CF832365

Overview
NameCF832365
Unique NameCF832365
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1010 contig Csv1_Contig1010:1..732. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME_DAUCA (Pectinesterase OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.868e-62
Identity = 121/218 (55.50%), Postives = 154/218 (70.64%), Query Frame = 2
Query:   71 LTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            + V ADG+GD+ T+++A+  AP +S  R VI IK GVY EN+++P  K NI  LG G+ STIIT S++V DG TTF SATVA  G  FLARD+T +N AG  K+QAVALRV +D +A +RC    YQD+LYVHS RQF+  C + GT+D+IFGNAAVVLQ C+I +R P  GQ  ++TAQ + DPN+NTGI IQ   I AT DL    +S  +YLGRP
Sbjct:    9 VVVAADGSGDYKTVSEAVAAAPEDSKTRYVIRIKAGVYRENVDVPKKKKNIMFLGDGRTSTIITASKNVQDGSTTFNSATVAAVGAGFLARDITFQNTAGAAKHQAVALRVGSDLSAFYRCDILAYQDSLYVHSNRQFFINCFIAGTVDFIFGNAAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRP 226          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 5.052e-62
Identity = 127/241 (52.70%), Postives = 159/241 (65.98%), Query Frame = 2
Query:    2 LSRTDRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            LS  DRR+LQSS        +  + V ADG+G+F T+  ++  AP     R +I IK GVY EN+E+     NI  +G G+  TIIT SR+V DG TTF+SATVAV G+ FLARD+T +N AGP K+QAVALRV AD +A + C    YQDTLYVHS RQF+  C + GT+D+IFGNAA VLQ C+I +R P  GQ  ++TAQ + DPN+NTGI IQ   I AT DL     S  +YLGRP
Sbjct:  257 LSTGDRRLLQSSS------VTPNVVVAADGSGNFKTVAASVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRP 491          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME47_ARATH (Probable pectinesterase/pectinesterase inhibitor 47 OS=Arabidopsis thaliana GN=PME47 PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 8.617e-62
Identity = 120/223 (53.81%), Postives = 155/223 (69.51%), Query Frame = 2
Query:   65 QVLTVDADGTGDFTTITDAINFAPNNS---DDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            + +TV    T +F TIT+A+  APN++       VI  + G+YEE + I + K NI L+G G + TII+ + S  DGWTT+ S+T AV GDRF+A D+T  N AGPEK+QAVA+R NAD +  +RCSF GYQDTLYVHS RQFYRECD+YGTID+IFGNAA + Q CNI +R P+  Q   +TA  + DPN+ TGISI NC+I A  DL A+  S  ++LGRP
Sbjct:  306 EAVTVGPYETDNFPTITEAVAAAPNHTFPEQGYFVIYARAGLYEEYVVISNKKRNIMLIGDGINKTIISGNHSFIDGWTTYNSSTFAVVGDRFVAVDVTFRNTAGPEKHQAVAVRNNADGSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTIDFIFGNAAAIFQNCNIYARKPMANQKNAVTAHGRTDPNQKTGISIINCTIGAAPDLAADPKSTMTFLGRP 528          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.125e-61
Identity = 127/241 (52.70%), Postives = 157/241 (65.15%), Query Frame = 2
Query:    2 LSRTDRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            LS  DRR+LQSS        +    V ADG+G+F T+  A+  AP     R +I IK GVY EN+E+     NI  +G G+  TIIT SR+V DG TTF+SAT AV G+ FLARD+T +N AGP K+QAVALRV AD +A + C    YQDTLYVHS RQF+  C + GT+D+IFGNAA VLQ C+I +R P  GQ  ++TAQ + DPN+NTGI IQ   I AT DL     S  +YLGRP
Sbjct:  257 LSPGDRRLLQSSS------VTPNAVVAADGSGNFKTVAAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATAAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRP 491          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2)

HSP 1 Score: 230.335 bits (586), Expect = 8.065e-60
Identity = 129/239 (53.97%), Postives = 155/239 (64.85%), Query Frame = 2
