CF832329
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME57_ARATH (Putative pectinesterase 57 OS=Arabidopsis thaliana GN=PME57 PE=3 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.822e-20 Identity = 54/127 (42.52%), Postives = 67/127 (52.76%), Query Frame = 1 Query: 1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDI 381 Y++ V + K NL + + + TFN+AT A GDGF+ D+ F+NT P K V LRV D+S YRC + YQD LY H RQ Y + TVDFI GNAAAVFQ C I Sbjct: 115 YVEIVVIGNMKSNLTLIADGQDSTIITFNLSSSNSKRTFNTATFASNGDGFIRVDMCFRNTTWPVKGPVVTLRVNGDMSIIYRCRVEEYQDALYPHKNRQCYREYFLMDTVDFICGNAAAVFQFCQI 241
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME63_ARATH (Putative pectinesterase 63 OS=Arabidopsis thaliana GN=PME63 PE=3 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.542e-19 Identity = 58/190 (30.53%), Postives = 96/190 (50.53%), Query Frame = 1 Query: 112 TFNSATVAVVGDGFLARDITFQNTA----GPSKH-QAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQ 666 T +SAT+ V+ D F+A +I +N+A G K QA+++R+ + +AFY C YQDT+ + F+ C I GT DFIFG+ +++ ++ + ++TA + +G C++ T + YLGR W + + V +D+S V+NP+GW E T+FY EY+ Sbjct: 116 TVDSATLIVLSDYFMAVNIILKNSAPMPDGKRKGAQALSMRISGNKAAFYNCKFYGYQDTICDDTGNHFFKDCYIEGTFDFIFGSGRSLYLGTQLNV---VGDGIRVITAHAGKSAAEKSGYSFVHCKVTGTGTGI--------YLGRSWMSHPKVVYAYTDMSSVVNPSGWQENREAGRDKTVFYGEYK 294
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PPME1_ARATH (Pectinesterase PPME1 OS=Arabidopsis thaliana GN=PPME1 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.487e-19 Identity = 53/190 (27.89%), Postives = 95/190 (50.00%), Query Frame = 1 Query: 112 TFNSATVAVVGDGFLARDITFQNTA----GPSKH-QAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQ 666 T +SA++ ++ D F+A +I +NTA G +K QA+++R+ + +AFY C +QDT+ + F+ C + GT DFIFG+ +++ +H + ++ A + +G C++ T + YLGR W + + V ++++ V+NP GW E T+FY EY+ Sbjct: 139 TVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHV---VGDGIRVIAAHAGKSAEEKSGYSFVHCKVTGTGGGI--------YLGRAWMSHPKVVYAYTEMTSVVNPTGWQENKTPAHDKTVFYGEYK 317
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME48_ARATH (Probable pectinesterase 48 OS=Arabidopsis thaliana GN=PME48 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 4.487e-19 Identity = 53/190 (27.89%), Postives = 95/190 (50.00%), Query Frame = 1 Query: 112 TFNSATVAVVGDGFLARDITFQNTA----GPSKH-QAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQ 666 T +SA++ ++ D F+A +I +NTA G +K QA+++R+ + +AFY C +QDT+ + F+ C + GT DFIFG+ +++ +H + ++ A + +G C++ T + YLGR W + + V ++++ V+NP GW E T+FY EY+ Sbjct: 139 TVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHV---VGDGIRVIAAHAGKSAEEKSGYSFVHCKVTGTGGGI--------YLGRAWMSHPKVVYAYTEMTSVVNPTGWQENKTPAHDKTVFYGEYK 317
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME66_ARATH (Probable pectinesterase 66 OS=Arabidopsis thaliana GN=PME66 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.556e-16 Identity = 58/183 (31.69%), Postives = 81/183 (44.26%), Query Frame = 1 Query: 100 DGSTTFNSATVAVVGDGFLARDITFQNTAG--PSKHQ----AVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHAR---RPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW 621 D T SAT D + ITF+NT P+ + AVA R+ D + QDTL+ R +Y CII+G +DFIFG ++F+ C ++ N +TA R P+ G V C V G +T LGR W +R + +S +SDV+ P GW W Sbjct: 101 DHQATDISATFTAFADDIVISGITFKNTYNIVPNNKREIVPAVAARMLGDRYVVTDSSFVGLQDTLFDGKGRHYYKRCIISGGIDFIFGYGQSLFKECTLNMTLGIYAPDNPYGTITAHQRPSPSDEGGFVFSDC---------TVTGVGKTLLGRAWGSNARVIFDRSRLSDVVLPIGWDAW 274
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PMEA_ERWCH (Pectinesterase A OS=Erwinia chrysanthemi GN=pemA PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.758e-15 Identity = 62/171 (36.26%), Postives = 85/171 (49.71%), Query Frame = 1 Query: 100 DGST--TFNSATVAVVGDGFLARDITFQNT----AGPSKH----------QAVALRV--GSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARR----PNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPW 546 DGS T S+T+ + F A+ +T +N A +K QAVAL V D + F ++ YQDTLYV R F++ C I+GTVDFIFG+ A+F NCD+ +R + N +TA + NQ G+VI R+ SD + K LGRPW Sbjct: 103 DGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPS-TNINQKYGLVITNSRVIRESDSVPAK---SYGLGRPW 269
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PMEA_DICD3 (Pectinesterase A OS=Dickeya dadantii (strain 3937) GN=pemA PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.758e-15 Identity = 62/171 (36.26%), Postives = 85/171 (49.71%), Query Frame = 1 Query: 100 DGST--TFNSATVAVVGDGFLARDITFQNT----AGPSKH----------QAVALRV--GSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARR----PNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPW 546 DGS T S+T+ + F A+ +T +N A +K QAVAL V D + F ++ YQDTLYV R F++ C I+GTVDFIFG+ A+F NCD+ +R + N +TA + NQ G+VI R+ SD + K LGRPW Sbjct: 103 DGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPS-TNINQKYGLVITNSRVIRESDSVPAK---SYGLGRPW 269 The following BLAST results are available for this feature:
BLAST of CF832329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832329 ID=CF832329; Name=CF832329; organism=Citrus sinensis; type=EST; length=668bpback to top |