CF832370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_ACISJ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Acidovorax sp. (strain JS42) GN=sucC PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.166e-25 Identity = 67/172 (38.95%), Postives = 101/172 (58.72%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKV 832 + IHEYQG E++ +G+ VP+G+ +V E +A Q + VVK+QI AGGRG G GGV + K ++V+ A ++LG LVT QTGP+G+ V ++Y+ + + NE+Y +++ DR T +I S+GG IE++A P I+ ID GIT E + KV Sbjct: 1 MKIHEYQGKEILRSFGVPVPRGIPAFTVQEAVEAAQKL--GGPVWVVKAQIHAGGRGKG-------GGVKVAKTIDDVKARASEILGMQLVTHQTGPEGQKVRRLYIEDGADIKNELYVSLVTDRGTQKVALIASSEGGMDIEEVAHSTPEKIITEMIDPLTGITPEQSKKV 163
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_RICRS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rickettsia rickettsii (strain Sheila Smith) GN=sucC PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.829e-25 Identity = 65/166 (39.16%), Postives = 97/166 (58.43%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITD 814 +NIHEYQ E++ KYG+ GL V +++ + + + + VVK+QI AGGRG GGV +VK KEE + +A M G LVT QTGPQG+ V+++Y+ ++ E YF+I+ DR + I ++GG IE++AEK P I+K +D G+ D Sbjct: 1 MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINETIDKL--NTEVYVVKAQIHAGGRGKA-------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCEILKEYYFSIVFDRSASCITFIASTEGGVDIEEVAEKTPEKIIKFSVDPATGLQD 157
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_RICRO (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rickettsia rickettsii (strain Iowa) GN=sucC PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.829e-25 Identity = 65/166 (39.16%), Postives = 97/166 (58.43%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITD 814 +NIHEYQ E++ KYG+ GL V +++ + + + + VVK+QI AGGRG GGV +VK KEE + +A M G LVT QTGPQG+ V+++Y+ ++ E YF+I+ DR + I ++GG IE++AEK P I+K +D G+ D Sbjct: 1 MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINETIDKL--NTEVYVVKAQIHAGGRGKA-------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCEILKEYYFSIVFDRSASCITFIASTEGGVDIEEVAEKTPEKIIKFSVDPATGLQD 157
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_RICPU (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rickettsia peacockii (strain Rustic) GN=sucC PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.829e-25 Identity = 65/166 (39.16%), Postives = 97/166 (58.43%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITD 814 +NIHEYQ E++ KYG+ GL V +++ + + + + VVK+QI AGGRG GGV +VK KEE + +A M G LVT QTGPQG+ V+++Y+ ++ E YF+I+ DR + I ++GG IE++AEK P I+K +D G+ D Sbjct: 1 MNIHEYQAKEILRKYGVPTSTGLVVTQTEKINETIDKL--NTEVYVVKAQIHAGGRGKA-------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYFSIVFDRSASCITFIASTEGGVDIEEVAEKTPEKIIKFSVDPATGLQD 157
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_GEOTN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Geobacillus thermodenitrificans (strain NG80-2) GN=sucC PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.829e-25 Identity = 65/164 (39.63%), Postives = 97/164 (59.15%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGI 808 +NIHEYQ E++ YG++VP G +VDE +A + + VVK+QI AGGRG GGV + K EEV A ++LG++LVT QTGP+GK V ++ + E + E Y +++DR T+ +++G +GGT IE++A K P I K +D G+ Sbjct: 1 MNIHEYQAKEILRSYGVSVPNGRVAFTVDEAVEAAKAL--GTSVCVVKAQIHAGGRGKA-------GGVKVAKSLEEVRTYASELLGKVLVTHQTGPEGKEVKRLLIEEGCDIQKEYYIGLVVDRATSRVVLMGSEEGGTEIEEVAAKTPEKIFKEYVDPAVGL 155
