+ N  Q N VTA G +       GIV+Q CRI     L A +   E+YLGRPWK++S TV++ S+I DVI P GW  W G     +  Y EY N G GA T+ RV W   K+  SAAE   +T AN++    W+     P +LGL
Sbjct:  396 VNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLIVVRKGNKGQFNTVTADGNEKGLAMKIGIVLQNCRIVPDKKLAAERLIVESYLGRPWKKFSTTVIINSEIGDVIRPEGWKIWDGESFHKSCRYVEYNNRGPGAITNRRVNW--VKIARSAAEVNDFTVANWLGPINWIQEANVPVTLGL 595          
BLAST of CF832326 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.439e-41
Identity = 85/202 (42.08%), Postives = 121/202 (59.90%), Query Frame = -1
Query:  259 VGSDLSAFYRCDMLAFQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQ-NTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 861
            V  D +  + C    +QDTLYV++ RQFY + +++GTVDFIFG +A V QN  I  R+ +P Q N VTA G +       GIV+  CRI A  +L A + + ++YLGRPWK ++ T V+ ++I D+I P GW EW G     T  Y E+ N G GA+T+ RV W+  K+  SAAE + +T AN++  + W+     P  LGL
Sbjct:  385 VNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILCRKGSPGQTNHVTADGNEKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANTAARVPWA--KMAKSAAEVERFTVANWLTPANWIQEANVPVQLGL 584          
The following BLAST results are available for this feature:
BLAST of CF832326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
PME1_ARATH8.136e-5249.48Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 P... [more]
PME_PETIN6.446e-4947.29Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=... [more]
PME26_ARATH2.450e-4848.69Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME64_ARATH4.781e-4445.00Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME51_ARATH6.244e-4446.67Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME54_ARATH5.286e-4350.58Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME_MEDSA2.623e-4243.90Pectinesterase/pectinesterase inhibitor OS=Medicag... [more]
PME37_ARATH4.475e-4243.07Probable pectinesterase/pectinesterase inhibitor V... [more]
PME5_ARATH3.788e-4143.56Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 P... [more]
PME_BRANA8.439e-4142.08Probable pectinesterase/pectinesterase inhibitor O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01L01_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01L01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832326 ID=CF832326; Name=CF832326; organism=Citrus sinensis; type=EST; length=861bp
TTTTTTTTTTTTTTAAGCTCAATCAGCAGTAGTACTTTAATTTTAGGGAG
CAACGCATGCAATCATCATCCATAATTCCCTGCTGAGATAAATCTCTTAC
ATCAAACTCGAGCAGACTCACACAAATAAAATCATCAAACTTGAGCAGAC
TCGCACAAATAAAATCATCAAACATCTAGCGGAGCAAGTGTTATTTATTG
CTAGCTAGGACATTTATAGGCAGCTGAGCTTAGCTATGGCCTATGTATGA
CAAATTCACAGACCAAGAGAGAAAGGAAACCCAGTGGAGCCAAGCCAAGT
ACTCCCTGCAATAAAATTCGCAGCTGTATAAGTTTGAGCCTCAGCTGCAC
TAGTAATCACCTTGAATGTGCTCCATTTCACCCTATTCGATGTGTCAGCA
CCAGCACCTGTGTTTTGATACTCTGCATAAAACAATGTGTCCAATGCAAA
ATTCCCACTCCATTCATACCACCCAGCTGGGTTAATAACATCACTTATAT
CAGATTGCATCACAACAGTCCTCGAGTACCGCTTCCATGGCCTGCCTAAA
TATGTCTCAAAGCTGCCCTTTACAGCAAGTAAATCTGATGTTGCACCAAT
CCTGCATTTTTGTATCACTATGCCTGTGTTCTGATTCGGGTCGTCGCGGC
CTTGTGCCGTGACCATGTTCCTTTGGTTTGGATTGGGGCGGCGAGCATGG
ATGTCACAGTTTTGGAACACAGCTGCTGCATTTCCGAAAATGAAGTCCAC
TGTGCCTGCTATAATGCAGCTGGTATAAAATTGGCGAAGTGAGTGTACAT
AGAGAGTGTCTTGGAATGCTAGCATGTCACACCTATAGAATGCTGATAAA
TCTGATCCTAC
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