CF832332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_ARCFU (30S ribosomal protein S7P OS=Archaeoglobus fulgidus GN=rps7p PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.896e-15 Identity = 46/105 (43.81%), Postives = 61/105 (58.10%), Query Frame = 2 Query: 62 LFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 +F ++ +VQ++D L YI + YVPH GR++ F K + IVERL N +M G N G K++A IV A EII T NPIQV+ DA+IN GPR Sbjct: 12 VFGKYDPSEVQISDPALESYICLEPK----YVPHNHGRHANVPFAKQKVFIVERLINKVMRKGHNTGKKILAYNIVKEAFEIIEKKTKKNPIQVLVDAIINAGPR 112
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_METBU (30S ribosomal protein S7P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps7p PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 5.089e-15 Identity = 40/105 (38.10%), Postives = 66/105 (62.86%), Query Frame = 2 Query: 62 LFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 LF +W +V+V D + Y+ + VPHT+G+++ ++F K+ IVERL N++M + +N G K +A+ IV+ A +I++ T NP+QV+ +AV N GPR Sbjct: 4 LFGKWDLTEVEVADAGIKRYVNL----DPVIVPHTSGKHARQQFNKSDITIVERLVNNVMRNAQNTGKKQIALRIVDEAFDIVNSKTKKNPVQVLVEAVSNAGPR 104
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_METB6 (30S ribosomal protein S7P OS=Methanoregula boonei (strain 6A8) GN=rps7p PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.481e-14 Identity = 45/121 (37.19%), Postives = 66/121 (54.55%), Query Frame = 2 Query: 14 VLALSQDPSPPRYNVNLFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 V A + + P+ LF +W +V+V D L Y+ + +PH+ G++S + F KA IVERL N LM N G K +A+ IV A E+I+ T NPI+V+ +A+ N GPR Sbjct: 6 VKAQPEGDAAPQSKALLFNKWDVSEVKVTDPSLVRYVNLTPQ----IIPHSCGKFSRQEFNKANMMIVERLINRLMQTENNTGKKQLAIGIVRDAFELINKKTKRNPIEVLVEAIGNTGPR 122
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_METST (30S ribosomal protein S7P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps7p PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.934e-14 Identity = 45/105 (42.86%), Postives = 62/105 (59.05%), Query Frame = 2 Query: 62 LFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 LF +W +V V D+ L +Y+ + VPHT GR+ ++F K++ IVERL N +M RN+G K A +IV ALEII+ T NP+QV+ AV N PR Sbjct: 5 LFDKWDVTEVTVEDMGLQNYVCL----DEIVVPHTMGRHVKRQFAKSKVSIVERLMNKIMRTERNSGKKNKAYSIVEDALEIINNKTKQNPVQVLVKAVENTAPR 105
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_NATPD (30S ribosomal protein S7P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps7p PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.526e-14 Identity = 45/110 (40.91%), Postives = 59/110 (53.64%), Query Frame = 2 Query: 47 RYNVNLFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 R + LF W +++ +D YI V T + HT GR+S K+F K++ IVERL N LM N G K A IV A +I+ TD NP+QV+ AV N GPR Sbjct: 18 RVSAQLFGEWEIGEIEYDDPSTRRYITV------TPIAHTMGRHSEKQFKKSEISIVERLINRLMQTDENTGKKQQATKIVREAFDIVAERTDENPVQVLVTAVENAGPR 121
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_METMA (30S ribosomal protein S7P OS=Methanosarcina mazei GN=rps7p PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.348e-14 Identity = 38/105 (36.19%), Postives = 63/105 (60.00%), Query Frame = 2 Query: 62 LFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 +F +W +V+V D+ + Y+ + VPH++G+++ ++F K++ IVERL N+LM N G K + + V A +II+ T NPIQ++ DA+ N GPR Sbjct: 7 IFGKWDPTEVEVRDLGIKRYVSLAPV----IVPHSSGKHARQQFNKSEISIVERLANNLMRTETNTGKKQVTLRAVEEAFDIINRKTQQNPIQILVDAIANAGPR 107
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_METVS (30S ribosomal protein S7P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps7p PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 9.597e-14 Identity = 44/110 (40.00%), Postives = 59/110 (53.64%), Query Frame = 2 Query: 47 RYNVNLFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 + + LF +W V V D L +I + + +PHTAGR S K F K + +VERL N LM N G K ++I+ AL I+ T NPIQV+ DA+ N GPR Sbjct: 6 KLEIKLFGKWDSTSVTVKDPSLKSHISL----NPVLIPHTAGRNSKKMFDKNKMHVVERLANKLMATQVNTGKKNEVLSIIEEALTIVENRTKENPIQVVVDALENSGPR 111
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_METAC (30S ribosomal protein S7P OS=Methanosarcina acetivorans GN=rps7p PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.597e-14 Identity = 38/105 (36.19%), Postives = 63/105 (60.00%), Query Frame = 2 Query: 62 LFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 +F +W +V+V D+ + Y+ + VPH++G+++ ++F K++ IVERL N+LM N G K + + V A +I++ T NPIQV+ DA+ N GPR Sbjct: 7 IFGKWDPTEVEVKDLGIKRYVSLTPV----IVPHSSGKHARQQFNKSEISIVERLANNLMRTETNTGKKQVTLRAVEEAFDIVNKKTKQNPIQVLVDAIANAGPR 107
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_METTH (30S ribosomal protein S7P OS=Methanobacterium thermoautotrophicum GN=rps7p PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.253e-13 Identity = 43/105 (40.95%), Postives = 61/105 (58.10%), Query Frame = 2 Query: 62 LFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 +F +W +V+V D+ L YI + + VPHT GR+ ++F K++ IVERL N +M RN+G K A IV A EII+ T NP+Q++ AV N PR Sbjct: 4 VFDKWELDEVKVEDMGLAKYICL----DSILVPHTMGRHVKRQFAKSKVSIVERLINKVMRTERNSGKKNKAYKIVQEAFEIINRRTKENPVQILVKAVENTSPR 104
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_METLZ (30S ribosomal protein S7P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps7p PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.253e-13 Identity = 41/105 (39.05%), Postives = 60/105 (57.14%), Query Frame = 2 Query: 62 LFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 LF +W +V V D + Y+ + + T VP + GR + ++F K++ IVERL N LM N G K+M +V A ++I+ T NP+QV+ DAV N GPR Sbjct: 12 LFNKWDMSEVVVKDAGMVRYVTITS----TEVPSSCGRLTQQQFTKSEMAIVERLINRLMQQEYNTGKKMMCTKMVMDAFDVINKKTKQNPLQVLVDAVANAGPR 112 The following BLAST results are available for this feature:
BLAST of CF832332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832332 ID=CF832332; Name=CF832332; organism=Citrus sinensis; type=EST; length=377bpback to top |