CF832355
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RSSA_SCLS1 (40S ribosomal protein S0 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=rps0 PE=3 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.083e-67 Identity = 125/204 (61.27%), Postives = 155/204 (75.98%), Query Frame = 3 Query: 12 RLPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 620 +LP + DI+ +LAA+ HLG+KN ME Y++K R DGI +IN+GKTWEK+ +AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+I+TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+HSIG ++W+LAR VL++RG+I +WD MVDL+FYR Sbjct: 5 QLPAIFNPTSQDIEQLLAAQCHLGSKNLQVHMEPYLWKTRPDGINVINIGKTWEKIVLAARIIAAIDNPADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHSIGLVWWMLAREVLRLRGSIASREAEWDTMVDLYFYR 208
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RSSA_EMENI (40S ribosomal protein S0 OS=Emericella nidulans GN=rps0 PE=3 SV=2) HSP 1 Score: 256.144 bits (653), Expect = 1.415e-67 Identity = 124/204 (60.78%), Postives = 156/204 (76.47%), Query Frame = 3 Query: 12 RLPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 620 +LP + DI+M+LAA+ HLG+KN ME Y++K R DG+ +IN+GKTWEK+ +AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+++TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+H+IG ++WLLAR VL++RGT+ WDV+VDL+FYR Sbjct: 5 QLPPIFNPTPQDIEMLLAAQCHLGSKNLQVHMEPYLWKTRPDGVNVINVGKTWEKILLAARIIAAIDNPADICVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYITRSFKEPRLIVVTDPRTDAQAIKEASYVNIPVIALCDTDSPTDFVDVAIPTNNKGRHAIGLIWWLLAREVLRLRGTLANREVDWDVVVDLYFYR 208
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RSSA_CHAGB (40S ribosomal protein S0 OS=Chaetomium globosum GN=RPS0 PE=3 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.415e-67 Identity = 123/203 (60.59%), Postives = 154/203 (75.86%), Query Frame = 3 Query: 15 LPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMVDLFFYR 620 LP + DI+ +LAA+ H+G+KN M+ Y++K R DG+ +IN+GKTWEK+ +AAR+I AI+NP D+ V SARPYGQRAVLKFA +T A AIAGR TPG+FTN + SF EPRL+I+TDPRTD Q IKEA+ NIP IA CDTDSP YVD+ IP NNKG+HSIG ++W+LAR VL++RGTI WDVM DL+FYR Sbjct: 6 LPSIFNATSTDIEQLLAAQCHVGSKNLGVNMQPYLWKTRADGVNVINIGKTWEKITLAARIIAAIDNPSDVCVISARPYGQRAVLKFAAHTGAQAIAGRFTPGSFTNYITRSFKEPRLIIVTDPRTDSQAIKEASYVNIPVIALCDTDSPTEYVDVAIPTNNKGRHSIGLVWWMLAREVLRLRGTIYNRETPWDVMPDLYFYR 208
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RSSA_BOTFB (40S ribosomal protein S0 OS=Botryotinia fuckeliana (strain B05.10) GN=rps0 PE=3 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.415e-67 Identity = 125/204 (61.27%), Postives = 154/204 (75.49%), Query Frame = 3 Query: 12 RLPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 620 +LP + DI+ +LAA+ HLG KN ME Y++K R DGI +IN+GKTWEK+ +AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+I+TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+HSIG ++W+LAR VL++RG+I +WD MVDL+FYR Sbjct: 5 QLPAIFNPTSQDIEQLLAAQCHLGAKNLQVHMEPYLWKTRPDGINVINIGKTWEKIVLAARIIAAIDNPADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHSIGLVWWMLAREVLRLRGSIASREAEWDTMVDLYFYR 208
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RSSA_PODAN (40S ribosomal protein S0 OS=Podospora anserina GN=RPS0 PE=3 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 2.414e-67 Identity = 123/203 (60.59%), Postives = 154/203 (75.86%), Query Frame = 3 Query: 15 LPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMVDLFFYR 620 LP + DI+ +LAA+ H+G+KN + Y++K R DG+ IIN+GKTWEK+ +AAR+I AI+NP D+ V SARPYGQRAVLKFA +T A AIAGR TPG+FTN + SF EPRL+++TDPRTD Q IKEA+ NIP IA CDTDSP YVD+ IP NNKG+HSIG ++W+LAR VL++RGTI WDVMVDL+FYR Sbjct: 6 LPSIFNATSQDIEQLLAAQCHIGSKNLGVHAQPYLWKTRADGVNIINIGKTWEKIVLAARIIAAIDNPSDVCVISARPYGQRAVLKFAAHTGAQAIAGRFTPGSFTNYITRSFKEPRLIVVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEYVDVAIPTNNKGRHSIGLVWWMLAREVLRLRGTIYNREAPWDVMVDLYFYR 208
