CF832365
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME63_ARATH (Putative pectinesterase 63 OS=Arabidopsis thaliana GN=PME63 PE=3 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.644e-20 Identity = 67/205 (32.68%), Postives = 107/205 (52.20%), Query Frame = 2 Query: 77 VDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKA----GPEK-YQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQ-FTVITAQLKDDPNENTGISIQNCSILAT 673 V +G G F TIT+AIN + RV+I I GVY+E + I K I L G ++T + + T SAT+ V D F+A ++ ++N A G K QA+++R++ + AA + C F GYQDT+ + F+++C + GT D+IFG+ ++ + ++L + G VITA E +G S +C + T Sbjct: 45 VKQNGRGHFKTITEAINSVRAGNTRRVIIKIGPGVYKEKVTIDRSKPFITLYGHPNAMPVLTFDGTAAQ-YGTVDSATLIVLSDYFMAVNIILKNSAPMPDGKRKGAQALSMRISGNKAAFYNCKFYGYQDTICDDTGNHFFKDCYIEGTFDFIFGSG----RSLYLGTQLNVVGDGIRVITAHAGKSAAEKSGYSFVHCKVTGT 244
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PPME1_ARATH (Pectinesterase PPME1 OS=Arabidopsis thaliana GN=PPME1 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.804e-20 Identity = 64/209 (30.62%), Postives = 110/209 (52.63%), Query Frame = 2 Query: 65 QVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKA----GPEK-YQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQ-FTVITAQLKDDPNENTGISIQNCSILAT 673 +++ V+ G G+F T+TDAI P + RV+I + G Y+E + I K I L+G +IT + + T SA++ + D F+A ++ ++N A G K QA+++R++ +FAA + C F G+QDT+ + F+++C V GT D+IFG+ + + ++L + G VI A E +G S +C + T Sbjct: 65 RIINVNPKG-GEFKTLTDAIKSVPAGNTKRVIIKMAPGEYKEKVTIDRNKPFITLMGQPNAMPVITYDGTAAK-YGTVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGT----SMYLGTQLHVVGDGIRVIAAHAGKSAEEKSGYSFVHCKVTGT 267
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME48_ARATH (Probable pectinesterase 48 OS=Arabidopsis thaliana GN=PME48 PE=2 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 2.804e-20 Identity = 64/209 (30.62%), Postives = 109/209 (52.15%), Query Frame = 2 Query: 65 QVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKA----GPEK-YQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQ-FTVITAQLKDDPNENTGISIQNCSILAT 673 +++ V+ G G+F T+TDAI P + RV+I + G Y E + I K I L+G +IT + + T SA++ + D F+A ++ ++N A G K QA+++R++ +FAA + C F G+QDT+ + F+++C V GT D+IFG+ + + ++L + G VI A E +G S +C + T Sbjct: 65 RIINVNPKG-GEFKTLTDAIKSVPAGNTKRVIIKMAHGEYREKVTIDRNKPFITLMGQPNAMPVITYDGTAAK-YGTVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGT----SMYLGTQLHVVGDGIRVIAAHAGKSAEEKSGYSFVHCKVTGT 267
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME66_ARATH (Probable pectinesterase 66 OS=Arabidopsis thaliana GN=PME66 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.790e-17 Identity = 60/207 (28.99%), Postives = 96/207 (46.38%), Query Frame = 2 Query: 71 LTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAG------PEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPL---PGQFTVITAQLKDDPNENTGISIQNCSI 664 +TVD +G G+FTT+ AI+ + + + + + G+Y E + IP K I+L G G + T+I D T SAT D + +T +N E AVA R+ D + SF G QDTL+ R +Y+ C + G ID+IFG + + C + L + + ITA + P++ G +C++ Sbjct: 35 ITVDLNGGGNFTTVQSAIDSISPPNHNWIRVFTQNGIYREKVTIPKEKGFIYLQGKGIEQTVI----EYDDHQATDISATFTAFADDIVISGITFKNTYNIVPNNKREIVPAVAARMLGDRYVVTDSSFVGLQDTLFDGKGRHYYKRCIISGGIDFIFGYGQSLFKECTLNMTLGIYAPDNPYGTITAHQRPSPSDEGGFVFSDCTV 237
