CF832339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PPR70_ARATH (Pentatricopeptide repeat-containing protein At1g33350 OS=Arabidopsis thaliana GN=PCMP-E57 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.093e-14 Identity = 35/98 (35.71%), Postives = 57/98 (58.16%), Query Frame = 1 Query: 1 GSLTIACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLE 294 GSL AC+IH L+L E+A ++ + + GY ++ NLY G W+E + R++++ + PG S +E+ EVH F S D HP+ +EI +L+ Sbjct: 436 GSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILD 533
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP268_ARATH (Putative pentatricopeptide repeat-containing protein At3g47840 OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14 Identity = 40/97 (41.24%), Postives = 60/97 (61.86%), Query Frame = 1 Query: 4 SLTIACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLE 294 +L IAC+ +E G AA I E D V L N+Y+++G +E A VR+ M+ KG+ +PG S +++K V AF+SGD FHPQ ++I ++LE Sbjct: 585 TLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP215_ARATH (Pentatricopeptide repeat-containing protein At3g05340 OS=Arabidopsis thaliana GN=PCMP-E83 PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14 Identity = 37/104 (35.58%), Postives = 59/104 (56.73%), Query Frame = 1 Query: 16 ACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGF 327 AC H E+GE AA +F+T ++L+ N+Y++ GKW E AK + M+ G+T + G S +E++ + H+F+ D HPQ + I VL G + M G+ Sbjct: 535 ACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGY 638
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP371_ARATH (Pentatricopeptide repeat-containing protein At5g08510 OS=Arabidopsis thaliana GN=PCMP-E20 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.039e-13 Identity = 41/106 (38.68%), Postives = 66/106 (62.26%), Query Frame = 1 Query: 1 GSLTIACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSW-VEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMK 315 G+L AC H +E+ E+A+ +F+ + + G V++ N+YAA+ KWD V ++R+LM+++ +T G S+ VEV +VH F D HP+ EI VLE + +MK Sbjct: 389 GTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMK 494
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP189_ARATH (Pentatricopeptide repeat-containing protein At2g36980, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E73 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.357e-13 Identity = 37/100 (37.00%), Postives = 57/100 (57.00%), Query Frame = 1 Query: 16 ACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMK 315 AC H ELG + + + +VLL NLY ++G+W E VRR M E+G+ PGCSW+EV +V F+ GD+ HP+++E++ L +M+ Sbjct: 519 ACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQHEMR 618
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP169_ARATH (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.357e-13 Identity = 39/108 (36.11%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 1 GSLTIACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVG 324 G+L CR+H +ELGE AA + E D G YVLL +Y + W++ + RR+M E+G+ PGCS +EV G V F+ D P+ ++I Y+++ +G Sbjct: 562 GALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKI-------YDRLHCLG 662
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP192_ARATH (Pentatricopeptide repeat-containing protein At2g37320 OS=Arabidopsis thaliana GN=PCMP-E50 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.158e-13 Identity = 40/105 (38.10%), Postives = 58/105 (55.24%), Query Frame = 1 Query: 1 GSLTIACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMK 315 GSL +CR+H + G AA + +V L NLYA+ G W E A VR+LM++KGL +PGCSW+E+ V F + D + ++ EI VL + M+ Sbjct: 394 GSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHCLIDHME 498
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP414_ARATH (Pentatricopeptide repeat-containing protein At5g42450, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E102 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.737e-13 Identity = 36/91 (39.56%), Postives = 52/91 (57.14%), Query Frame = 1 Query: 19 CRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVL 291 C+IH L +LAA I E D R V YV+L N Y+A W V+ +RR M+E GL GCSW+EV+ ++ F++ D + E+ +L Sbjct: 411 CQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRML 501
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP315_ARATH (Pentatricopeptide repeat-containing protein At4g16470 OS=Arabidopsis thaliana GN=PCMP-E12 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.737e-13 Identity = 40/87 (45.98%), Postives = 52/87 (59.77%), Query Frame = 1 Query: 1 GSLTIACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFH 261 GSL ACRIH ++L ELAA E D + G YV+ N YA+ G + +KVRR M G+ DPG S +E++GEVH F+ D H Sbjct: 382 GSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSH 468
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PPR47_ARATH (Putative pentatricopeptide repeat-containing protein At1g17630 OS=Arabidopsis thaliana GN=PCMP-E72 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.799e-13 Identity = 38/108 (35.19%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 1 GSLTIACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVG 324 G+L +CR+H+ +++ E A + + G Y+LL N+Y+A G+W+E A VR L ++K L G SW+EVK + + F SG + + I VLE M G Sbjct: 607 GALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKG 714 The following BLAST results are available for this feature:
BLAST of CF832339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 128
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832339 ID=CF832339; Name=CF832339; organism=Citrus sinensis; type=EST; length=692bpback to top |