Query:   14 DRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRPLR 730
            DR++LQSS   +         V  DG+G+F TI +AI+ A  +   R VI +KQGVY ENLEI   K N+ L G G   TIIT S+SVG G TTF SATVA  GD F+AR +T  N AG    QAVALR  +D +  ++CSF  YQDTLYVHS RQFYR+CDVYGT+D+IFGNAA VLQ CNI +R P   +   ITAQ + DPN+NTGI I N  + A  DL     S K+YLGRP R
Sbjct:  194 DRKLLQSSTPKDN------AVVAKDGSGNFKTIKEAIDAASGSG--RFVIYVKQGVYSENLEIR--KKNVMLRGDGIGKTIITGSKSVGGGTTTFNSATVAAVGDGFIARGITFRNTAGASNEQAVALRSGSDLSVFYQCSFEAYQDTLYVHSNRQFYRDCDVYGTVDFIFGNAAAVLQNCNIFARRP-RSKTNTITAQGRSDPNQNTGIIIHNSRVTAASDLRPVLGSTKTYLGRPWR 421          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.917e-59
Identity = 114/241 (47.30%), Postives = 154/241 (63.90%), Query Frame = 2
Query:    2 LSRTDRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            L   +RR+L+  ++D+  D      V  DG+G F TI +A+      S++R  + +K+G Y EN+++     N+ + G GKD T +  SR+  DG  TF +AT AV G  F+A+D+   N AG  K+QAVALR  +D +  FRCSF G+QDTLY HS RQFYR+CD+ GTID+IFGNAAVV Q+C I+ R PLP QF  ITAQ K DPN+NTGI IQ  +I      + N+ +  +YLGRP
Sbjct:  255 LGAAERRLLEEKNNDSTPDA----VVAKDGSGQFKTIGEALKLVKKKSEERFSVYVKEGRYVENIDLDKNTWNVMIYGDGKDKTFVVGSRNFMDGTPTFETATFAVKGKGFIAKDIGFVNNAGASKHQAVALRSGSDRSVFFRCSFDGFQDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQSCKIMPRQPLPNQFNTITAQGKKDPNQNTGIIIQKSTITP----FGNNLTAPTYLGRP 487          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.594e-58
Identity = 116/242 (47.93%), Postives = 163/242 (67.36%), Query Frame = 2
Query:   11 TDRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPN--NSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRPLR 730
            +DR++L+ S    + D    L V  DG+G +T+I  A+N A      + R+VI +K GVY EN+ I     N+ ++G G DSTI+T +R+V DG TTFRSAT AVSG+ F+A+ +T EN AGPEK+QAVALR ++DF+  + CSF GYQDTLY+HS RQF R C++YGT+D+IFG+A  +LQ CNI +R P+ GQ   ITAQ + +P+E TG  IQ+ ++         + + ++YLGRP R
Sbjct:  235 SDRKLLEDSKTTAKAD----LVVAKDGSGHYTSIQQAVNAAAKLPRRNQRLVIYVKAGVYRENVVIKKSIKNVMVIGDGIDSTIVTGNRNVQDGTTTFRSATFAVSGNGFIAQGITFENTAGPEKHQAVALRSSSDFSVFYACSFKGYQDTLYLHSSRQFLRNCNIYGTVDFIFGDATAILQNCNIYARKPMSGQKNTITAQSRKEPDETTGFVIQSSTV---------ATASETYLGRPWR 463          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5)

HSP 1 Score: 223.402 bits (568), Expect = 9.859e-58
Identity = 118/241 (48.96%), Postives = 159/241 (65.98%), Query Frame = 2
Query:    2 LSRTDRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            +S  DR++++SS  D   +      V  DGTGD+ T+ +A+  AP+ S  R VI +K+G Y+EN+E+ S K N+ ++G G  +T IT S +V DG TTFRSAT+A  G  F+ +D+ I+N AGP K QAVALRV AD + + RC    YQDTLY HS RQFYR+  V GT+D+IFGNAAVV Q C +V+R P   Q  ++TAQ + DPN+ TG SIQ C+I+A+ DL        +YLGRP
Sbjct:  215 VSSMDRKLMESSGKDIIANA----VVAQDGTGDYQTLAEAVAAAPDKSKTRYVIYVKRGTYKENVEVASNKMNLMIVGDGMYATTITGSLNVVDGSTTFRSATLAAVGQGFILQDICIQNTAGPAKDQAVALRVGADMSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRP 451          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 3.746e-57
Identity = 118/241 (48.96%), Postives = 158/241 (65.56%), Query Frame = 2