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME_ASPTU (Pectinesterase OS=Aspergillus tubingensis GN=pme1 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.003e-14 Identity = 61/224 (27.23%), Postives = 104/224 (46.43%), Query Frame = 2 Query: 77 VDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTI-------ITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFG-NAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724 V A GD+ TI+ A++ S + I I++G Y+E + IP+ + + G +D+T IT + ++ D +AT+ + +L I N G +QA+A+ A + C F+GYQDTL + Q Y + G +D+IFG +A C+I R+ ITA + ++++ I ++ A + +S + YLGRP Sbjct: 29 VVAKSGGDYDTISAAVDALSTTSTETQTIFIEEGSYDEQVYIPALSGKLIVYGQTEDTTTYTSNLVNITHAIALADVDNDDETATLRNYAEGSAIYNLNIANTCGQACHQALAVSAYASEQGYYACQFTGYQDTLLAETGYQVYAGTYIEGAVDFIFGQHARAWFHECDI--RVLEGPSSASITANGRSSESDDSYYVIHKSTVAAADGNDVSSGTY--YLGRP 248
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME_ASPAC (Pectinesterase OS=Aspergillus aculeatus GN=pme1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.003e-14 Identity = 65/230 (28.26%), Postives = 105/230 (45.65%), Query Frame = 2 Query: 77 VDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDS-----TIITRSRSVG--------DGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFG-NAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724 V A GD+TTI DAI+ ++ D I I++G Y+E + +P+ + + G +++ ++T + ++ D TFR+ V +L I N G +QA+AL AD + C+F+GYQDTL + Q Y + G +D+IFG +A Q N+ R+ ITA + + + I ++ A E + A YLGRP Sbjct: 29 VVAKSGGDYTTIGDAIDALSTSTTDTQTIFIEEGTYDEQVYLPAMTGKVIIYGQTENTDSYADNLVTITHAISYEDAGESDDLTATFRNKAVGSQ-----VYNLNIANTCGQACHQALALSAWADQQGYYGCNFTGYQDTLLAQTGNQLYINSYIEGAVDFIFGQHARAWFQ--NVDIRVVEGPTSASITANGRSSETDTSYYVINKSTVAAKEG--DDVAEGTYYLGRP 249
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME1_RALSO (Pectinesterase OS=Ralstonia solanacearum GN=pme PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.301e-11 Identity = 61/195 (31.28%), Postives = 81/195 (41.54%), Query Frame = 2 Query: 77 VDADGTGDFTTITDAINFAPNNSD-DRVVINIKQGVYEENLEIPSYKTNIFLLG---------------------GGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKY-----QAVALRVNADFAALFRCSFSGYQDTLYVHS------FRQFYRECDVYGTIDYIFGNAAVVLQACNI 562 V ADGT + T+ AI+ A N R I++K G+Y E + +P I L G G K + + S + G T RSAT V F AR+LT +N Y AVAL V D A L S G QDTL+V + R +++ + G D+IFG V C I Sbjct: 82 VAADGTAQYKTVQAAIDAAVNAGGVARRYISVKAGIYNELVCVPESAPPITLYGLDANAGNTQIVYNNANPTPASGAKTNPCMGTSSNATVG--TLRSATAMVRASDFHARNLTFKNSYVEGTYADNNQSAVALAVRGDKAILENVSVIGNQDTLFVGATSTTTVIRAYFKNSFIQGDTDFIFGAGTAVFHGCTI 274 The following BLAST results are available for this feature:
BLAST of CF832365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832365 ID=CF832365; Name=CF832365; organism=Citrus sinensis; type=EST; length=732bpback to top |