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RSSA_ASPOR (40S ribosomal protein S0 OS=Aspergillus oryzae GN=rps0 PE=3 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 3.152e-67 Identity = 122/204 (59.80%), Postives = 156/204 (76.47%), Query Frame = 3 Query: 12 RLPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 620 +LP + + DI+ +LAA+ HLG+KN ME Y++K R DG+ +IN+GKTWEK+ +AAR+I A+ENP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+I+TDPRTD Q IKEA+ NIP +A CDTDSP +VD+ IP NNKG+HSIG ++W+LAR VL++RGT+ +WDV+ DL+FYR Sbjct: 5 QLPPIFNPTQQDIEQLLAAQCHLGSKNLQVHMEPYLWKTRPDGVNVINIGKTWEKILLAARIIAAVENPADICVISARPYGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDSQAIKEASYVNIPVLALCDTDSPTDFVDVAIPTNNKGRHSIGLVWWMLAREVLRLRGTLATRETEWDVVPDLYFYR 208
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RSSA_ASPFN (40S ribosomal protein S0 OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=rps0 PE=3 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 3.152e-67 Identity = 122/204 (59.80%), Postives = 156/204 (76.47%), Query Frame = 3 Query: 12 RLPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 620 +LP + + DI+ +LAA+ HLG+KN ME Y++K R DG+ +IN+GKTWEK+ +AAR+I A+ENP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+I+TDPRTD Q IKEA+ NIP +A CDTDSP +VD+ IP NNKG+HSIG ++W+LAR VL++RGT+ +WDV+ DL+FYR Sbjct: 5 QLPPIFNPTQQDIEQLLAAQCHLGSKNLQVHMEPYLWKTRPDGVNVINIGKTWEKILLAARIIAAVENPADICVISARPYGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDSQAIKEASYVNIPVLALCDTDSPTDFVDVAIPTNNKGRHSIGLVWWMLAREVLRLRGTLATRETEWDVVPDLYFYR 208
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RSSA_PLAKH (40S ribosomal protein SA OS=Plasmodium knowlesi (strain H) GN=PKH_061110 PE=3 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 5.377e-67 Identity = 120/197 (60.91%), Postives = 152/197 (77.16%), Query Frame = 3 Query: 30 SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 620 S KE I ML +VH+GTKN + +M+RYV+ R DG++I+NL KT+EKLQ+AAR+IVAI NP D++V SARP+G RAVLKFA+YT A AIAGR TPG TNQ+ F EPRLLI+TDPRTD QP+KE+A NIP IA CD+DSP+ +VDI IP NNKGK SI ++WLLA+ VL ++GT+ W+VMVD+F +R Sbjct: 9 SPKEESIAKMLICKVHIGTKNLENKMKRYVYTRAKDGVHILNLAKTYEKLQLAARIIVAINNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTNQIIQKFTEPRLLIVTDPRTDAQPVKESAYANIPVIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVLYLKGTLPRSKPWNVMVDMFLWR 205
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RSSA_PENCW (40S ribosomal protein S0 OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=rps0 PE=3 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 5.377e-67 Identity = 121/204 (59.31%), Postives = 156/204 (76.47%), Query Frame = 3 Query: 12 RLPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 620 +LP + DI+M+LAA+ HLG+KN ME Y++K R DG+ ++N+GKTWEK+ +AAR+I AI+NP D+ V SARPYGQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+I+TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+H+IG ++W+LAR VL++RGT+ +WD +VDL+FYR Sbjct: 5 QLPPVFNPTAQDIEMLLAAQCHLGSKNLQVHMEPYLWKLRADGVNVLNIGKTWEKIVLAARIIAAIDNPADVCVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTDFVDVAIPTNNKGRHAIGLVWWMLAREVLRLRGTLATRETEWDTVVDLYFYR 208
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RSSA_CULQU (40S ribosomal protein SA OS=Culex quinquefasciatus GN=CPIJ013899 PE=3 SV=2) HSP 1 Score: 254.218 bits (648), Expect = 5.377e-67 Identity = 122/198 (61.62%), Postives = 153/198 (77.27%), Query Frame = 3 Query: 27 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 620 L+ K+ D+ MLAA H+G+ + +FQME YVFKRR DG++IINLG+TWEKL +AAR I +IE PG++ S+R +GQRAVLKFA YT A IAGR TPG FTNQ+Q +F EPRLLI+TDP TDHQP+ EA+ NIP IAFC+TDSP+++VDI IP N K HSIG ++WLLAR VL++RG I KW++ DLFFYR Sbjct: 8 LALKDDDVNKMLAATTHVGSTSVNFQMESYVFKRRPDGVHIINLGRTWEKLLLAARCIASIEYPGEVFAISSRQFGQRAVLKFAHYTEATPIAGRFTPGAFTNQIQPAFREPRLLIVTDPLTDHQPVTEASYVNIPVIAFCNTDSPLKFVDIAIPCNTKSPHSIGLMWWLLAREVLKLRGKI--SDKWELKPDLFFYR 203 The following BLAST results are available for this feature:
BLAST of CF832355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832355 ID=CF832355; Name=CF832355; organism=Citrus sinensis; type=EST; length=743bpback to top |