CF832339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP431_ARATH (Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.922e-16 Identity = 40/98 (40.82%), Postives = 58/98 (59.18%), Query Frame = 1 Query: 4 SLTIACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGE--VHAFLSGDNFHPQIKEINSVL 291 SL +C R EL + + + E++ + G YV + N YA G WDEV K+R +M+ KGL PGCSW+++ GE VH F++ D H +I EI +L Sbjct: 721 SLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMML 818
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP231_ARATH (Pentatricopeptide repeat-containing protein At3g14730 OS=Arabidopsis thaliana GN=PCMP-E31 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.922e-16 Identity = 42/117 (35.90%), Postives = 66/117 (56.41%), Query Frame = 1 Query: 4 SLTIACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGFAGSEYVSMD 354 S+ +CR+H +L +A + E + H G YVL+ N+Y +GK++EV VR MR++ + PGCSW+ +K VH F +G+ HP+ K I+ L M G EY+++D Sbjct: 541 SILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHMH-----GHEYMTVD 652
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP220_ARATH (Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.817e-16 Identity = 41/104 (39.42%), Postives = 64/104 (61.54%), Query Frame = 1 Query: 4 SLTIACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMK 315 SL ACRIH GE++A + E + ++ YVLL N+YA+ G W++ +R++MR++G+ PG SW++V+ H F +GD H +I +I LE Y+ MK Sbjct: 907 SLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMK 1010
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP207_ARATH (Pentatricopeptide repeat-containing protein At3g02330 OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.817e-16 Identity = 49/124 (39.52%), Postives = 68/124 (54.84%), Query Frame = 1 Query: 19 CRIHRW-LELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGFAGSEYVSMDKSEASKAEIFC 387 C IHR +E+ E A + D + Y LL N+YA +G W++V+ +RR MR L +PGCSWVE+K E+H FL GD HP+ +EI L Y +MK F S +V + E +C Sbjct: 782 CTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKP--FDDSSFVRGVEVEEEDQWCYC 903
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP246_ARATH (Pentatricopeptide repeat-containing protein At3g22150, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16 Identity = 47/111 (42.34%), Postives = 63/111 (56.76%), Query Frame = 1 Query: 1 GSLTIACRIHRWLELGELAAGHI--FETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGF 327 GSL +C++H LEL E + + F+ GY VLL N+YA KW V KVRR MREKGL + G S +E+ G V+ F+S D HP EI V++G + M+ F Sbjct: 695 GSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMRGDSF 805
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP346_ARATH (Pentatricopeptide repeat-containing protein At4g32450, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H63 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.450e-15 Identity = 44/121 (36.36%), Postives = 64/121 (52.89%), Query Frame = 1 Query: 244 SGDNFHPQIKEINSVLEGFYEKMKAVGFAGSEYVSM-DKSEASKAEIFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 603 +GD P+ +E+ L+ E M +G+ +++ D + SK E H+E A ++T I V KNL C CHN +K +SKIV R++ RD + FHH KDG CSC + YW Sbjct: 419 AGDISRPENRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCRE--YW 537
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP205_ARATH (Putative pentatricopeptide repeat-containing protein At3g01580 OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 5.511e-15 Identity = 36/105 (34.29%), Postives = 64/105 (60.95%), Query Frame = 1 Query: 1 GSLTIACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMK 315 G+L ACRIH+ E+ E A +FE ++ H GYY+L+ N+Y G+W+ V K+R ++++G+ S +E++ +VH F++ D HP+ + + +L+ MK Sbjct: 540 GTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMK 644
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PPR75_ARATH (Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.198e-15 Identity = 37/88 (42.05%), Postives = 57/88 (64.77%), Query Frame = 1 Query: 1 GSLTIACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHP 264 G+L +C +H+ ELG+ AA + + H G Y LL NLY+ S WDEVA+VR+ M+++ + PG SW+EVKG++ F++ D+ P Sbjct: 479 GALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKP 566
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP433_ARATH (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14 Identity = 39/98 (39.80%), Postives = 60/98 (61.22%), Query Frame = 1 Query: 1 GSLTIACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLE 294 GSL A +H LELGE A + + + + G Y+LL NLY+ G+WDE +R +M+ G+ G S +EV+ V+ F+SGD HPQ++ I+ +L+ Sbjct: 423 GSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQ 520
BLAST of CF832339 vs. ExPASy Swiss-Prot
Match: PP165_ARATH (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.735e-14 Identity = 40/100 (40.00%), Postives = 62/100 (62.00%), Query Frame = 1 Query: 1 GSLTIACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGF 300 GSL +CR L++ +A H+ E + +G YVLL N+YA GKW++V+++R+++R + + PG S +EV V F+SGDN P EI+ VL+ F Sbjct: 414 GSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQLF 513 The following BLAST results are available for this feature:
BLAST of CF832339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 128
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832339 ID=CF832339; Name=CF832339; organism=Citrus sinensis; type=EST; length=692bpback to top |