CF832341
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_VITRI (60S ribosomal protein L10 OS=Vitis riparia GN=RPL10 PE=2 SV=1) HSP 1 Score: 342.813 bits (878), Expect = 7.002e-94 Identity = 161/178 (90.45%), Postives = 169/178 (94.94%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCH 574 +PDPKIRIYDVGMKKKG D+FPFCVHLVSWEKEN SSEALEAARIACNKYM AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV+IGQVLLSVRCKD NSHHA EALRRAKFKFP RQKIIVSRKWGFTKF+R DY++WKS+NRI+PDGVNAKLLGCH Sbjct: 26 VPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPARQKIIVSRKWGFTKFNRTDYIKWKSQNRILPDGVNAKLLGCH 203
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_SOLME (60S ribosomal protein L10 OS=Solanum melongena GN=RPL10 PE=2 SV=1) HSP 1 Score: 338.576 bits (867), Expect = 1.320e-92 Identity = 163/182 (89.56%), Postives = 169/182 (92.86%), Query Frame = 2 Query: 29 FAAVLPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCH 574 F +PDPKIRIYDVGMK+KG D+FPFCVHLVSWEKEN SSEALEAARIACNKYM AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQG CARVAIGQVLLSVRCKD NS+HA EALRRAKFKFPGRQKIIVSRKWGFTKFSR DYL++KSENRIVPDGVNAKLLG H Sbjct: 22 FCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDGNSNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTDYLKYKSENRIVPDGVNAKLLGNH 203
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_EUPES (60S ribosomal protein L10 OS=Euphorbia esula GN=RPL10 PE=2 SV=1) HSP 1 Score: 337.421 bits (864), Expect = 2.942e-92 Identity = 163/182 (89.56%), Postives = 169/182 (92.86%), Query Frame = 2 Query: 29 FAAVLPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCH 574 F +PDPKIRIYDVGMKKKG D+FPFCVHLVSWEKEN SSEALEAARIACNKYM AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQG CARVAIGQVLLSVRCKD+NSH+A EALRRAKFKFPGRQKIIVSRKWGFTK +RADY R KSENRI+PDGVNAKLLGCH Sbjct: 22 FCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDNNSHNAQEALRRAKFKFPGRQKIIVSRKWGFTKINRADYPRLKSENRILPDGVNAKLLGCH 203
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL102_ARATH (60S ribosomal protein L10-2 OS=Arabidopsis thaliana GN=RPL10B PE=2 SV=2) HSP 1 Score: 324.709 bits (831), Expect = 1.973e-88 Identity = 153/178 (85.96%), Postives = 163/178 (91.57%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCH 574 +PDPKIRIYDVGMK+KG D+FP+CVHLVSWEKEN SSEALEAARIACNKYM AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFGK GTCARVAIGQVLLSVRCKD++ HHA EALRRAKFKFPGRQKIIVSRKWGFTKF+RADY + + E RIVPDGVNAK L CH Sbjct: 26 VPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRADYTKLRQEKRIVPDGVNAKFLSCH 203
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL101_ARATH (60S ribosomal protein L10-1 OS=Arabidopsis thaliana GN=RPL10A PE=2 SV=1) HSP 1 Score: 323.939 bits (829), Expect = 3.366e-88 Identity = 152/178 (85.39%), Postives = 163/178 (91.57%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCH 574 +PDPKIRIYDVGMK+KG D+FPFCVHLVSWEKEN SSEALEAARIACNKYM AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFGK GTCARVAIGQVLLSVRCKD++ HHA EALRRAKFKFPGRQKIIVSRKWGFTKF+RAD+ + + E R+VPDGVNAK L CH Sbjct: 26 VPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRADFTKLRQEKRVVPDGVNAKFLSCH 203
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_MAIZE (60S ribosomal protein L10 OS=Zea mays GN=RPL10 PE=2 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 4.396e-88 Identity = 155/178 (87.08%), Postives = 164/178 (92.13%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCH 574 +PDPKIRIYDVGMK+KG D+FP+CVHLVSWE+EN SSEALEAARI CNKYM AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCKD+N+ HA EALRRAKFKFP RQKII SRKWGFTKFSRADYL++KSE RIVPDGVNAKLL H Sbjct: 26 VPDPKIRIYDVGMKRKGVDEFPYCVHLVSWERENVSSEALEAARIVCNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNAAHASEALRRAKFKFPARQKIIESRKWGFTKFSRADYLKYKSEGRIVPDGVNAKLLANH 203
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL102_ORYSJ (60S ribosomal protein L10-2 OS=Oryza sativa subsp. japonica GN=SG12 PE=2 SV=1) HSP 1 Score: 321.242 bits (822), Expect = 2.182e-87 Identity = 155/178 (87.08%), Postives = 163/178 (91.57%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCH 574 +PDPKIRIYDVGMKKKG D+F CVHLVSWEKEN +SEALEAARIACNKYM AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCK +N+ HA EALRRAKFKFPGRQKII SRKWGFTKFSR +Y+R KSE RI+PDGVNAKLLGCH Sbjct: 26 VPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGFTKFSRDEYVRLKSEGRIMPDGVNAKLLGCH 203
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL102_ORYSI (60S ribosomal protein L10-2 OS=Oryza sativa subsp. indica GN=SG12 PE=2 SV=2) HSP 1 Score: 321.242 bits (822), Expect = 2.182e-87 Identity = 155/178 (87.08%), Postives = 163/178 (91.57%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCH 574 +PDPKIRIYDVGMKKKG D+F CVHLVSWEKEN +SEALEAARIACNKYM AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCK +N+ HA EALRRAKFKFPGRQKII SRKWGFTKFSR +Y+R KSE RI+PDGVNAKLLGCH Sbjct: 26 VPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGFTKFSRDEYVRLKSEGRIMPDGVNAKLLGCH 203
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL101_ORYSJ (60S ribosomal protein L10-1 OS=Oryza sativa subsp. japonica GN=SC34 PE=2 SV=1) HSP 1 Score: 318.931 bits (816), Expect = 1.083e-86 Identity = 152/178 (85.39%), Postives = 165/178 (92.70%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCH 574 +PDPKIRIYDVGMKKKG D+FP+CVHLVSWEKEN SSEALEAARIACNKYM +AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCK+SN+ HA EALRRAKFKFPGRQKII SRKWGFTKF+R +Y++ K+E RI+ DGVNA+LLG H Sbjct: 26 VPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFTREEYVKLKAEGRIMSDGVNAQLLGSH 203
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL101_ORYSI (60S ribosomal protein L10-1 OS=Oryza sativa subsp. indica GN=SC34 PE=2 SV=2) HSP 1 Score: 318.931 bits (816), Expect = 1.083e-86 Identity = 152/178 (85.39%), Postives = 165/178 (92.70%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCH 574 +PDPKIRIYDVGMKKKG D+FP+CVHLVSWEKEN SSEALEAARIACNKYM +AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCK+SN+ HA EALRRAKFKFPGRQKII SRKWGFTKF+R +Y++ K+E RI+ DGVNA+LLG H Sbjct: 26 VPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFTREEYVKLKAEGRIMSDGVNAQLLGSH 203 The following BLAST results are available for this feature:
BLAST of CF832341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832341 ID=CF832341; Name=CF832341; organism=Citrus sinensis; type=EST; length=574bpback to top |