CF832327

Overview
NameCF832327
Unique NameCF832327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3965 contig Csv1_Contig3965:730..1375. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME43_ARATH (Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=PME43 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 8.776e-57
Identity = 108/223 (48.43%), Postives = 149/223 (66.82%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGST--------TFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y+E VEV KK +++MF            ++ V+ G          T+ +A+VAV GD F+A+DI F+NTAG ++HQAVALRV +D + F+ C M  YQDTLYVH+ RQFY +C ++GT+DF+FG+A AVFQNC+   RRP  +Q+ +VTAQGR D  + TGIVI   RI   +  L VK     +LGRPWK +SRT++M ++I DVI+P GW +W+  FAL+T
Sbjct:  429 YKEKVEVTKKMLHVMFVGDGP-------TKTVITGDIAFLPDQVGTYRTASVAVNGDYFMAKDIGFENTAGAARHQAVALRVSADFAVFFNCHMNGYQDTLYVHTHRQFYRNCRVSGTIDFVFGDAKAVFQNCEFVIRRPMEHQQCIVTAQGRKDRRETTGIVIHNSRITGDASYLPVKAKNRAFLGRPWKEFSRTIIMNTEIDDVIDPEGWLKWNETFALNT 644          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME33_ARATH (Probable pectinesterase/pectinesterase inhibitor 33 OS=Arabidopsis thaliana GN=PME33 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.497e-56
Identity = 113/217 (52.07%), Postives = 141/217 (64.98%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW--SGNFALDT 646
            YRE ++V     N+M              R+V  G TT+NSAT    G  F+A+D+TF NTAGP + QAVA+R  SDLS FYR  +  +QDTLY+HS RQF+  C I+GT+DFIFGNAA VFQNC I  RRP   Q N++TAQGR DP QNTGI I   RI A SDL  V  +++TYLGRPW+ YSR  +M++ I + I+P GW  W    NFAL+T
Sbjct:  319 YRENIDVGNDNHNIMLVGDGERKTIITSGRSVQHGYTTYNSATGGFGGQRFVAKDMTFINTAGPLRGQAVAVRSSSDLSVFYRVGIHGFQDTLYIHSQRQFFRECYISGTIDFIFGNAAVVFQNCMILVRRPLHGQANIITAQGRGDPFQNTGITIHSSRIIAASDLKPVIRAYKTYLGRPWQAYSRVTIMKTYIDNSISPLGWSPWLRGSNFALNT 535          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME45_ARATH (Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.335e-56
Identity = 110/216 (50.93%), Postives = 138/216 (63.89%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW-SGNFALDT 646
            Y E V + KKK N+              +++      TF +AT    G+GF+A+ + F+NTAGP  HQAVA+RV SD S F  C    YQDTLY ++ RQ+Y SC+I GTVDFIFG+AAA+FQNCDI  R+  P Q+N VTAQGR D  Q TG VI  C +    DL  VK  F++YLGRPWK +SRTVVM+S I DVI+P GW  W   +FA+DT
Sbjct:  334 YDESVIIDKKKPNVTMVGDGSQKTIVTGNKSHAKKIRTFLTATFVAQGEGFMAQSMGFRNTAGPEGHQAVAIRVQSDRSVFLNCRFEGYQDTLYAYTHRQYYRSCVIIGTVDFIFGDAAAIFQNCDIFIRKGLPGQKNTVTAQGRVDKFQTTGFVIHNCTVAPNEDLKPVKAQFKSYLGRPWKPHSRTVVMESTIEDVIDPVGWLRWQETDFAIDT 549          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME_PETIN (Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 7.430e-56
Identity = 106/216 (49.07%), Postives = 137/216 (63.43%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWS-GNFALDT 646
            Y+E +++PK   N++             +++V DG +TF++ TV V G  F+A++I F+NTAGP K QAVALRV +D +  Y C +  YQDTLYVH+ RQFY  C I GTVDFIFGN  AV QNC +  R+P  NQ  MVTAQGR +P Q   IV+Q C I   +D  ++    +TYLGRPWK YSRT++MQS I   I P GW  W+  NF  DT
Sbjct:   96 YKEYIDIPKSMTNVVLIGEGPTKTKITGNKSVKDGPSTFHTTTVGVNGANFVAKNIGFENTAGPEKEQAVALRVSADKAIIYNCQIDGYQDTLYVHTYRQFYRDCTITGTVDFIFGNGEAVLQNCKVIVRKPAQNQSCMVTAQGRTEPIQKGAIVLQNCEIKPDTDYFSLSPPSKTYLGRPWKEYSRTIIMQSYIDKFIEPEGWAPWNITNFGRDT 311          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME56_ARATH (Probable pectinesterase 56 OS=Arabidopsis thaliana GN=PME56 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 9.703e-56
