CF832370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_RHOPB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodopseudomonas palustris (strain BisB18) GN=sucC PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.694e-25 Identity = 67/179 (37.43%), Postives = 102/179 (56.98%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 +NIHEYQ ++ +G+++ KG+A+ + + A + + VVKSQI AGGRG G FK +G KGGV + K EEV+ A +MLG LVT QTGP GK V+++Y+ + + E Y ++++DR T+ + ++GG +IED+A P I+ +D GI V L Sbjct: 1 MNIHEYQAKAVLQPFGVSLSKGVAILKATDAEAAAKQL--GGPIWVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSIEEVKQYAAEMLGATLVTIQTGPAGKQVNRLYIEDGSDIEKEFYLSLLVDRVTSRISFVVSTEGGMNIEDVAHDTPEKIISFSVDPATGIMGHHGRTVAKAL 177
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_POLSJ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=sucC PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.694e-25 Identity = 66/176 (37.50%), Postives = 103/176 (58.52%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 + IHEYQG E++ +G+ VP+G+ +V E +A Q + VVK+QI AGGRG G GGV + K ++V+ +AG++LG L T QTGP+G+ V ++Y+ + + E Y + + DR++ I S+GG IE++A P I+KV +D G+TD A +V G+ Sbjct: 1 MKIHEYQGKEILRNFGVPVPRGIPAFTVQEAVEAAQKL--GGPVWVVKAQIHAGGRGKG-------GGVKVAKTIDDVKRIAGEILGMQLKTHQTGPEGQKVRRLYIEDGADIQKEYYVSAVTDRESQKVAFIASSEGGMDIEEVAHSNPEKIIKVFVDPLVGMTDAQAKEVAAGI 167
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_JANSC (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Jannaschia sp. (strain CCS1) GN=sucC PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.694e-25 Identity = 67/166 (40.36%), Postives = 98/166 (59.04%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNG 805 +NIHEYQ L+A+YG V G V ++ K A ++ D VVK+QI AGGRG G FK +G GGV + K +E D A KMLG+ LVT QTGP GK V+++Y+ + + EMY A+++DR+++ + ++GG IE++A P I+ +D G Sbjct: 1 MNIHEYQAKALLAQYGAPVSDGRVVTKAEDAKTAAGEM--DGPLWVVKAQIHAGGRGKGKFKEADAGEAGGVRLAKSAQEAADEAKKMLGRTLVTHQTGPVGKQVNRIYIEDGSGIETEMYLALLVDRQSSRISFVCSTEGGMDIEEVAASTPEKILSFSVDPATG 164
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_SYNFM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=sucC PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.825e-25 Identity = 70/178 (39.33%), Postives = 102/178 (57.30%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDV--FPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 + IHEYQ +L KYG+ +P+G A +V+E K ++ FP +VVK+QI AGGRG G GGV + K EV+ A +LG LVT QTGP+G++V K+ + E L + E+Y +++ DR T+ + + GG IE++A K P I+KV ID G A ++ GL Sbjct: 1 MKIHEYQAKQLFQKYGVPIPRGKAAFTVEEAKAVGAELGTFP----VVVKAQIHAGGRGKG-------GGVKLAKSAAEVDQYAKGILGMTLVTHQTGPEGRLVKKLLVEEGLPIEKELYLSVLPDRGTSKIVFMASEAGGMDIEEVAAKTPEKIIKVFIDPLLGFKGFHANELAYGL 167
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_RICPR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rickettsia prowazekii GN=sucC PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.825e-25 Identity = 64/166 (38.55%), Postives = 95/166 (57.23%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITD 814 +NIHEYQ E++ KYG+ GL V +++ + + + K V+K+QI AGGRG GGV + K KEE + +A M G LVT QTGPQG+ V+++Y+ ++ E YF+I+ DR + I ++GG IE +AEK P I+K +D G+ D Sbjct: 1 MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINETIDKL--NTKVYVIKAQIHAGGRGKA-------GGVKVAKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRIYIESGCDILKEYYFSIVFDRSASCITFIASTEGGVDIEAVAEKMPEKIIKFAVDPATGLQD 157
