CF832370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCB2_DICDI (Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Dictyostelium discoideum GN=scsB PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.768e-35 Identity = 82/181 (45.30%), Postives = 113/181 (62.43%), Query Frame = 2 Query: 308 QLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTF-KSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 Q+R LN+HEYQ LM KYG+N K V + KA ++ + ELVVK+Q+ AGGRG G+F ++G KGGVH+ K +E E L +MLG+ LVTKQT +G V V L E + E+YFAI++DRK GP++I +GG IE +AE+ P++I K PID+ GI E + + L Sbjct: 23 QVRYLNLHEYQSKSLMDKYGVNTQKWRVVTKASDAIKAASEL---NGELVVKAQVHAGGRGKGSFIETGFKGGVHLCKTGKEAERLCDEMLGKHLVTKQTTKEGTKVQSVMLAESVDPKRELYFAIVMDRKYGGPVMIASPQGGVDIESVAEETPDLIFKEPIDIVKGIRPEQTKNLAEKL 200
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCB_NEOFR (Succinyl-CoA ligase [GDP-forming] subunit beta, hydrogenosomal OS=Neocallimastix frontalis GN=SCSB PE=2 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 6.717e-35 Identity = 76/176 (43.18%), Postives = 114/176 (64.77%), Query Frame = 2 Query: 299 QQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDA 823 Q Q R L++HEY L+ +Y +N PKG+ + +E +A + + + ++LV+K+Q+LAGGRG G F SGL+GGV + E+V+D A KMLG L+TKQTG G+ + VY+ E+ E YFAI+LDR T GP+++ S+GG IE++A+ P+ I+ VP + G+T E A Sbjct: 21 QTAQKRFLSVHEYCSMNLLHEYNVNAPKGIVAKTPEEAYQAAKKL--NTEDLVIKAQVLAGGRGKGHFDSGLQGGVKLCYTPEQVKDYASKMLGHKLITKQTGAAGRDCNAVYVVERQYAAREYYFAILLDRATRGPVLVASSEGGVEIEEVAKTNPDAILTVPFSIKTGLTREVA 194
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCB2_PIG (Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial (Fragment) OS=Sus scrofa GN=SUCLG2 PE=1 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 1.954e-34 Identity = 85/204 (41.67%), Postives = 121/204 (59.31%), Query Frame = 2 Query: 245 RGLLNKLVSRSLTVAGQWQQQQL---RRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVE-DLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 R LL L R +A + Q QL R LN+ EYQ +LM+ G+ V + + +E +A + + + KE+V+K+QILAGGRG G F SGLKGGVH+ K EV LA +M+G L TKQT +G V+KV + E L + E Y AI++DR GP+++G +GG IE++A P +I K ID+ GI D A ++ + L Sbjct: 11 RKLLRDLAFRPPLLAARSQVVQLTPRRWLNLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKRL--NAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPEVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIEGIKDSQAQRMAENL 212
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCB2_BOVIN (Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Bos taurus GN=SUCLG2 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.552e-34 Identity = 85/204 (41.67%), Postives = 121/204 (59.31%), Query Frame = 2 Query: 245 RGLLNKLVSRSLTVAGQWQQQQL---RRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVE-DLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 R LL LV R +A + Q QL R LN+ EYQ +LM+ G+ V + + +E +A + + + KE+V+K+QILAGGRG G F SGLKGGVH+ K +V LA +M+G L TKQT +G V KV + E L + E Y AI++DR GP+++G +GG IE++A P +I K ID+ GI D A ++ + L Sbjct: 10 RKLLRDLVLRPPLLAARSQVVQLTSRRWLNLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKRL--NAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPKVVGQLAKQMIGYNLATKQTPKEGVKVKKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIEGIKDSQAQRMAENL 211
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCB2_MOUSE (Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Mus musculus GN=Suclg2 PE=2 SV=3) HSP 1 Score: 145.591 bits (366), Expect = 3.334e-34 Identity = 77/178 (43.26%), Postives = 113/178 (63.48%), Query Frame = 2 Query: 314 RRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVE-DLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 R LN+ EYQ +LM+++G+ V + + E +A + + + KE+V+K+QILAGGRG G F SGLKGGVH+ K +V +LA +M+G L TKQT +G V+KV + E L + E Y AI++DR GP+I+G +GG IE++A P +I K ID+F GI D A ++ + L Sbjct: 37 RWLNLQEYQSKKLMSEHGVRVQRFFVANTAKEALEAAKRL--NAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPKVVGELAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSHNGPVIVGSPQGGVDIEEVAASSPELIFKEQIDIFEGIKDSQAQRMAENL 212