Identity = 106/204 (51.96%), Postives = 136/204 (66.67%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGW 613
            Y+E + + KKK NL                N VDG  TF+SAT+AV   GF+A+D+  +NTAGP K QAVALR+ +D++  YRC + AYQDTLY +S RQFY  C I GTVDFIFG AAAVFQ C I AR+P   Q N++TAQ R++    +G   QKC I A+SDL  +KG+ +T+LGRPW+ +SR V M+S I DVI+ AGW
Sbjct:   83 YKEVIRIGKKKTNLTLVGDGRDLTVLSGDLNGVDGIKTFDSATLAVDESGFMAQDLCIRNTAGPEKRQAVALRISTDMTIIYRCRIDAYQDTLYAYSGRQFYRDCYITGTVDFIFGRAAAVFQYCQIEARKPGIGQTNILTAQSREEDTATSGFSFQKCNISASSDLTPIKGTVKTFLGRPWRAFSRVVFMESFIDDVIDRAGW 286          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME13_ARATH (Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana GN=PME13 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.267e-55
Identity = 107/216 (49.54%), Postives = 139/216 (64.35%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW-SGNFALDT 646
            Y E V V KKK NL              +++      TF +AT    G+GF+A+ + F+NTAG   HQAVA+RV SD S F  C    YQDTLY ++ RQ+Y SC+I GT+DFIFG+AAA+FQNC+I  R+  P Q+N VTAQGR D  Q TG V+  C+I A  DL  VK  +++YLGRPWK YSRT++M+S I +VI+P GW  W   +FA+DT
Sbjct:  339 YDEYVTVDKKKANLTMVGDGSQKTIVTGNKSHAKKIRTFLTATFVAQGEGFMAQSMGFRNTAGSEGHQAVAIRVQSDRSIFLNCRFEGYQDTLYAYTHRQYYRSCVIVGTIDFIFGDAAAIFQNCNIFIRKGLPGQKNTVTAQGRVDKFQTTGFVVHNCKIAANEDLKPVKEEYKSYLGRPWKNYSRTIIMESKIENVIDPVGWLRWQETDFAIDT 554          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME51_ARATH (Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana GN=PME51 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.830e-54
Identity = 113/224 (50.45%), Postives = 139/224 (62.05%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNV-VDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDI----HARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLL----AVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDT 646
            Y E V VP +K N++F            S N  + G TT+N+ATV VVGDGF+ARD+TFQNTAGP  HQAVA R  SD S    C+ L  QDTLY H LRQFY +C I G VDFIFGN+AAVFQ+C+I        P   ++N VTAQGR DP+Q+TG V   C I  T + +    A     + +LGRPWK YSRTV +  ++  +I P GW  WSG+FAL T
Sbjct:  279 YEENVIVPFEKKNVVFIGDGMGKTVITGSLNAGMPGITTYNTATVGVVGDGFMARDLTFQNTAGPDAHQAVAFRSDSDFSLIENCEFLGNQDTLYAHGLRQFYKNCRIQGNVDFIFGNSAAVFQDCEILIAPRQINPEKGEKNAVTAQGRIDPSQSTGFVFLNCLINGTEEYMKLFKANPKVHKNFLGRPWKDYSRTVFIGCNLEALITPDGWLPWSGDFALKT 502          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 5.324e-54
Identity = 102/207 (49.28%), Postives = 134/207 (64.73%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW 622
            Y E V + K K N+M             S+N VDG+ T+ +AT A+ G GF+ +DI   NTAG +KHQAVA R GSD S +Y+C    +QDTLY HS RQFY  C + GT+DFIFG+AA VFQ C I  R+P  NQ N +TAQG+ DPNQ++G+ IQ+C I A  +++A      TYLGRPWK +S TV+M++ I  V+ P+GW  W
Sbjct:  318 YVENVVMDKSKWNVMIYGDGKGKTIISGSKNFVDGTPTYETATFAIQGKGFIMKDIGIINTAGAAKHQAVAFRSGSDFSVYYQCSFDGFQDTLYPHSNRQFYRDCDVTGTIDFIFGSAAVVFQGCKIMPRQPLSNQFNTITAQGKKDPNQSSGMSIQRCTISANGNVIA-----PTYLGRPWKEFSTTVIMETVIGAVVRPSGWMSW 519          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME60_ARATH (Probable pectinesterase/pectinesterase inhibitor 60 OS=Arabidopsis thaliana GN=PME60 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.643e-53