Query:    2 LSRTDRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            +S  DR++++SS  D   +      V  DGTG + T+ +A+  AP+ S  R VI +K+G Y+EN+E+ S K N+ ++G G  +TIIT S +V DG TTF SAT+A  G  F+ +D+ I+N AGP K+QAVALRV AD + + RC    YQDTLY HS RQFYR+  V GTID+IFGNAAVV Q C +V+R P   Q  ++TAQ + DPN+ TG SIQ C I+A+ DL        +YLGRP
Sbjct:  219 VSSRDRKLMESSGKDIGANA----VVAKDGTGKYRTLAEAVAAAPDKSKTRYVIYVKRGTYKENVEVSSRKMNLMIIGDGMYATIITGSLNVVDGSTTFHSATLAAVGKGFILQDICIQNTAGPAKHQAVALRVGADKSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCDIIASPDLKPVVKEFPTYLGRP 455          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.390e-57
Identity = 119/243 (48.97%), Postives = 156/243 (64.20%), Query Frame = 2
Query:    2 LSRTDRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNN--SDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            LSR D+R+L++   +        L V  DG+G F T+  AI+ A     +  R VI +K+G+Y+EN+ +     +I L+G G  STIIT  RSV  G+TT+ SAT  + G  F+A+ +T  N AGP K QAVALR ++D +  ++CS  GYQDTL VHS RQFYREC +YGT+D+IFGNAA V Q C I+ R PL GQ  VITAQ + DP +NTGISI N  IL   DL     +VK+Y+GRP
Sbjct:  207 LSRKDKRLLRAVRAN--------LVVAKDGSGHFNTVQAAIDVAGRRKVTSGRFVIYVKRGIYQENINVRLNNDDIMLVGDGMRSTIITGGRSVQGGYTTYNSATAGIEGLHFIAKGITFRNTAGPAKGQAVALRSSSDLSIFYKCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAAVFQNCLILPRRPLKGQANVITAQGRADPFQNTGISIHNSRILPAPDLKPVVGTVKTYMGRP 441          
The following BLAST results are available for this feature:
BLAST of CF832365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME_DAUCA3.868e-6255.50Pectinesterase OS=Daucus carota PE=1 SV=1[more]
PME3_CITSI5.052e-6252.70Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME47_ARATH8.617e-6253.81Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME1_CITSI1.125e-6152.70Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PME17_ARATH8.065e-6053.97Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME3_PHAVU8.917e-5947.30Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]
PME6_ARATH2.594e-5847.93Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME1_SOLLC9.859e-5848.96Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9... [more]
PME21_SOLLC3.746e-5748.96Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2... [more]
PME59_ARATH6.390e-5748.97Probable pectinesterase/pectinesterase inhibitor 5... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01M01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832365 ID=CF832365; Name=CF832365; organism=Citrus sinensis; type=EST; length=732bp
GTTGTCAAGAACAGATCGCCGGATTCTGCAGAGCTCCGATGACGATAATG
AGTATGACCAGAGTCAAGTACTGACTGTGGATGCCGATGGAACAGGAGAT
TTCACTACCATCACTGATGCGATAAATTTTGCTCCCAATAACAGCGATGA
TAGAGTAGTCATCAATATCAAACAAGGGGTTTATGAGGAGAATTTGGAAA
TTCCAAGCTATAAGACCAACATTTTTCTGCTTGGAGGCGGTAAAGATTCA
ACTATCATCACCAGAAGCAGAAGTGTGGGCGATGGCTGGACCACTTTCAG
ATCTGCAACAGTAGCTGTGTCCGGAGACCGGTTTCTGGCACGGGACCTAA
CAATTGAGAACAAGGCAGGGCCAGAGAAGTACCAAGCGGTTGCCTTAAGA
GTGAATGCAGATTTTGCAGCCTTGTTCAGATGCAGCTTCTCTGGTTACCA
AGATACGTTATATGTACACTCATTTCGTCAGTTTTATCGAGAGTGCGACG
TATACGGAACCATAGACTACATATTTGGTAACGCTGCAGTGGTTCTCCAG
GCATGTAACATCGTATCTAGACTGCCATTGCCAGGGCAATTCACAGTCAT
CACAGCACAATTAAAAGACGACCCGAATGAAAACACTGGAATCTCAATCC
AAAATTGTTCAATTTTGGCTACTGAAGATCTGTATGCAAATTCTGCAAGT
GTTAAAAGTTACCTAGGCAGGCCCTTGAGGAT
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