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_EXISA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=sucC PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.829e-25 Identity = 68/172 (39.53%), Postives = 101/172 (58.72%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKV 832 +NIHEYQ EL+ ++G+ VP G +V+E A + D + VVK+QI AGGRG GGV + K EEV+ A ++LG+ LVT QTGP+GK+V ++Y+ E ++ E Y ++LDR +I+G S+GG IE++AE P I K +D G+ A ++ Sbjct: 1 MNIHEYQAKELLREFGVAVPTGYPAFTVEEAVAAAAKL--DGEVKVVKAQIHAGGRGKA-------GGVKLAKTDEEVKQYASEILGKTLVTHQTGPEGKVVQRLYIEEGSAIDQEFYLGLVLDRSIGRIVIMGSSEGGMDIEEVAEHTPEKIHKEIVDPVVGLRPFQARRL 163
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_WOLTR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=sucC PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.694e-25 Identity = 69/172 (40.12%), Postives = 96/172 (55.81%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKV 832 +NIHEYQ E++ K+ + VPKG S +E + + D LVVK+QI AGGRG GGV + K EE + MLG LVT QTGP G+ V +VY+ E S+ E Y +I++D K + P I S+GG IE++A+ +P IVK+ ID D+ K+ Sbjct: 1 MNIHEYQAKEILHKFNVPVPKGFVAMSAEEAETKINQLKSD--VLVVKAQIHAGGRGKA-------GGVKLAKSAEEAQQFVKGMLGITLVTHQTGPNGQQVRRVYIEEGSSIKKEYYLSIVIDPKLSRPAFIFSSEGGMDIEEVAKNFPTKIVKLDIDYAADFASFDSRKL 163
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_RICM5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rickettsia massiliae (strain Mtu5) GN=sucC PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.694e-25 Identity = 65/166 (39.16%), Postives = 96/166 (57.83%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITD 814 +NIHEYQ E++ KYG+ GL V +++ + + + VVK+QI AGGRG GGV +VK KEE + +A M G LVT QTGPQG+ V+++Y+ ++ E YF+I+ DR + I ++GG IE++AEK P I+K +D G+ D Sbjct: 1 MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINDTIDKL--NTEVYVVKAQIHAGGRGKA-------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYFSIVFDRSASCITFIASTEGGVDIEEIAEKTPEKIIKFSVDPATGLQD 157
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_RICFE (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rickettsia felis GN=sucC PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.694e-25 Identity = 66/166 (39.76%), Postives = 97/166 (58.43%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITD 814 +NIHEYQ E++ KYG+ GL V +++ + + + + VVK+QI AGGRG GGV +VK KEE + +A M G LVT QTGPQG+ V+++Y+ ++ E YF+I+ DR + I ++GG IE++AEK P IVK +D G+ D Sbjct: 1 MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINETIDKL--NTEVYVVKAQIHAGGRGKA-------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYFSIVFDRLASCITFIASTEGGVDIEEVAEKTPEKIVKFSVDPATGLQD 157
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_RICBR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rickettsia bellii (strain RML369-C) GN=sucC PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.694e-25 Identity = 64/164 (39.02%), Postives = 96/164 (58.54%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGI 808 +NIHEYQ E++ KYG+ G+ V + + A ++ + K VVK+QI AGGRG GGV +VK KEE + +A M G LVT QTGPQG+ V+++Y+ ++ E YF+++ DR + I ++GG IE++AEK P I+K +D G+ Sbjct: 1 MNIHEYQAKEILRKYGVPTSTGVVVTKTESINAAIDEL--NTKVYVVKAQIHAGGRGKA-------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYFSVVFDRSASCITFIASTEGGVDIEEVAEKTPEKIIKFSVDPATGL 155 The following BLAST results are available for this feature:
BLAST of CF832370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832370 ID=CF832370; Name=CF832370; organism=Citrus sinensis; type=EST; length=848bpback to top |