Identity = 112/217 (51.61%), Postives = 134/217 (61.75%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWS--GNFALDT 646
            Y+E + V     N+M              R+V  G TT++SAT  + G  F+A+ I FQNTAGP+K QAVALR  SDLS FYRC +  YQDTL VHS RQFY  C I GTVDFIFGNAA VFQNC I  R P   Q N++TAQGR D  QNTGI I    I    DL  V  S +TY+GRPW  YSRTVV+++ I  V++P GW  W+    + LDT
Sbjct:  265 YQENLNVRLNNDNIMLVGDGMRYTIITGGRSVKGGYTTYSSATAGIEGLHFIAKGIAFQNTAGPAKGQAVALRSSSDLSIFYRCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAVVFQNCIILPRLPLKGQANVITAQGRTDLFQNTGISIHNSIIIPAPDLKPVVRSVKTYMGRPWMMYSRTVVLKTYIDSVVSPVGWSPWTKGSTYGLDT 481          
BLAST of CF832327 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.643e-53
Identity = 103/211 (48.82%), Postives = 128/211 (60.66%), Query Frame = 2
Query:    2 YREPVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNF 634
            Y E V + K K N+              S N+VDG  TFN++T A  G GF+ +D+   NTAGP KHQAVA R  SD S +YRC    YQDTLY HS RQ+Y +C + GTVDFIFG    VFQ C I  R+P PNQ N +TA+G  + NQNTGI I +C I    ++ A      TYLGRPWK +S+TV+MQS I   +NPAGW  W+  +
Sbjct:  698 YVENVLMKKDKWNVFIYGDGRDKTIISGSTNMVDGVRTFNTSTFATEGKGFMMKDMGIINTAGPEKHQAVAFRSDSDRSVYYRCSFDGYQDTLYTHSNRQYYRNCDVTGTVDFIFGAGTVVFQGCSIRPRQPLPNQFNTITAEGTQEANQNTGISIHQCTISPNGNVTAT-----TYLGRPWKLFSKTVIMQSVIGSFVNPAGWIAWNSTY 903          
The following BLAST results are available for this feature:
BLAST of CF832327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME43_ARATH8.776e-5748.43Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME33_ARATH1.497e-5652.07Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME45_ARATH3.335e-5650.93Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME_PETIN7.430e-5649.07Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=... [more]
PME56_ARATH9.703e-5651.96Probable pectinesterase 56 OS=Arabidopsis thaliana... [more]
PME13_ARATH1.267e-5549.54Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME51_ARATH1.830e-5450.45Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME1_ARATH5.324e-5449.28Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 P... [more]
PME60_ARATH2.643e-5351.61Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME26_ARATH2.643e-5348.82Putative pectinesterase/pectinesterase inhibitor 2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01L01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01L01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832327 ID=CF832327; Name=CF832327; organism=Citrus sinensis; type=EST; length=646bp
GTACAGAGAACCTGTTGAGGTGCCGAAGAAGAAAATTAATCTTATGTTTA
TTGGAGATGGGAGGACTACTACAATAATCACCGGTAGCAGGAATGTGGTT
GATGGCAGCACTACATTCAACTCTGCAACTGTTGCTGTGGTAGGGGACGG
ATTCTTGGCCAGAGACATAACATTTCAAAACACGGCGGGTCCGTCAAAAC
ATCAAGCCGTGGCACTGAGAGTAGGATCAGATTTATCAGCATTCTATAGG
TGTGACATGCTAGCATACCAAGACACTCTCTATGTACACTCACTTCGCCA
ATTTTATACCAGCTGCATTATAGCAGGCACAGTGGACTTCATTTTCGGAA
ATGCAGCAGCTGTGTTCCAAAACTGTGACATCCATGCTCGCCGCCCCAAT
CCAAACCAAAGGAACATGGTCACGGCACAAGGCCGCGACGACCCGAATCA
GAACACAGGCATAGTGATACAAAAATGCAGGATTGGTGCAACATCAGATT
TACTTGCTGTAAAGGGCAGCTTTGAGACATATTTAGGCAGGCCATGGAAG
CGGTACTCGAGGACTGTTGTGATGCAATCTGATATAAGTGATGTTATTAA
CCCAGCTGGGTGGTATGAATGGAGTGGGAATTTTGCATTGGACACA
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