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCB2_HUMAN (Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Homo sapiens GN=SUCLG2 PE=1 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 5.686e-34 Identity = 84/202 (41.58%), Postives = 119/202 (58.91%), Query Frame = 2 Query: 251 LLNKLVSRSLTVAGQWQQQQL---RRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVE-DLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 LL L R +A Q QL R LN+ EYQ +LM+ G+ V + + +E +A + + + KE+V+K+QILAGGRG G F SGLKGGVH+ K V LA +M+G L TKQT +G V+KV + E L + E Y AI++DR GP+++G +GG IE++A P +I K ID+F GI D A ++ + L Sbjct: 12 LLRALALRPRFLAAGSQAVQLTSRRWLNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRL--NAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENL 211
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCB_YEAST (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=LSC2 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.401e-32 Identity = 73/181 (40.33%), Postives = 117/181 (64.64%), Query Frame = 2 Query: 305 QQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 Q R L+IHEY+ A+L+ +YGI P+G + +E +A + + + +LV+K+Q L GGRG G F +G K GVH+++ ++ ED+A +ML L+TKQTG GK VS VY+ +++ +E Y +I++DR+T P+II S+GG +IE++AE+ P+ I K I+ G++ + A V L Sbjct: 26 QARRHLSIHEYRSAQLLREYGIGTPEGFPAFTPEEAFEAAKKL--NTNKLVIKAQALTGGRGKGHFDTGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGIAGKPVSAVYIVKRVDTKHEAYLSILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFSIETSKGLSPQMAKDVAKSL 204
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCB1_CAEEL (Probable succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Caenorhabditis elegans GN=F47B10.1 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.322e-32 Identity = 81/196 (41.33%), Postives = 120/196 (61.22%), Query Frame = 2 Query: 251 LLNKLVSRSLTVAGQWQQQQLRRLNIHEYQGAELMAKYGINVPK-GLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKV 832 ++ ++ L + ++ R L +HE+ G +++ Y I VP G+A + +A + K+ VVK+Q+LAGGRG G F SGL+GGV IV +EV+ AG M+G L+TKQT +GK +V +C++L E YF+I LDR T GPI+I S+GG +IE++A P+ IVK+PIDV GIT E A ++ Sbjct: 1 MIGRISQPLLNTSQKFMAPAARTLMLHEHHGMKILQNYEIKVPPFGVAQDAETAFSEAKRI---GGKDYVVKAQVLAGGRGKGRFSSGLQGGVQIVFTPDEVKQKAGMMIGANLITKQTDHRGKKCEEVMVCKRLFTRREYYFSITLDRNTNGPIVIASSQGGVNIEEVAATNPDAIVKMPIDVNVGITKELAHEI 193
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_OCHA4 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=sucC PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.022e-31 Identity = 79/179 (44.13%), Postives = 110/179 (61.45%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 +NIHEYQ L+ YG + G+AV SV++ ++ + + VVKSQI AGGRG G FK + KGGV + K EEV A +MLG LVTKQTGP GK V+++Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA+K+ D L Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTL--PGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGPAGKQVNRLYIEDGADIDRELYLSILIDRTVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDASKLADAL 177
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_OPITP (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Opitutus terrae (strain DSM 11246 / PB90-1) GN=sucC PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.641e-31 Identity = 76/173 (43.93%), Postives = 100/173 (57.80%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVV 835 +NIHEYQ L K+G+ VPKG + +E A + +VVKSQI AGGRG GTF G KGGV + K K E + AGKMLG LVT QTGP G+ V +Y + E Y AI+LDR T+ P+I+ ++GG IE +A P+ I KV +D G+ D ++V Sbjct: 1 MNIHEYQAKALFEKFGVLVPKGAPAKTPEEFVTALAQL--PEGMIVVKSQIHAGGRGKGTFTDGFKGGVKVCKSKAEAREAAGKMLGNTLVTAQTGPAGRKVQTIYFNVGSQIKKEYYLAILLDRATSRPVIVASTEGGMEIEKVAHDTPDRIFKVHVDPAYGLADFQVRELV 171 The following BLAST results are available for this feature:
BLAST of CF832370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832370 ID=CF832370; Name=CF832370; organism=Citrus sinensis; type=EST; length=848bpback to top |