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_GEOSW (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Geobacillus sp. (strain WCH70) GN=sucC PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.825e-25 Identity = 64/164 (39.02%), Postives = 98/164 (59.76%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGI 808 +NIHEYQ E++ YG++VP G +V+E +A +++ VVK+QI AGGRG GGV + K +EV A ++LG++LVT QTGP+GK V ++ + E + E Y +++DR T+ +++G +GGT IE++A K P I K ID G+ Sbjct: 1 MNIHEYQAKEILRNYGVSVPNGRVAFTVEEAVEAAKEL--GSPVCVVKAQIHAGGRGKA-------GGVKVAKSLDEVRTYASELLGKVLVTHQTGPEGKEVKRLLIEEGCDIKKEYYIGLVVDRATSRVVLMGSEEGGTEIEEVAAKTPEKIFKEYIDPAVGL 155
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_BRASO (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bradyrhizobium sp. (strain ORS278) GN=sucC PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.825e-25 Identity = 67/179 (37.43%), Postives = 102/179 (56.98%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 +NIHEYQ L+ ++G+ + KG+ V ++ A + + VVKSQI AGGRG G FK +G KGGV + K +EV A +MLG LVT QTGP GK V+++Y+ + + E Y ++++DR+T+ + ++GG +IED+A + P IV +D G+ V L Sbjct: 1 MNIHEYQAKALLHEFGVPISKGVPVLRPEDADAAAKTL--GGPVWVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSIDEVNTFARQMLGATLVTVQTGPDGKQVNRLYIEDGSDIDKEFYLSLLVDRETSKVAFVVSTEGGVNIEDVAHETPEKIVTFSVDPATGVMGHHGRAVAKAL 177
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_BDEBA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bdellovibrio bacteriovorus GN=sucC PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.825e-25 Identity = 66/164 (40.24%), Postives = 96/164 (58.54%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGI 808 +NIHEYQ E++ K+G+ KG S +E A +++ VVK+QI AGGRG G GGV + K +EV + KM+G LVT QTGP+GK+V KV++ + ++ E Y A ++DR T ++ S+GG IE++AE P+ I KV ID G+ Sbjct: 1 MNIHEYQAKEVLRKFGVATLKGKLAHSPEEAVAAAKEI--GGSVWVVKAQIHAGGRGKG-------GGVKVAKSLDEVSEFTKKMIGMTLVTHQTGPEGKVVQKVFIEQGCNIAKEYYVACLIDRATGRAAMMASSEGGMDIEEVAEHNPDAIKKVDIDPTVGL 155
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_WOLPM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Wolbachia pipientis wMel GN=sucC PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.302e-25 Identity = 68/159 (42.77%), Postives = 90/159 (56.60%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPID 793 +NIHEYQ E+ K+ + VPKG S +EVK + D VVK+QI AGGRG GGV + K EE + M+G LVT QTGP G+ V KVY+ E S+ E Y ++++D K + PI I S+GG IE++A+ P IVK ID Sbjct: 1 MNIHEYQAKEVFHKFNVPVPKGFVATSAEEVKTQVSQLKSD--VFVVKAQIHAGGRGKA-------GGVKLAKSVEEAQQFVKDMIGMTLVTHQTGPSGQQVRKVYVEEGSSIKKEYYLSLVIDPKLSRPIFIFSSEGGMDIEEVAKNSPAKIVKFDID 150
BLAST of CF832370 vs. ExPASy Swiss-Prot
Match: SUCC_VEREI (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Verminephrobacter eiseniae (strain EF01-2) GN=sucC PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.302e-25 Identity = 68/176 (38.64%), Postives = 99/176 (56.25%), Query Frame = 2 Query: 320 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 844 + IHEYQG +++ ++G+ VP+G+ +V E +A Q + VVK+QI AGGRG G GGV + K +EV LAG MLG L T QTGP+G+ V ++Y+ E + E Y +I+ DR T I S+GG IE++ P MI+ +D G+ E A K+ G+ Sbjct: 1 MKIHEYQGKDILRQFGVPVPRGIPAFTVQEAVEAAQKL--GGPVWVVKAQIHAGGRGKG-------GGVQLAKTIDEVRRLAGSMLGMQLKTHQTGPEGQKVRRLYIEEGADIGKEYYLSIVTDRATQKLAFIASSEGGMDIEEVKRAKPEMIITEFVDPLAGLGPEQALKIAVGI 167 The following BLAST results are available for this feature:
BLAST of CF832370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832370 ID=CF832370; Name=CF832370; organism=Citrus sinensis; type=EST; length=848bpback to top |